| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238922817
Identifier: 238922817
GI number: 238922817
Start: 369515
End: 370240
Strand: Direct
Name: 238922817
Synonym: EUBREC_0405
Alternate gene names: NA
Gene position: 369515-370240 (Clockwise)
Preceding gene: 238922816
Following gene: 238922818
Centisome position: 10.71
GC content: 41.87
Gene sequence:
>726_bases ATGTTTGAATATATGGAGAATGTTTCGCCAAATGAGGCAGAAAATATTAGAAAAACTATTCAGGATCTGTTGAGGCAGAC CTGTATTTTGCAAATGAAGTGTGACCCCGTTACATTGATTCAAAGAGACAATCCAAGGTATCAGGTGTGTCTTAGAAACA GAGAGTTTATCTCTGATTATCTGGCTGTGCTTGACTGTGAGCTGGTTCATGACCAGCAGGAGCATCTTTTCAGGATAACG GGTGATGGTGTCATGCTCGAGAAGATGACTCTTCTGACTGCAAGGATTGTCATTATAATGAAGATTATATACAGGGATAA AATCATGGGCGAGGGGCTTAATGCGACAACAACGAATCTGGCGGAGATTCGTGAGTATGGCAGAAATACCAATCTGATTA CCAGAAAGCTCACTAATCAGGAATGGTCAGACGCTCTTTTGCTTATGAAAACACATCAGATGATTGAACTGCCGGGGGCT ATTGCAAACCTGGAGGACAACACACCAATCTATATTTATGGCACAGTAAATATATTCTGCTCAGCCATGGATATAAATGA GCTTGTGCGCATGTACAGTGATGAGGTGGAGCTGATTAAGTATGATAACGAGTCGGCTGCAACACTTGAAGCTGCCGGAT TGAATACAGAAGGCAGTTCTGTAAACCATACCCATGAATTTGCCAAGAACAGTGAAATGGAGGAGTTACCAATTGAGTCA GTCTAA
Upstream 100 bases:
>100_bases TCTGGATGGAGAGATAACAAAGAGTGATGGTGTAAGCTACTCAAGGCTTGTAATATCCAAATCGGACTCTAAACGAGAAG CATAGAAAAGAGAGCAATGT
Downstream 100 bases:
>100_bases GAAGATATTTACCAGAATGTGTCTAAACAACTGGGGCGGAATAAATCACAAGGTTTTGCAATTTAATGAGTATGTCAATT TGTTCAGTGGTAAGAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MFEYMENVSPNEAENIRKTIQDLLRQTCILQMKCDPVTLIQRDNPRYQVCLRNREFISDYLAVLDCELVHDQQEHLFRIT GDGVMLEKMTLLTARIVIIMKIIYRDKIMGEGLNATTTNLAEIREYGRNTNLITRKLTNQEWSDALLLMKTHQMIELPGA IANLEDNTPIYIYGTVNIFCSAMDINELVRMYSDEVELIKYDNESAATLEAAGLNTEGSSVNHTHEFAKNSEMEELPIES V
Sequences:
>Translated_241_residues MFEYMENVSPNEAENIRKTIQDLLRQTCILQMKCDPVTLIQRDNPRYQVCLRNREFISDYLAVLDCELVHDQQEHLFRIT GDGVMLEKMTLLTARIVIIMKIIYRDKIMGEGLNATTTNLAEIREYGRNTNLITRKLTNQEWSDALLLMKTHQMIELPGA IANLEDNTPIYIYGTVNIFCSAMDINELVRMYSDEVELIKYDNESAATLEAAGLNTEGSSVNHTHEFAKNSEMEELPIES V >Mature_241_residues MFEYMENVSPNEAENIRKTIQDLLRQTCILQMKCDPVTLIQRDNPRYQVCLRNREFISDYLAVLDCELVHDQQEHLFRIT GDGVMLEKMTLLTARIVIIMKIIYRDKIMGEGLNATTTNLAEIREYGRNTNLITRKLTNQEWSDALLLMKTHQMIELPGA IANLEDNTPIYIYGTVNIFCSAMDINELVRMYSDEVELIKYDNESAATLEAAGLNTEGSSVNHTHEFAKNSEMEELPIES V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27703; Mature: 27703
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEYMENVSPNEAENIRKTIQDLLRQTCILQMKCDPVTLIQRDNPRYQVCLRNREFISDY CCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCEEEEECCHHHHHHH LAVLDCELVHDQQEHLFRITGDGVMLEKMTLLTARIVIIMKIIYRDKIMGEGLNATTTNL HHHHHHHHHCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AEIREYGRNTNLITRKLTNQEWSDALLLMKTHQMIELPGAIANLEDNTPIYIYGTVNIFC HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEHEEEE SAMDINELVRMYSDEVELIKYDNESAATLEAAGLNTEGSSVNHTHEFAKNSEMEELPIES ECCCHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHCCCCCC V C >Mature Secondary Structure MFEYMENVSPNEAENIRKTIQDLLRQTCILQMKCDPVTLIQRDNPRYQVCLRNREFISDY CCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCEEEEECCHHHHHHH LAVLDCELVHDQQEHLFRITGDGVMLEKMTLLTARIVIIMKIIYRDKIMGEGLNATTTNL HHHHHHHHHCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH AEIREYGRNTNLITRKLTNQEWSDALLLMKTHQMIELPGAIANLEDNTPIYIYGTVNIFC HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEHEEEE SAMDINELVRMYSDEVELIKYDNESAATLEAAGLNTEGSSVNHTHEFAKNSEMEELPIES ECCCHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCHHCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA