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The map label for this gene is yrdA [C]

Identifier: 238922819

GI number: 238922819

Start: 373595

End: 374059

Strand: Direct

Name: yrdA [C]

Synonym: EUBREC_0407

Alternate gene names: 238922819

Gene position: 373595-374059 (Clockwise)

Preceding gene: 238922818

Following gene: 238922820

Centisome position: 10.83

GC content: 47.31

Gene sequence:

>465_bases
ATGGCATATTATATAGCAGAAGGTGCCGTTGTTAAGGGTCAGGTGACAATGGCTGACGGAGCAAGCGTATGGTATAATGC
AACTGTAAGAGGCGATTCAGAACCGATAGAAATAGGCAGAAATTCGAATATACAGGACAATGCAGTGGTACATGTGGACT
TAAGCCACAGTGTCAGAATTGGTGACAATGTGACAATAGGACACAGCGCAATTGTTCACGGGTGTACTATAGGTGATAAT
ACACTCATCGGCATGGGTGCCATCGTGCTAAATGGAGCAAGGATTGGTAAAAACTGCATAATAGGTGCGGGCGCTCTTGT
CACCCAGGGCACCGATATTCCTGACGGAAGCCTCGCATTTGGTTCTCCGGCAAAGGTGATCAGGGCACTGACCGCTGATG
AGATAGAGGAGAATCATCGCAATGCCATGCATTATGTGGAGATTGCGAGGGAGTCGCTGATTTAA

Upstream 100 bases:

>100_bases
GAAATGTGGACTGTGTCTATGGCTTCAGGCGGCATAATAATCAGATTTCTATGATGCATATAGACAAGGGCGATTATCTG
AAATTGATGGAGGGATAGAT

Downstream 100 bases:

>100_bases
TATTGGACGGATTATTTACATAAACTTTGCAAATGGGTGGTAGCGGTTTTTACATAAAAAAAATAAAATCGTAGTCTGAG
GAATACAAAACAGGGAAGGT

Product: putative acetyltransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MAYYIAEGAVVKGQVTMADGASVWYNATVRGDSEPIEIGRNSNIQDNAVVHVDLSHSVRIGDNVTIGHSAIVHGCTIGDN
TLIGMGAIVLNGARIGKNCIIGAGALVTQGTDIPDGSLAFGSPAKVIRALTADEIEENHRNAMHYVEIARESLI

Sequences:

>Translated_154_residues
MAYYIAEGAVVKGQVTMADGASVWYNATVRGDSEPIEIGRNSNIQDNAVVHVDLSHSVRIGDNVTIGHSAIVHGCTIGDN
TLIGMGAIVLNGARIGKNCIIGAGALVTQGTDIPDGSLAFGSPAKVIRALTADEIEENHRNAMHYVEIARESLI
>Mature_153_residues
AYYIAEGAVVKGQVTMADGASVWYNATVRGDSEPIEIGRNSNIQDNAVVHVDLSHSVRIGDNVTIGHSAIVHGCTIGDNT
LIGMGAIVLNGARIGKNCIIGAGALVTQGTDIPDGSLAFGSPAKVIRALTADEIEENHRNAMHYVEIARESLI

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=156, Percent_Identity=39.7435897435897, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI1787667, Length=142, Percent_Identity=40.8450704225352, Blast_Score=106, Evalue=7e-25,
Organism=Escherichia coli, GI87081681, Length=162, Percent_Identity=31.4814814814815, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 16136; Mature: 16005

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYIAEGAVVKGQVTMADGASVWYNATVRGDSEPIEIGRNSNIQDNAVVHVDLSHSVRI
CEEEEECCEEEEEEEEEECCCEEEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCEEE
GDNVTIGHSAIVHGCTIGDNTLIGMGAIVLNGARIGKNCIIGAGALVTQGTDIPDGSLAF
CCCEEECCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEECCEEEECCCCCCCCCEEC
GSPAKVIRALTADEIEENHRNAMHYVEIARESLI
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYYIAEGAVVKGQVTMADGASVWYNATVRGDSEPIEIGRNSNIQDNAVVHVDLSHSVRI
EEEEECCEEEEEEEEEECCCEEEEEEEECCCCCCEEECCCCCCCCCEEEEEECCCCEEE
GDNVTIGHSAIVHGCTIGDNTLIGMGAIVLNGARIGKNCIIGAGALVTQGTDIPDGSLAF
CCCEEECCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEECCEEEECCCCCCCCCEEC
GSPAKVIRALTADEIEENHRNAMHYVEIARESLI
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]