| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922984
Identifier: 238922984
GI number: 238922984
Start: 534241
End: 535170
Strand: Direct
Name: 238922984
Synonym: EUBREC_0573
Alternate gene names: NA
Gene position: 534241-535170 (Clockwise)
Preceding gene: 238922983
Following gene: 238922985
Centisome position: 15.49
GC content: 40.43
Gene sequence:
>930_bases ATGCAACGCATACAGGAAGGAAAATTTATTATGAAGAAAGCAATATCAGTTCTTATGGTAGCGGCATGTATGTTATGTAT GGTGACAGCATGTGAAAAAAAGGATAAAAAGGAAAATGACACATCAGCAGCTCAGGCAACAGAAACAGATTGCACGGCAG CAGAGCTTGTGACCACAGAGCCGGAAGCTGAAATCACGATATCAGAGATGATAGATCAGAGGATTAAAGAGGAAGGAAAG ATAATGATGTATAGGATGCATTTTGGTCCGTCAAAGACTCCTTTGGAAATAACAGAGGATTTAAACGTAAATATTATATC GTATGACGGGAAAGAACTTATTGATTATGGAAATAGCTCTAATCGCAGAGGGGAGACCAGACTTGGTGACATAATACATA ATAAAGTGGATTATTCAACATATGATATAGGTGCATATGGCGGAAGCTGGAAGCGACATCGTCGTGTGTCTGGTGGAGAC GAAAAGTATGTGGAAGAAGAAGGCTATGTACAGCGCGAAATCACTACAGATGATTCGGGCAATAATACCCAGATGGAGAC ACTGTATTTGTATTCAAAGGGAACTCTTTATACAAGAGAGGAGGGAAGTGAGGTATGGAACCAGACAGAGAAAAACGATA ACCTTCCGGTAGTAGCATTTGGAACATTTGAGAGAATAAAGCTGGATGGAAAAACATATATGACATTCTGTGTAAGAGAT GATTTGAATCTGATAAAGTATATAATAATTCCGGACAATAAATTCACAGAGAACAAGACAGTTGTATATGATACTCCGGG AACGGAGGGGACCACAGTCAATACAGTGGATTACCTCAAAGAATACCAGGCGGTTCCCAAAGAGGAACTGGAGCAGATGA TAGTTTTCCCGGGCAGCAAAAAAGCGGAAAGCTCACAGGCTGCAGATTAA
Upstream 100 bases:
>100_bases AAATTACATCAAGATGAGATTGTTTAGGGCTTTGTGCAACAGAGTAAAGGAATATATGAAGTACATTTTGGAAAACTGAG ATAACAATAAATAGGCATGA
Downstream 100 bases:
>100_bases ATACGGTATGATTGCTTATGCTAACAAGTTTGCAGAGCTCAGACCTTCATTTGTAAAAGGAAAAGAGCTGATCGATGATA TCGCAGCGGCACTTGACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MQRIQEGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAAQATETDCTAAELVTTEPEAEITISEMIDQRIKEEGK IMMYRMHFGPSKTPLEITEDLNVNIISYDGKELIDYGNSSNRRGETRLGDIIHNKVDYSTYDIGAYGGSWKRHRRVSGGD EKYVEEEGYVQREITTDDSGNNTQMETLYLYSKGTLYTREEGSEVWNQTEKNDNLPVVAFGTFERIKLDGKTYMTFCVRD DLNLIKYIIIPDNKFTENKTVVYDTPGTEGTTVNTVDYLKEYQAVPKEELEQMIVFPGSKKAESSQAAD
Sequences:
>Translated_309_residues MQRIQEGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAAQATETDCTAAELVTTEPEAEITISEMIDQRIKEEGK IMMYRMHFGPSKTPLEITEDLNVNIISYDGKELIDYGNSSNRRGETRLGDIIHNKVDYSTYDIGAYGGSWKRHRRVSGGD EKYVEEEGYVQREITTDDSGNNTQMETLYLYSKGTLYTREEGSEVWNQTEKNDNLPVVAFGTFERIKLDGKTYMTFCVRD DLNLIKYIIIPDNKFTENKTVVYDTPGTEGTTVNTVDYLKEYQAVPKEELEQMIVFPGSKKAESSQAAD >Mature_309_residues MQRIQEGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAAQATETDCTAAELVTTEPEAEITISEMIDQRIKEEGK IMMYRMHFGPSKTPLEITEDLNVNIISYDGKELIDYGNSSNRRGETRLGDIIHNKVDYSTYDIGAYGGSWKRHRRVSGGD EKYVEEEGYVQREITTDDSGNNTQMETLYLYSKGTLYTREEGSEVWNQTEKNDNLPVVAFGTFERIKLDGKTYMTFCVRD DLNLIKYIIIPDNKFTENKTVVYDTPGTEGTTVNTVDYLKEYQAVPKEELEQMIVFPGSKKAESSQAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35060; Mature: 35060
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRIQEGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAAQATETDCTAAELVTTE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECC PEAEITISEMIDQRIKEEGKIMMYRMHFGPSKTPLEITEDLNVNIISYDGKELIDYGNSS CCCEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCHHHHHCCCCC NRRGETRLGDIIHNKVDYSTYDIGAYGGSWKRHRRVSGGDEKYVEEEGYVQREITTDDSG CCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEECCCCC NNTQMETLYLYSKGTLYTREEGSEVWNQTEKNDNLPVVAFGTFERIKLDGKTYMTFCVRD CCCEEEEEEEEECCEEEECCCCHHHHHHCCCCCCCCEEEECCEEEEEECCCEEEEEEEEC DLNLIKYIIIPDNKFTENKTVVYDTPGTEGTTVNTVDYLKEYQAVPKEELEQMIVFPGSK CCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHCCCHHHHHHEEECCCCC KAESSQAAD CCCCCCCCC >Mature Secondary Structure MQRIQEGKFIMKKAISVLMVAACMLCMVTACEKKDKKENDTSAAQATETDCTAAELVTTE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEECC PEAEITISEMIDQRIKEEGKIMMYRMHFGPSKTPLEITEDLNVNIISYDGKELIDYGNSS CCCEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEEEECCHHHHHCCCCC NRRGETRLGDIIHNKVDYSTYDIGAYGGSWKRHRRVSGGDEKYVEEEGYVQREITTDDSG CCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCCCHHHHCCCCCEEEEEECCCCC NNTQMETLYLYSKGTLYTREEGSEVWNQTEKNDNLPVVAFGTFERIKLDGKTYMTFCVRD CCCEEEEEEEEECCEEEECCCCHHHHHHCCCCCCCCEEEECCEEEEEECCCEEEEEEEEC DLNLIKYIIIPDNKFTENKTVVYDTPGTEGTTVNTVDYLKEYQAVPKEELEQMIVFPGSK CCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHCCCHHHHHHEEECCCCC KAESSQAAD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA