| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922816
Identifier: 238922816
GI number: 238922816
Start: 367964
End: 369499
Strand: Direct
Name: 238922816
Synonym: EUBREC_0404
Alternate gene names: NA
Gene position: 367964-369499 (Clockwise)
Preceding gene: 238922815
Following gene: 238922817
Centisome position: 10.67
GC content: 40.49
Gene sequence:
>1536_bases ATGTATATGGCGAAAAACGTGGGGATATGTTATTATATGAGTATGACATTAAAAGATAGAATACCAAAAGAATTTTATAG CTTATTCCGCACGAAAAATATGGATGCATACATGCAGATAGTTGTTGCGTTATATGAGGAGAATAACGAGGTCTATGCAT CACTGGGACTGACACGTGAGGAGTGTCAGATAATCATAGCGGATACCATATCAAAAACAGGCATTGTATGGCAGACTGAT TATAATGAAGATGAGAGTGATAAAGATAGTGGCAGCATGGATAATCATGATGATTATAATCCTGATTCCGAAATTGATGT TATATATGACCAGGCCACTTTCGCATACACCCTGACACCATCAGCTATATTGGGCAGGCTTATAAACTGGGGCTGGATCA GGAGTGATTTTGATGAAAAGCTCAACACATATGTGATTGCATTTCCTCAGTACAGCCAGATGTATGCTGAGCTATTTAAA AAGCTGCTTGTGGATGATGACAGCAGGGAGCGCGAGAGCATTTTGGCTGTTTACAGTGCGCTTTTTACATATTTTTCAGA TCCGGAAAAAAATAATGATATTCTGAAAAATGCGTTGTATACGTCAAAAAATCTTGGTCAGCTTTTATCAAATATGCAGG ATGGTATGAGGGCATATTTTGATGAGCTGTCACGTATGAAGGATTTTATAGGTATACAGAAGGTGCTGATTAAGGAAATT AATAACAGTGATAGCAGACGTTATGCCATCCTTACAACCACGGATAGCTTTTATCGTTACAAGGAGGCTGTAAAGGAGCT TATAAGTAAAATCCTTAATCAGAACGATGATAGGAGGGCTGAGCTTGAGGGAATTCTTTCGCAGACTACACCCGGTACGT TTGAGAGAAAACGCTATGAGTACAGCGTGGAGTACTGTGATAAGGCAAGTGAGCTTGTCTATAAGGTGGAGCATGAGTTT GACCTGATTGAGAGAAAGTACAACAAGCTTATTGAGCAGAAGACGATTTTTGCAAAGAGGGCGCTTGCAAGGATACACTA TATCCTGCAGGAAGGCGCAGATGACGAGGATAATATAGTAAAGCTCATTAACCTGATAGATAAGAGTGATAAAACAGATG AGATACTTGGGGCTCTTCGAAACAGAATGAAGTTCACCAGACAGTTTTACAATGTAACGGACGACAGTTTTCCGGGAAGA AGAGAGAGAGGAAGAAGTGAGTTTGTTCCGTTTGTTATTGACGATGCTTCGGCAGGCGAAGATGATATGGCAGATTTTGT GCCAAAGCCATTGTATACCAAAAAGGAGCTTCAAAGCTTCAGAGATAAAAATATGCGTGATGGCATGTTTGTGACAGATG AACAAACTGTAGAATCCATGGAGGATCTGGAAAAGCTTCTGTTTTTATGGCAGGAGGAGACCAATGAGCGCATGGGTGAG GATACGGTGAGTCTGGATGGAGAGATAACAAAGAGTGATGGTGTAAGCTACTCAAGGCTTGTAATATCCAAATCGGACTC TAAACGAGAAGCATAG
Upstream 100 bases:
>100_bases TTATTGATGGTCACAATCAGGAGTGATTTGATGGTAACCGGATGTTACTGTTAAGACTGAGGTGTGAAGCAGCAATATTA ATATCCCCACGTTTATTTCC
Downstream 100 bases:
>100_bases AAAAGAGAGCAATGTATGTTTGAATATATGGAGAATGTTTCGCCAAATGAGGCAGAAAATATTAGAAAAACTATTCAGGA TCTGTTGAGGCAGACCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MYMAKNVGICYYMSMTLKDRIPKEFYSLFRTKNMDAYMQIVVALYEENNEVYASLGLTREECQIIIADTISKTGIVWQTD YNEDESDKDSGSMDNHDDYNPDSEIDVIYDQATFAYTLTPSAILGRLINWGWIRSDFDEKLNTYVIAFPQYSQMYAELFK KLLVDDDSRERESILAVYSALFTYFSDPEKNNDILKNALYTSKNLGQLLSNMQDGMRAYFDELSRMKDFIGIQKVLIKEI NNSDSRRYAILTTTDSFYRYKEAVKELISKILNQNDDRRAELEGILSQTTPGTFERKRYEYSVEYCDKASELVYKVEHEF DLIERKYNKLIEQKTIFAKRALARIHYILQEGADDEDNIVKLINLIDKSDKTDEILGALRNRMKFTRQFYNVTDDSFPGR RERGRSEFVPFVIDDASAGEDDMADFVPKPLYTKKELQSFRDKNMRDGMFVTDEQTVESMEDLEKLLFLWQEETNERMGE DTVSLDGEITKSDGVSYSRLVISKSDSKREA
Sequences:
>Translated_511_residues MYMAKNVGICYYMSMTLKDRIPKEFYSLFRTKNMDAYMQIVVALYEENNEVYASLGLTREECQIIIADTISKTGIVWQTD YNEDESDKDSGSMDNHDDYNPDSEIDVIYDQATFAYTLTPSAILGRLINWGWIRSDFDEKLNTYVIAFPQYSQMYAELFK KLLVDDDSRERESILAVYSALFTYFSDPEKNNDILKNALYTSKNLGQLLSNMQDGMRAYFDELSRMKDFIGIQKVLIKEI NNSDSRRYAILTTTDSFYRYKEAVKELISKILNQNDDRRAELEGILSQTTPGTFERKRYEYSVEYCDKASELVYKVEHEF DLIERKYNKLIEQKTIFAKRALARIHYILQEGADDEDNIVKLINLIDKSDKTDEILGALRNRMKFTRQFYNVTDDSFPGR RERGRSEFVPFVIDDASAGEDDMADFVPKPLYTKKELQSFRDKNMRDGMFVTDEQTVESMEDLEKLLFLWQEETNERMGE DTVSLDGEITKSDGVSYSRLVISKSDSKREA >Mature_511_residues MYMAKNVGICYYMSMTLKDRIPKEFYSLFRTKNMDAYMQIVVALYEENNEVYASLGLTREECQIIIADTISKTGIVWQTD YNEDESDKDSGSMDNHDDYNPDSEIDVIYDQATFAYTLTPSAILGRLINWGWIRSDFDEKLNTYVIAFPQYSQMYAELFK KLLVDDDSRERESILAVYSALFTYFSDPEKNNDILKNALYTSKNLGQLLSNMQDGMRAYFDELSRMKDFIGIQKVLIKEI NNSDSRRYAILTTTDSFYRYKEAVKELISKILNQNDDRRAELEGILSQTTPGTFERKRYEYSVEYCDKASELVYKVEHEF DLIERKYNKLIEQKTIFAKRALARIHYILQEGADDEDNIVKLINLIDKSDKTDEILGALRNRMKFTRQFYNVTDDSFPGR RERGRSEFVPFVIDDASAGEDDMADFVPKPLYTKKELQSFRDKNMRDGMFVTDEQTVESMEDLEKLLFLWQEETNERMGE DTVSLDGEITKSDGVSYSRLVISKSDSKREA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59665; Mature: 59665
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMAKNVGICYYMSMTLKDRIPKEFYSLFRTKNMDAYMQIVVALYEENNEVYASLGLTRE CCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHH ECQIIIADTISKTGIVWQTDYNEDESDKDSGSMDNHDDYNPDSEIDVIYDQATFAYTLTP HCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECH SAILGRLINWGWIRSDFDEKLNTYVIAFPQYSQMYAELFKKLLVDDDSRERESILAVYSA HHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LFTYFSDPEKNNDILKNALYTSKNLGQLLSNMQDGMRAYFDELSRMKDFIGIQKVLIKEI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNSDSRRYAILTTTDSFYRYKEAVKELISKILNQNDDRRAELEGILSQTTPGTFERKRYE CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHH YSVEYCDKASELVYKVEHEFDLIERKYNKLIEQKTIFAKRALARIHYILQEGADDEDNIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KLINLIDKSDKTDEILGALRNRMKFTRQFYNVTDDSFPGRRERGRSEFVPFVIDDASAGE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHCCCCEEEECCCCCC DDMADFVPKPLYTKKELQSFRDKNMRDGMFVTDEQTVESMEDLEKLLFLWQEETNERMGE CHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC DTVSLDGEITKSDGVSYSRLVISKSDSKREA CCCCCCCEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MYMAKNVGICYYMSMTLKDRIPKEFYSLFRTKNMDAYMQIVVALYEENNEVYASLGLTRE CCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHH ECQIIIADTISKTGIVWQTDYNEDESDKDSGSMDNHDDYNPDSEIDVIYDQATFAYTLTP HCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECH SAILGRLINWGWIRSDFDEKLNTYVIAFPQYSQMYAELFKKLLVDDDSRERESILAVYSA HHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LFTYFSDPEKNNDILKNALYTSKNLGQLLSNMQDGMRAYFDELSRMKDFIGIQKVLIKEI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NNSDSRRYAILTTTDSFYRYKEAVKELISKILNQNDDRRAELEGILSQTTPGTFERKRYE CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHH YSVEYCDKASELVYKVEHEFDLIERKYNKLIEQKTIFAKRALARIHYILQEGADDEDNIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KLINLIDKSDKTDEILGALRNRMKFTRQFYNVTDDSFPGRRERGRSEFVPFVIDDASAGE HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHCCCCEEEECCCCCC DDMADFVPKPLYTKKELQSFRDKNMRDGMFVTDEQTVESMEDLEKLLFLWQEETNERMGE CHHHHHCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC DTVSLDGEITKSDGVSYSRLVISKSDSKREA CCCCCCCEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA