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The map label for this gene is xylS [H]

Identifier: 238922911

GI number: 238922911

Start: 461006

End: 463399

Strand: Direct

Name: xylS [H]

Synonym: EUBREC_0499

Alternate gene names: 238922911

Gene position: 461006-463399 (Clockwise)

Preceding gene: 238922910

Following gene: 238922912

Centisome position: 13.36

GC content: 43.86

Gene sequence:

>2394_bases
ATGCAGGAAATATACAGAGTAAAGACAAGTCCGGTGGCATTATCGGACAATATGATAATAGGTGAAAAATACAGGATTAC
AGTTCTGACAGAAGCCCTTGTCCGTCTGGAATACAGTGAAGATGGCGTATTCGAGGATAGGGCAACACAGACAGTATTGT
TCAGGGATTTTCCAAAGACCGGCTATCATGTGGTGCGTAACGCTGATGGAATTGAGGTTCATACATCAATGCTGCACCTG
ATATATAATGAGAAGGAGTTCTCATCACACGGACTGAGTATACAGATTAAGGGAAACCTGAGCGCATATCACAGCATCTG
GCATTATGGCGAGAAGGTGCATGATTTGCAGGGTACAGCGCGTACACTTGATGACGTAAACGGAGAGGTTGAGCTTGGAC
ACGGTGTCGTTTCACGCTTTGGATATTCAATTCTTGATGACAGTAAATCACAGATTTTACTTGACGATGGATGGATTGAG
CCAAGAAAAAAAGGTGTGTCTGATTTGTATTTCTTTGGATACGGACATGATTATAAACAGGCGCTCAATGATTTTTACAG
GCTTTGCGGCAAGACCCCGATGCTTCCGCGATATGCACTGGGAAACTGGTGGAGCAGATATTATAAATACTCAGAAGAAA
GCTATATGGAGCTGATGGACAAATTCGATGAAAAGAACATCCCATTCACGGTAGCGGTAATAGATATGGACTGGCATCAG
GTTGATGTGGACCCTAAATACGGAAGCGGCTGGACAGGATATACCTGGAACAAAAAGCTTTTCCCGGATCCGAAGCGCTT
TCTTGGAAAGCTCCATGACAGAGGAATGCATACTACCCTGAACGTACACCCTGCGGATGGTGTGCAGGGCTGTGAAGAAA
TGTATGTTGATATGGCAAAGGAAATGGGCGTGGACTATGAAAAGGAGGACCCGGTTGTATGTGATCCGGCAAGCCCAAAG
TTTATGGATGCATATTTTAAGTATCTTCATCATCCGAGAGAGGCTGAAGGTGTGGATTTCTGGTGGATTGACTGGCAGCA
GGGCAGCAACTGCAAGGTTGAAGGATTGGATCCGCTATGGATTTTTAATCATTTTCATTATCTCGATAATAAAAGAGACG
GCAGGCGTCCAATGACATTTTCGCGCTATGCAGGTCCGGGAAGCCATAGATATCCGATTGGATTTTCGGGAGATACACAT
ATTACATGGGAGTCGCTTAATTTTCAACCGTATTTTACAACGACAGCGACAAACATCGGATATGGATGGTGGAGCCATGA
TATTGGCGGACATATGCTTGGCTACAAGGATGATGAGCTGACAGCCAGATGGACACAATATGGTATATTCTCTCCGATAA
TGCGTCTGCACAGCTCATGCAGCGAATTTAACGGCAAGGAGCCGTGGCGATTTAAAAAAGAGACTGAGGAAGCGATGGAG
GCGGCGCTCAGACAGAGGCATTGTATGATTCCGTATCTGTATACCATGAACTATCGCAGCTATGCCGAGAATATGCCGCT
GATTGAGCCTATGTATTATGAGTATCCTGAAAATGCAGAGGCTTATGAGGTAAAGAATCAGTATTTCTTTGGCAGCCAGC
TTATGGTAGCACCTGTTACAACTCCACGTATTAAGGGACTTAATGTGGCAAAAACCAAAGTATGGTTCCCGGAGGGCATC
TGGTATGATATCTATACAGGCATGCGCTATGATGGTGGAAGAATGCTGGAGGTTTACAGGGATTTGAGCAGCATACCTGT
GTTTGCGAAGGCGGGAGGCATACTTGTGTGTGCAGATGCTGATGAGCTTGATGCAAGATCTGTTATCAAAAATCCTGATG
TATTATGTGTCAGGGTATTCCCGGAGGCTGATGGTGAGTTTGAGCTATACGAGGATGACAATGAATCCTGCGGATATGTG
GATGGCAGATGTGTGACCACAGCTATGAAATATTCTGCGGATAAAGATATGTTTGTCATTTCTCCGGCAGATGGAGATAC
ATCATTAATACCTGACAACAGAACCTATAAGCTTGTCTTTGAAAGAAGAACCGAGACAGCAGCCGATAAGGTAAAGGTAT
CTGTGGATGGTAAAGAGGTATTGGCAAAGAATAAATATGATAAAGAAAACAGAAAGCTCATCGTTACTGTAAATGCATCG
ACAGCGAGCAAAATAAGCGTTGCAATATCGAAAGACACAGTAGCGCTTGATAATCAAATCGAAAAAAGATGCTTTGATTT
CCTGAATCAGGCAGAGATAGGCTTTGTGCTAAAGGATGAAATCTACGGTCTTATTACATCGGGAAAGAAAACAACAGTGA
TTTTATCAGAGCTCAAGGCAAAGGAGCTTGATACAGAGCTGTATGGTGTATTGACAGAGATACTTACAGCCTGA

Upstream 100 bases:

>100_bases
GGTTTTACTGATATATCTGTTCTTCCAGAAGCAGTTTATCGCAGGAATTGCGGCATCGGCTGTCAAGGGATAGCGTAATT
TATATGAGAGGGAGTATTTC

Downstream 100 bases:

>100_bases
GGCAGTCACCGGTTATACTAGGTGTGACCGGTGACTTTCTTTGTTGTAAAAATTAAAAATGGATGATACTATTATAGTAA
ACGGAAGTATTTTTATAAGA

Product: alpha-xylosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 797; Mature: 797

Protein sequence:

>797_residues
MQEIYRVKTSPVALSDNMIIGEKYRITVLTEALVRLEYSEDGVFEDRATQTVLFRDFPKTGYHVVRNADGIEVHTSMLHL
IYNEKEFSSHGLSIQIKGNLSAYHSIWHYGEKVHDLQGTARTLDDVNGEVELGHGVVSRFGYSILDDSKSQILLDDGWIE
PRKKGVSDLYFFGYGHDYKQALNDFYRLCGKTPMLPRYALGNWWSRYYKYSEESYMELMDKFDEKNIPFTVAVIDMDWHQ
VDVDPKYGSGWTGYTWNKKLFPDPKRFLGKLHDRGMHTTLNVHPADGVQGCEEMYVDMAKEMGVDYEKEDPVVCDPASPK
FMDAYFKYLHHPREAEGVDFWWIDWQQGSNCKVEGLDPLWIFNHFHYLDNKRDGRRPMTFSRYAGPGSHRYPIGFSGDTH
ITWESLNFQPYFTTTATNIGYGWWSHDIGGHMLGYKDDELTARWTQYGIFSPIMRLHSSCSEFNGKEPWRFKKETEEAME
AALRQRHCMIPYLYTMNYRSYAENMPLIEPMYYEYPENAEAYEVKNQYFFGSQLMVAPVTTPRIKGLNVAKTKVWFPEGI
WYDIYTGMRYDGGRMLEVYRDLSSIPVFAKAGGILVCADADELDARSVIKNPDVLCVRVFPEADGEFELYEDDNESCGYV
DGRCVTTAMKYSADKDMFVISPADGDTSLIPDNRTYKLVFERRTETAADKVKVSVDGKEVLAKNKYDKENRKLIVTVNAS
TASKISVAISKDTVALDNQIEKRCFDFLNQAEIGFVLKDEIYGLITSGKKTTVILSELKAKELDTELYGVLTEILTA

Sequences:

>Translated_797_residues
MQEIYRVKTSPVALSDNMIIGEKYRITVLTEALVRLEYSEDGVFEDRATQTVLFRDFPKTGYHVVRNADGIEVHTSMLHL
IYNEKEFSSHGLSIQIKGNLSAYHSIWHYGEKVHDLQGTARTLDDVNGEVELGHGVVSRFGYSILDDSKSQILLDDGWIE
PRKKGVSDLYFFGYGHDYKQALNDFYRLCGKTPMLPRYALGNWWSRYYKYSEESYMELMDKFDEKNIPFTVAVIDMDWHQ
VDVDPKYGSGWTGYTWNKKLFPDPKRFLGKLHDRGMHTTLNVHPADGVQGCEEMYVDMAKEMGVDYEKEDPVVCDPASPK
FMDAYFKYLHHPREAEGVDFWWIDWQQGSNCKVEGLDPLWIFNHFHYLDNKRDGRRPMTFSRYAGPGSHRYPIGFSGDTH
ITWESLNFQPYFTTTATNIGYGWWSHDIGGHMLGYKDDELTARWTQYGIFSPIMRLHSSCSEFNGKEPWRFKKETEEAME
AALRQRHCMIPYLYTMNYRSYAENMPLIEPMYYEYPENAEAYEVKNQYFFGSQLMVAPVTTPRIKGLNVAKTKVWFPEGI
WYDIYTGMRYDGGRMLEVYRDLSSIPVFAKAGGILVCADADELDARSVIKNPDVLCVRVFPEADGEFELYEDDNESCGYV
DGRCVTTAMKYSADKDMFVISPADGDTSLIPDNRTYKLVFERRTETAADKVKVSVDGKEVLAKNKYDKENRKLIVTVNAS
TASKISVAISKDTVALDNQIEKRCFDFLNQAEIGFVLKDEIYGLITSGKKTTVILSELKAKELDTELYGVLTEILTA
>Mature_797_residues
MQEIYRVKTSPVALSDNMIIGEKYRITVLTEALVRLEYSEDGVFEDRATQTVLFRDFPKTGYHVVRNADGIEVHTSMLHL
IYNEKEFSSHGLSIQIKGNLSAYHSIWHYGEKVHDLQGTARTLDDVNGEVELGHGVVSRFGYSILDDSKSQILLDDGWIE
PRKKGVSDLYFFGYGHDYKQALNDFYRLCGKTPMLPRYALGNWWSRYYKYSEESYMELMDKFDEKNIPFTVAVIDMDWHQ
VDVDPKYGSGWTGYTWNKKLFPDPKRFLGKLHDRGMHTTLNVHPADGVQGCEEMYVDMAKEMGVDYEKEDPVVCDPASPK
FMDAYFKYLHHPREAEGVDFWWIDWQQGSNCKVEGLDPLWIFNHFHYLDNKRDGRRPMTFSRYAGPGSHRYPIGFSGDTH
ITWESLNFQPYFTTTATNIGYGWWSHDIGGHMLGYKDDELTARWTQYGIFSPIMRLHSSCSEFNGKEPWRFKKETEEAME
AALRQRHCMIPYLYTMNYRSYAENMPLIEPMYYEYPENAEAYEVKNQYFFGSQLMVAPVTTPRIKGLNVAKTKVWFPEGI
WYDIYTGMRYDGGRMLEVYRDLSSIPVFAKAGGILVCADADELDARSVIKNPDVLCVRVFPEADGEFELYEDDNESCGYV
DGRCVTTAMKYSADKDMFVISPADGDTSLIPDNRTYKLVFERRTETAADKVKVSVDGKEVLAKNKYDKENRKLIVTVNAS
TASKISVAISKDTVALDNQIEKRCFDFLNQAEIGFVLKDEIYGLITSGKKTTVILSELKAKELDTELYGVLTEILTA

Specific function: Catalyzes the liberation of alpha-xylose from the non- reducing terminal glucose of xyloglucan oligosaccharides. Has high hydrolytic activity on the disaccharide isoprimeverose. Follows a retaining mechanism of substrate hydrolysis [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI66346737, Length=517, Percent_Identity=25.1450676982592, Blast_Score=153, Evalue=5e-37,
Organism=Homo sapiens, GI88900491, Length=546, Percent_Identity=23.0769230769231, Blast_Score=150, Evalue=6e-36,
Organism=Homo sapiens, GI38202257, Length=546, Percent_Identity=23.0769230769231, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI119393895, Length=573, Percent_Identity=23.7347294938918, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI119393893, Length=573, Percent_Identity=23.7347294938918, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI119393891, Length=573, Percent_Identity=23.7347294938918, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI221316699, Length=540, Percent_Identity=22.4074074074074, Blast_Score=93, Evalue=1e-18,
Organism=Homo sapiens, GI310115361, Length=261, Percent_Identity=24.1379310344828, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI157364974, Length=233, Percent_Identity=23.6051502145923, Blast_Score=81, Evalue=5e-15,
Organism=Escherichia coli, GI2367256, Length=456, Percent_Identity=24.780701754386, Blast_Score=139, Evalue=7e-34,
Organism=Escherichia coli, GI2367323, Length=245, Percent_Identity=24.8979591836735, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560800, Length=596, Percent_Identity=22.4832214765101, Blast_Score=135, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17560798, Length=596, Percent_Identity=22.4832214765101, Blast_Score=135, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71991189, Length=511, Percent_Identity=23.4833659491194, Blast_Score=126, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71985706, Length=266, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32563849, Length=271, Percent_Identity=26.5682656826568, Blast_Score=91, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6319706, Length=363, Percent_Identity=26.7217630853994, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24643749, Length=547, Percent_Identity=24.1316270566728, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24643753, Length=547, Percent_Identity=24.1316270566728, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24643751, Length=547, Percent_Identity=24.1316270566728, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI24643746, Length=547, Percent_Identity=24.1316270566728, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21357605, Length=547, Percent_Identity=24.1316270566728, Blast_Score=133, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 91754; Mature: 91754

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIYRVKTSPVALSDNMIIGEKYRITVLTEALVRLEYSEDGVFEDRATQTVLFRDFPKT
CCCCEEECCCCEEECCCEEECCEEEEEEEEHHHHEEECCCCCCCCCCCCEEEEEECCCCC
GYHVVRNADGIEVHTSMLHLIYNEKEFSSHGLSIQIKGNLSAYHSIWHYGEKVHDLQGTA
CEEEEECCCCCCHHHHHHHHHCCCCHHCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCHH
RTLDDVNGEVELGHGVVSRFGYSILDDSKSQILLDDGWIEPRKKGVSDLYFFGYGHDYKQ
HHHHHCCCCEEECCHHHHHCCCCEECCCCCEEEEECCCCCHHHCCCCEEEEEECCCHHHH
ALNDFYRLCGKTPMLPRYALGNWWSRYYKYSEESYMELMDKFDEKNIPFTVAVIDMDWHQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEE
VDVDPKYGSGWTGYTWNKKLFPDPKRFLGKLHDRGMHTTLNVHPADGVQGCEEMYVDMAK
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
EMGVDYEKEDPVVCDPASPKFMDAYFKYLHHPREAEGVDFWWIDWQQGSNCKVEGLDPLW
HHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCCEEE
IFNHFHYLDNKRDGRRPMTFSRYAGPGSHRYPIGFSGDTHITWESLNFQPYFTTTATNIG
EEHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCC
YGWWSHDIGGHMLGYKDDELTARWTQYGIFSPIMRLHSSCSEFNGKEPWRFKKETEEAME
CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AALRQRHCMIPYLYTMNYRSYAENMPLIEPMYYEYPENAEAYEVKNQYFFGSQLMVAPVT
HHHHHCCCCCEEEEEECHHHHHCCCCCCCCHHCCCCCCCCEEEECCCEEECCEEEEEECC
TPRIKGLNVAKTKVWFPEGIWYDIYTGMRYDGGRMLEVYRDLSSIPVFAKAGGILVCADA
CCCCCCCEEEEEEEECCCCCEEEEECCEEECCCHHHHHHHHHHHCCEEECCCCEEEEECC
DELDARSVIKNPDVLCVRVFPEADGEFELYEDDNESCGYVDGRCVTTAMKYSADKDMFVI
CCCCHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCEEEE
SPADGDTSLIPDNRTYKLVFERRTETAADKVKVSVDGKEVLAKNKYDKENRKLIVTVNAS
ECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHCCCCCCCCCEEEEEEECC
TASKISVAISKDTVALDNQIEKRCFDFLNQAEIGFVLKDEIYGLITSGKKTTVILSELKA
CCCEEEEEEECCCEEHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCEEEEEHHHHHH
KELDTELYGVLTEILTA
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQEIYRVKTSPVALSDNMIIGEKYRITVLTEALVRLEYSEDGVFEDRATQTVLFRDFPKT
CCCCEEECCCCEEECCCEEECCEEEEEEEEHHHHEEECCCCCCCCCCCCEEEEEECCCCC
GYHVVRNADGIEVHTSMLHLIYNEKEFSSHGLSIQIKGNLSAYHSIWHYGEKVHDLQGTA
CEEEEECCCCCCHHHHHHHHHCCCCHHCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCHH
RTLDDVNGEVELGHGVVSRFGYSILDDSKSQILLDDGWIEPRKKGVSDLYFFGYGHDYKQ
HHHHHCCCCEEECCHHHHHCCCCEECCCCCEEEEECCCCCHHHCCCCEEEEEECCCHHHH
ALNDFYRLCGKTPMLPRYALGNWWSRYYKYSEESYMELMDKFDEKNIPFTVAVIDMDWHQ
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCEE
VDVDPKYGSGWTGYTWNKKLFPDPKRFLGKLHDRGMHTTLNVHPADGVQGCEEMYVDMAK
EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
EMGVDYEKEDPVVCDPASPKFMDAYFKYLHHPREAEGVDFWWIDWQQGSNCKVEGLDPLW
HHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCCEEE
IFNHFHYLDNKRDGRRPMTFSRYAGPGSHRYPIGFSGDTHITWESLNFQPYFTTTATNIG
EEHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCC
YGWWSHDIGGHMLGYKDDELTARWTQYGIFSPIMRLHSSCSEFNGKEPWRFKKETEEAME
CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AALRQRHCMIPYLYTMNYRSYAENMPLIEPMYYEYPENAEAYEVKNQYFFGSQLMVAPVT
HHHHHCCCCCEEEEEECHHHHHCCCCCCCCHHCCCCCCCCEEEECCCEEECCEEEEEECC
TPRIKGLNVAKTKVWFPEGIWYDIYTGMRYDGGRMLEVYRDLSSIPVFAKAGGILVCADA
CCCCCCCEEEEEEEECCCCCEEEEECCEEECCCHHHHHHHHHHHCCEEECCCCEEEEECC
DELDARSVIKNPDVLCVRVFPEADGEFELYEDDNESCGYVDGRCVTTAMKYSADKDMFVI
CCCCHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEHHCCCCCCEEEE
SPADGDTSLIPDNRTYKLVFERRTETAADKVKVSVDGKEVLAKNKYDKENRKLIVTVNAS
ECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECHHHHHHCCCCCCCCCEEEEEEECC
TASKISVAISKDTVALDNQIEKRCFDFLNQAEIGFVLKDEIYGLITSGKKTTVILSELKA
CCCEEEEEEECCCEEHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCEEEEEHHHHHH
KELDTELYGVLTEILTA
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10801892; 11427726 [H]