Click here to switch to the map view.

The map label for this gene is flhO [H]

Identifier: 238923132

GI number: 238923132

Start: 667531

End: 668331

Strand: Direct

Name: flhO [H]

Synonym: EUBREC_0725

Alternate gene names: 238923132

Gene position: 667531-668331 (Clockwise)

Preceding gene: 238923131

Following gene: 238923133

Centisome position: 19.35

GC content: 42.95

Gene sequence:

>801_bases
ATGGTAAAAGGCTTATACACCGCTCACACCGGTATGGTTAATGAGATGAAGCGCATGGATGTTCTTGCGAACAACCTGGC
CAATTCCGATACCTATGGATTTAAAAAAGAGGGAACCACCTCGCATTCATTTAAAAATGAACTTGCTATAAAGATAAAGG
ATACATCAAACTACGGACTGCACAAAAATCTGGGCAGCATGACATACGGAGTGCATCTCGGTGAGACATATACCGACTGG
GATGAGGGCAGCTTTAAGGTGACTGACAATCCTACAGACTTGGCTATCGGTGGAAAAGGCTTTTTTGCCGTTGCATTTAC
TGACAAATCAGGCCAAACAAGTGTAAAGTATACCAGAGACGGTGCTTTCAAGGTCAATGCTGACGGTTATCTGGTCACAG
CAGACGGAGACCATGTGCTCAATGCGACAGGTGCATTGAGTGGAGATGGCGGTGAGGCAAACTGGGTAAAGGTAGACCCG
AATGAGAAGTTTTCGGTAAACTCACTTGGATATATCACACAGAACAATCAGTTAGTTGGCACAATAGGCGTTGTCGATGT
GGATAATTATGACTATATTGAAAAATATGGTGAAAATCTCTACAATCTGACGGCCGGGGGTAATATTATAGCTTCCGATG
CCGAAATAGAACAGGGAGCCTTAGAAACTTCAAATGTCAATGTGGTCAATGAGATGGTCAATATGATTACGATACAGCGT
GCATATGAAGCCGGACAGAAGGTTATTACATCTATTGATGAGACATTAGACAAGGCTGTCAACAATGTAGGAAGAGTATA
A

Upstream 100 bases:

>100_bases
AGTATGCATTCACAACAGGCGACATGACAGAGAAGGATTTTGCCGACAAGGCATCAAAGATAAACGTTATCAACAGAATC
AGATTATAAAGGACAAAAAT

Downstream 100 bases:

>100_bases
GGAGATATGCCATATGATGAGGGCACTTTACACAGCCGCAACAGGTATGCGTGCTGAGCAGACAAATGTAGATACAATTG
CAAACAATCTTTCCAATGTC

Product: flagellar basal body and hook protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGLHKNLGSMTYGVHLGETYTDW
DEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRDGAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDP
NEKFSVNSLGYITQNNQLVGTIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAEIEQGALETSNVNVVNEMVNMITIQR
AYEAGQKVITSIDETLDKAVNNVGRV

Sequences:

>Translated_266_residues
MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGLHKNLGSMTYGVHLGETYTDW
DEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRDGAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDP
NEKFSVNSLGYITQNNQLVGTIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAEIEQGALETSNVNVVNEMVNMITIQR
AYEAGQKVITSIDETLDKAVNNVGRV
>Mature_266_residues
MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGLHKNLGSMTYGVHLGETYTDW
DEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRDGAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDP
NEKFSVNSLGYITQNNQLVGTIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAEIEQGALETSNVNVVNEMVNMITIQR
AYEAGQKVITSIDETLDKAVNNVGRV

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=275, Percent_Identity=33.0909090909091, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787317, Length=274, Percent_Identity=25.9124087591241, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 28773; Mature: 28773

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGL
CCCCEEEHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
HKNLGSMTYGVHLGETYTDWDEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRD
CCCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCEEEEEEECCCCCCEEEEECC
GAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDPNEKFSVNSLGYITQNNQLVG
CCEEECCCCEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCEEECCEEEEEECCEEEE
TIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAEIEQGALETSNVNVVNEMVNMITIQR
EEEEEECCCCHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AYEAGQKVITSIDETLDKAVNNVGRV
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKGLYTAHTGMVNEMKRMDVLANNLANSDTYGFKKEGTTSHSFKNELAIKIKDTSNYGL
CCCCEEEHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
HKNLGSMTYGVHLGETYTDWDEGSFKVTDNPTDLAIGGKGFFAVAFTDKSGQTSVKYTRD
CCCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCEEEEEEECCCCCCEEEEECC
GAFKVNADGYLVTADGDHVLNATGALSGDGGEANWVKVDPNEKFSVNSLGYITQNNQLVG
CCEEECCCCEEEEECCCEEEEECCCCCCCCCCCCEEEECCCCCEEECCEEEEEECCEEEE
TIGVVDVDNYDYIEKYGENLYNLTAGGNIIASDAEIEQGALETSNVNVVNEMVNMITIQR
EEEEEECCCCHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AYEAGQKVITSIDETLDKAVNNVGRV
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]