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The map label for this gene is yurN [H]

Identifier: 238922909

GI number: 238922909

Start: 459266

End: 460144

Strand: Direct

Name: yurN [H]

Synonym: EUBREC_0497

Alternate gene names: 238922909

Gene position: 459266-460144 (Clockwise)

Preceding gene: 238922908

Following gene: 238922910

Centisome position: 13.31

GC content: 39.36

Gene sequence:

>879_bases
ATGTTTAAAAAATCACATCCATTACAAAGTAAGAGTGAAATAATTTTAAGAAACATAGTTGTTGTAGCTATGGTAGCTTT
CTTTACAATATTTTTGATAATACCAATCGGTATAGCATTTGCAGGAAGCTTTCATGAGTGGAACCCGTTAAGCGGAACAT
ACAAGTTTTTAGGTCTGGAAAATTATAAGCAGGTGTTCACGAGCAAATTGTTCGGTAAATCAATGTTCAATACCGTAATT
TTTTCGGTAGTTGTAATTGTTTTCAGAGTTGGTCTGGGACTGGGAATCGCGTATGCTATTTATTCAACGCTTATAAAGCA
TAAGAGTTTTTTCAGGGCAGTTTACTATATGCCTGTAGTAACGCCTATGGTTGCAGTGGCATTTGTATGGAAGTTCATGT
ACAATCCACAGATCGGAACCATCAACAAAATATTCGGGCTCGATATCAACTGGCTGATGAATCCCAAAACTGCTCTGATT
GCAGTAATGATAATGACCATCTGGAAGGATTTTGGATATGCGGTTGTCATGTATATGGCAGGCCTGTACTCACTTCCGGC
AGATGTCATGGAGGCAGCACAGGTTGACGGAGCGAGTGGCTGGCAGAAATTCAGATACATTACATTGCCGTTGCTTAAGC
CTATGACACTTTTTGTAGTCATTACATCAATTATTTCGTATATCCAGGCATATGTTCAGATACTCATCATGACAGAGGGT
GGACCGGGAACATCAACATATCTGGCTTCTTACATTATTTACGATGAGGCCTTTGTCAAATACAACTTTGGATATGCATC
AGCACTTTCATTTGTGCTTTTTGTGATTACCGCAGTGCTTACCGTGCTTTCTTTCAAAGTATCGGGCAAGGAAGAGTAG

Upstream 100 bases:

>100_bases
TGATATTATAAAGGATATGAAGAGCAGTTCATTCCAATCAGTCGAGAATCTATATGAGTTTGCAAAATAACATGTAGAGA
TTCACTACGGAGGATTATTA

Downstream 100 bases:

>100_bases
GAGGAGAATATCATGAGAAAAAAAGTAAGCAGTATAGTTTTAAATGTATTCCTTCTATTATTGGGCATTGTTACAGTTTA
TCCGTTTATATGGATGCTAT

Product: ABC-type sugar transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MFKKSHPLQSKSEIILRNIVVVAMVAFFTIFLIIPIGIAFAGSFHEWNPLSGTYKFLGLENYKQVFTSKLFGKSMFNTVI
FSVVVIVFRVGLGLGIAYAIYSTLIKHKSFFRAVYYMPVVTPMVAVAFVWKFMYNPQIGTINKIFGLDINWLMNPKTALI
AVMIMTIWKDFGYAVVMYMAGLYSLPADVMEAAQVDGASGWQKFRYITLPLLKPMTLFVVITSIISYIQAYVQILIMTEG
GPGTSTYLASYIIYDEAFVKYNFGYASALSFVLFVITAVLTVLSFKVSGKEE

Sequences:

>Translated_292_residues
MFKKSHPLQSKSEIILRNIVVVAMVAFFTIFLIIPIGIAFAGSFHEWNPLSGTYKFLGLENYKQVFTSKLFGKSMFNTVI
FSVVVIVFRVGLGLGIAYAIYSTLIKHKSFFRAVYYMPVVTPMVAVAFVWKFMYNPQIGTINKIFGLDINWLMNPKTALI
AVMIMTIWKDFGYAVVMYMAGLYSLPADVMEAAQVDGASGWQKFRYITLPLLKPMTLFVVITSIISYIQAYVQILIMTEG
GPGTSTYLASYIIYDEAFVKYNFGYASALSFVLFVITAVLTVLSFKVSGKEE
>Mature_292_residues
MFKKSHPLQSKSEIILRNIVVVAMVAFFTIFLIIPIGIAFAGSFHEWNPLSGTYKFLGLENYKQVFTSKLFGKSMFNTVI
FSVVVIVFRVGLGLGIAYAIYSTLIKHKSFFRAVYYMPVVTPMVAVAFVWKFMYNPQIGTINKIFGLDINWLMNPKTALI
AVMIMTIWKDFGYAVVMYMAGLYSLPADVMEAAQVDGASGWQKFRYITLPLLKPMTLFVVITSIISYIQAYVQILIMTEG
GPGTSTYLASYIIYDEAFVKYNFGYASALSFVLFVITAVLTVLSFKVSGKEE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=261, Percent_Identity=29.8850574712644, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787570, Length=239, Percent_Identity=29.2887029288703, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=28.6852589641434, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32823; Mature: 32823

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]