Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238922983

Identifier: 238922983

GI number: 238922983

Start: 533717

End: 534133

Strand: Direct

Name: 238922983

Synonym: EUBREC_0572

Alternate gene names: NA

Gene position: 533717-534133 (Clockwise)

Preceding gene: 238922982

Following gene: 238922984

Centisome position: 15.47

GC content: 35.01

Gene sequence:

>417_bases
ATGATAAAAAGCGGAGACAGTAAAGAAATAAGACTTAAGGAATTTAGCTATGCGCTGGAGAGAATGGAGAGTTTAAAATC
AGGAAATGAGCTGACTAATAAGATAGTTGAAATACAGGGAACCCAGATACACAGCAAAGGAGACAGCGTGCCGGAAATAG
AGAGCATAAATACTTTTCTGACAACGATTTCATTTGCCGTGGAGGATTTATTTAATAATACATATGAGGTATTGAATAAT
TCGCTAGAGCAGTATATAGCCTCTGATGAAGCGATTGGAAAATTATGGGAACAAATACAGAACGATAATGACGAAAAGGA
CAGTTCGGACCCATTCAAGGATGTAGTTATTAATTTTCAGTCAGGACATGATTATAGATTAAATGAGATATTAGGTGACG
TTAAATTGAAAAAATAA

Upstream 100 bases:

>100_bases
AATTGTATTGTATTTGTATTGTGGCTTTATTTCAAGAGCAGCAGAGCTGCTTTTAAAATAAGACCATAATTTTATACATT
AACAGGAGGACAGAAAAGTC

Downstream 100 bases:

>100_bases
TCCGGAGAAATTACATCAAGATGAGATTGTTTAGGGCTTTGTGCAACAGAGTAAAGGAATATATGAAGTACATTTTGGAA
AACTGAGATAACAATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MIKSGDSKEIRLKEFSYALERMESLKSGNELTNKIVEIQGTQIHSKGDSVPEIESINTFLTTISFAVEDLFNNTYEVLNN
SLEQYIASDEAIGKLWEQIQNDNDEKDSSDPFKDVVINFQSGHDYRLNEILGDVKLKK

Sequences:

>Translated_138_residues
MIKSGDSKEIRLKEFSYALERMESLKSGNELTNKIVEIQGTQIHSKGDSVPEIESINTFLTTISFAVEDLFNNTYEVLNN
SLEQYIASDEAIGKLWEQIQNDNDEKDSSDPFKDVVINFQSGHDYRLNEILGDVKLKK
>Mature_138_residues
MIKSGDSKEIRLKEFSYALERMESLKSGNELTNKIVEIQGTQIHSKGDSVPEIESINTFLTTISFAVEDLFNNTYEVLNN
SLEQYIASDEAIGKLWEQIQNDNDEKDSSDPFKDVVINFQSGHDYRLNEILGDVKLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15737; Mature: 15737

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSGDSKEIRLKEFSYALERMESLKSGNELTNKIVEIQGTQIHSKGDSVPEIESINTFL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH
TTISFAVEDLFNNTYEVLNNSLEQYIASDEAIGKLWEQIQNDNDEKDSSDPFKDVVINFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECC
SGHDYRLNEILGDVKLKK
CCCCEEHHHHHHHHCCCC
>Mature Secondary Structure
MIKSGDSKEIRLKEFSYALERMESLKSGNELTNKIVEIQGTQIHSKGDSVPEIESINTFL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHH
TTISFAVEDLFNNTYEVLNNSLEQYIASDEAIGKLWEQIQNDNDEKDSSDPFKDVVINFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECC
SGHDYRLNEILGDVKLKK
CCCCEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA