| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yxiO [H]
Identifier: 238922820
GI number: 238922820
Start: 374167
End: 375561
Strand: Direct
Name: yxiO [H]
Synonym: EUBREC_0408
Alternate gene names: 238922820
Gene position: 374167-375561 (Clockwise)
Preceding gene: 238922819
Following gene: 238922821
Centisome position: 10.85
GC content: 40.79
Gene sequence:
>1395_bases ATGAAATCAAAAGAAGACAATACACAAAAGAAAACCAAAAAGCTCTCATCAAAGGAGCTCTCATGGGTATTATATGATGT GGGAAATTCCGCATACACACTGCTTGCGTGTGCGCTCATACCGATATGGTACAAAAGCCTTGCCGTTGGAGATGGTGCAG GGCAGATTTCATCTGACAGGGCAACCGCGTATTATGCGGTGGCAATAGCTGTGATGACAGTTGTATCAGCACTTATCGGG CCTGTCTGTGGTGCGATAGCAGACCATATGCGCATCAAAAAGGCTATTTTTTCAACGACCGTAGTTGTAGGAGTGTCGGC ATGTATACTTAACGGTTTTACACCTACATGGGTGCTGTTTCTTGTTATCTATGTGCTTACAAAGATATTTTACAATGCAT CGCTGGTGTTTTATGACTCGATGCTTGTCGATGTGACGACAAAGGATAGAATGGACGAGGTGTCTTCCTACGGCTATGCC TGGGGATATCTGGGCTCGTGTGTGCCGTTTCTTGTTTCACTTGCAGCGTACATCTGTGGACCGGATATGCTTGGATACAT ATCAAACCGCCTATCGATGATAATAGGCTTTGCGGTTACAGGAATTTGGTGGTTTGTTGTTACAATTCCATTGTTTAAGA GCTATAAACAGGTGAATTATGTATCGGATGCAGCAGATAAAGATATTCATAAGAATTTTGAAAATGATGCATTTATAAGA GACAATATCAAAGAGAAAAACAAAACAAACAAAAATCCGGGAGTCCTAAGACTTATAGCTGACGCATTTGCACAGATTTT TGGAACAATCAAAAAAATAGCTACAAAAGATAAAAAAGTAGGACTGTTTTTGGTTGCTTTTTTCCTTTACATAGATGGTG TAGGTACTATAATAGATAACTGTATAAACATAGGAACTGATTTAAAGCTCGATTCAGTGGGACAGGTAGTGTTTTTACTT TTTACACAGATAGTGGCATGCATCGGTTCACTTGTTTTTGGAAGACTGTCACAGACATACAAAACTACAACACTTTTGTA TGTCTGCATTGCGGGATATTTTGCAGTTTGTCTATATGCACTTACACTGCATGATATGATTGGCTTTGGAATCATGGCGT TTGGTGTGGGATGCTTCCAGGGCTCATTGCAGGCGCTGTCACGCTCATATTTTTCAAAGATTATTCCTCCTGAGAACTCG GGAGAGTATTTCGGAATCTATGATATTTTTGCAAAAGGAGCTTCGTTTTTAGGCTCGCTTGTCATAGCGGCAGTAAAGCT TGCGGGCGGCACGATAAATGTGGCGGTTGCAACTATGGCAATATTCTTTGCAGTGGGATTTGTATTTTTAAGGCTTGCAG ACAGATATGATGCACCGAGGCATGAAAATAACTAA
Upstream 100 bases:
>100_bases CGGATTATTTACATAAACTTTGCAAATGGGTGGTAGCGGTTTTTACATAAAAAAAATAAAATCGTAGTCTGAGGAATACA AAACAGGGAAGGTATAATTT
Downstream 100 bases:
>100_bases AATAAAAAGTAACGAAAGAAGGCTTAAAGCATGATAAACACAGAGGGAACAAAGGTCTGGGCACACAGAGGAGCATCCGG ATATGCACCGGAGAACACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKSKEDNTQKKTKKLSSKELSWVLYDVGNSAYTLLACALIPIWYKSLAVGDGAGQISSDRATAYYAVAIAVMTVVSALIG PVCGAIADHMRIKKAIFSTTVVVGVSACILNGFTPTWVLFLVIYVLTKIFYNASLVFYDSMLVDVTTKDRMDEVSSYGYA WGYLGSCVPFLVSLAAYICGPDMLGYISNRLSMIIGFAVTGIWWFVVTIPLFKSYKQVNYVSDAADKDIHKNFENDAFIR DNIKEKNKTNKNPGVLRLIADAFAQIFGTIKKIATKDKKVGLFLVAFFLYIDGVGTIIDNCINIGTDLKLDSVGQVVFLL FTQIVACIGSLVFGRLSQTYKTTTLLYVCIAGYFAVCLYALTLHDMIGFGIMAFGVGCFQGSLQALSRSYFSKIIPPENS GEYFGIYDIFAKGASFLGSLVIAAVKLAGGTINVAVATMAIFFAVGFVFLRLADRYDAPRHENN
Sequences:
>Translated_464_residues MKSKEDNTQKKTKKLSSKELSWVLYDVGNSAYTLLACALIPIWYKSLAVGDGAGQISSDRATAYYAVAIAVMTVVSALIG PVCGAIADHMRIKKAIFSTTVVVGVSACILNGFTPTWVLFLVIYVLTKIFYNASLVFYDSMLVDVTTKDRMDEVSSYGYA WGYLGSCVPFLVSLAAYICGPDMLGYISNRLSMIIGFAVTGIWWFVVTIPLFKSYKQVNYVSDAADKDIHKNFENDAFIR DNIKEKNKTNKNPGVLRLIADAFAQIFGTIKKIATKDKKVGLFLVAFFLYIDGVGTIIDNCINIGTDLKLDSVGQVVFLL FTQIVACIGSLVFGRLSQTYKTTTLLYVCIAGYFAVCLYALTLHDMIGFGIMAFGVGCFQGSLQALSRSYFSKIIPPENS GEYFGIYDIFAKGASFLGSLVIAAVKLAGGTINVAVATMAIFFAVGFVFLRLADRYDAPRHENN >Mature_464_residues MKSKEDNTQKKTKKLSSKELSWVLYDVGNSAYTLLACALIPIWYKSLAVGDGAGQISSDRATAYYAVAIAVMTVVSALIG PVCGAIADHMRIKKAIFSTTVVVGVSACILNGFTPTWVLFLVIYVLTKIFYNASLVFYDSMLVDVTTKDRMDEVSSYGYA WGYLGSCVPFLVSLAAYICGPDMLGYISNRLSMIIGFAVTGIWWFVVTIPLFKSYKQVNYVSDAADKDIHKNFENDAFIR DNIKEKNKTNKNPGVLRLIADAFAQIFGTIKKIATKDKKVGLFLVAFFLYIDGVGTIIDNCINIGTDLKLDSVGQVVFLL FTQIVACIGSLVFGRLSQTYKTTTLLYVCIAGYFAVCLYALTLHDMIGFGIMAFGVGCFQGSLQALSRSYFSKIIPPENS GEYFGIYDIFAKGASFLGSLVIAAVKLAGGTINVAVATMAIFFAVGFVFLRLADRYDAPRHENN
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319811, Length=241, Percent_Identity=24.4813278008299, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50764; Mature: 50764
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKEDNTQKKTKKLSSKELSWVLYDVGNSAYTLLACALIPIWYKSLAVGDGAGQISSDR CCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ATAYYAVAIAVMTVVSALIGPVCGAIADHMRIKKAIFSTTVVVGVSACILNGFTPTWVLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LVIYVLTKIFYNASLVFYDSMLVDVTTKDRMDEVSSYGYAWGYLGSCVPFLVSLAAYICG HHHHHHHHHHHCCHHEEEHHHHEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PDMLGYISNRLSMIIGFAVTGIWWFVVTIPLFKSYKQVNYVSDAADKDIHKNFENDAFIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH DNIKEKNKTNKNPGVLRLIADAFAQIFGTIKKIATKDKKVGLFLVAFFLYIDGVGTIIDN HCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH CINIGTDLKLDSVGQVVFLLFTQIVACIGSLVFGRLSQTYKTTTLLYVCIAGYFAVCLYA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLHDMIGFGIMAFGVGCFQGSLQALSRSYFSKIIPPENSGEYFGIYDIFAKGASFLGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH VIAAVKLAGGTINVAVATMAIFFAVGFVFLRLADRYDAPRHENN HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKSKEDNTQKKTKKLSSKELSWVLYDVGNSAYTLLACALIPIWYKSLAVGDGAGQISSDR CCCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ATAYYAVAIAVMTVVSALIGPVCGAIADHMRIKKAIFSTTVVVGVSACILNGFTPTWVLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LVIYVLTKIFYNASLVFYDSMLVDVTTKDRMDEVSSYGYAWGYLGSCVPFLVSLAAYICG HHHHHHHHHHHCCHHEEEHHHHEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PDMLGYISNRLSMIIGFAVTGIWWFVVTIPLFKSYKQVNYVSDAADKDIHKNFENDAFIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH DNIKEKNKTNKNPGVLRLIADAFAQIFGTIKKIATKDKKVGLFLVAFFLYIDGVGTIIDN HCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH CINIGTDLKLDSVGQVVFLLFTQIVACIGSLVFGRLSQTYKTTTLLYVCIAGYFAVCLYA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLHDMIGFGIMAFGVGCFQGSLQALSRSYFSKIIPPENSGEYFGIYDIFAKGASFLGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH VIAAVKLAGGTINVAVATMAIFFAVGFVFLRLADRYDAPRHENN HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]