| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238923289
Identifier: 238923289
GI number: 238923289
Start: 804515
End: 804946
Strand: Direct
Name: 238923289
Synonym: EUBREC_0900
Alternate gene names: NA
Gene position: 804515-804946 (Clockwise)
Preceding gene: 238923288
Following gene: 238923290
Centisome position: 23.32
GC content: 44.21
Gene sequence:
>432_bases ATGAGTATCATAAGAATGAAATATCCGTTTCTGGATGAAATAGCAAAATATGCTAAAGAGCATCTTCCGGAGGAGGCGTG CGGTCTGATAGCAGGCAGTGAGGACGAAAACGGTCGTCTCATCATAAAGGTATATTACCTGACGAATACAGACCATGCCG AGGACCATTTCACAATGGATCCAAAGGAGCAGCTGGCAGCCATAAAGGACATGAGAGCAAACGGCCTTAAGCCGCTTGGC AACTGGCATTCACATCCGTCTAGCCCTTCAAGGCCATCGGATGAGGATATAAAGCTTGCATACGATCCAAATGCGAGCTA CATGATAATGTCGCTTATGGCAGAAAATCCTGTAATCAACTCGTTTCATATCGAGGGTGGACAGGTCACGAAAGAGGATT TACGAATATATTCTGATGAATATTACTTCTAA
Upstream 100 bases:
>100_bases CGAGCCAATCGACTACGAGCAGGAGGTCTGCGAGGAGACAGCGGGCAGATTTGATGCACCTCGTACACAGGAATAAAAAG ACAGTAAGGAAAGGAACGAT
Downstream 100 bases:
>100_bases ATCATATGTTAATGTTTTGAGTCGCAGCGAAAGCTGCAAAGAAAAGTCAGCTTCATCGAAGATGGCTTTTCTTTTTTAGA GAAAGATGTTATTATAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Mov34/Mpn/Pad-1 Family Protein; Metal-Dependent Protease
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSIIRMKYPFLDEIAKYAKEHLPEEACGLIAGSEDENGRLIIKVYYLTNTDHAEDHFTMDPKEQLAAIKDMRANGLKPLG NWHSHPSSPSRPSDEDIKLAYDPNASYMIMSLMAENPVINSFHIEGGQVTKEDLRIYSDEYYF
Sequences:
>Translated_143_residues MSIIRMKYPFLDEIAKYAKEHLPEEACGLIAGSEDENGRLIIKVYYLTNTDHAEDHFTMDPKEQLAAIKDMRANGLKPLG NWHSHPSSPSRPSDEDIKLAYDPNASYMIMSLMAENPVINSFHIEGGQVTKEDLRIYSDEYYF >Mature_142_residues SIIRMKYPFLDEIAKYAKEHLPEEACGLIAGSEDENGRLIIKVYYLTNTDHAEDHFTMDPKEQLAAIKDMRANGLKPLGN WHSHPSSPSRPSDEDIKLAYDPNASYMIMSLMAENPVINSFHIEGGQVTKEDLRIYSDEYYF
Specific function: Unknown
COG id: COG1310
COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16358; Mature: 16226
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIRMKYPFLDEIAKYAKEHLPEEACGLIAGSEDENGRLIIKVYYLTNTDHAEDHFTMD CCEEECCCCCHHHHHHHHHHCCCHHHHCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCC PKEQLAAIKDMRANGLKPLGNWHSHPSSPSRPSDEDIKLAYDPNASYMIMSLMAENPVIN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCE SFHIEGGQVTKEDLRIYSDEYYF EEECCCCCCCHHHHHEECCCCCC >Mature Secondary Structure SIIRMKYPFLDEIAKYAKEHLPEEACGLIAGSEDENGRLIIKVYYLTNTDHAEDHFTMD CEEECCCCCHHHHHHHHHHCCCHHHHCEEECCCCCCCEEEEEEEEEECCCCCCCCCCCC PKEQLAAIKDMRANGLKPLGNWHSHPSSPSRPSDEDIKLAYDPNASYMIMSLMAENPVIN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCE SFHIEGGQVTKEDLRIYSDEYYF EEECCCCCCCHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA