| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922677
Identifier: 238922677
GI number: 238922677
Start: 235312
End: 236931
Strand: Direct
Name: 238922677
Synonym: EUBREC_0252
Alternate gene names: NA
Gene position: 235312-236931 (Clockwise)
Preceding gene: 238922676
Following gene: 238922679
Centisome position: 6.82
GC content: 40.43
Gene sequence:
>1620_bases ATGAATTATTATGAGCTTTCAAACACTGTCACCCCTGATACCATTGGATACAAAAATGGCTTATGGCAGAAAAGATATGT GCAGATTTACAGAGTATTGACTGTTGTATGGAGTGTTTTGACATTATGCTTGTTGTTTGGAATGTTCCATAGGGATGACT ATAGTTCAGGAATGATTAAATCATGTTTATTGCTCTTTTTTGCATGTATTATTTTTCTGGTGTTGATGCTGATCGCTGTT GTTAATATATCAGCGAAAAGGACAGAGAATTGGAGCCTTCAGGACAGGCATGATTACAATTTGGCTATGTACAGAACCAG ATACAGGAATAATAGGCAGCTTCAGTCAGTTGTGTTGATAGTGATGGCTAAGCAGCAGCTTCTTATGTCAAACTATGATC TGGCCGCACAGGCTCTTGCAATGGTTGATATCAATTGTGTGAAGCTGCCATATTTAAGAGATTATTATTTTTGCAATGCT GCAGTTTTGTTCCTATGTGATAAGCCGGGCTGGCAGGAGTGGCTGGATAAGTGCTATGCTGTGCCGGCGAATCAAAAGCA GATGACGGACATGCAGATTGGTGCATTGTTTTTATCAGAAAATGCAAAAATGGATTTGTGTCAGGCAATTTACGCAGACA CCAGGATAAAGCATAAGTGGCCGACAGCAATTGTAATTACTGCGATATTGGTGTTGTATGCAGGAATTTTCTATGGAGTA GGAGGCTTACTGTCTCGAGGATATCACTATAGATACTGGTTCGAGCTGTCGTCTGTTCTGATAACATACGCAGGCTGTAT GGTCTTGTCGCTTTACTGGATAATCAGGTGGATATTATTCAGTGACAGCGTATCTAAAAAGTCAGAAGGGGTAAGGCTAT TCAGAAAAGTAATACTCATAGTCATGTGGCTGTGTTTGATGGCTGCCATGGTTATTAATCTGATAATTTCATTCATCGGC ATGGATACGGAGAAAAAGGTATATGCGAATGGTCTTATCTGCATGAGTACTTCGGATGGATATAGTACTGATGAATATTA TAACATCAAGGTTGGACCTTTCCTGAGACGAAATTTGACATTTAAGGAAACAATAAAGTTTGGACTTATAAACGATGATG ACAGCACCGATGACAGTGGAAATGATGCTGGTGATAGTGGTGCAAATGACAGTGAAAACAGCACTGAGAATAATTCACAG TCATACAATGACGCTTCTGAAAATACAGAAAATGAGAATGCAGGAAATGAGAACGCTGACGAAAGCCTGGATACAGAAAG CATGGCCGTATATGATTACATGTCAGCTGCAGGGATACTCTCAGCCGGGGATGCCGGTATTATTCGCAACGGTTCCACAG CTAAAGGTACTTTTTATTCTGTTTTCGAAACCGGCGAGGCTGATGGAAATACGTATGAGAATAGGTTAGTTTATGACAGA GTTTCCGAAAATGGACAGTGTGATTTGTTTGTTTATGAGCAGTTGGTTAGTGGCTCAGATACAAGGCTACTGGGATTTTA TGCTGTAAATAAAACCACAAATGAGGTTTTCTCAGCGGATAGAAACTCATGGGGTGGTGTGAGCAGCAGGGAATATCAGG ACGCAACAGGAGAAAATTAG
Upstream 100 bases:
>100_bases AGATACAGATAAAATAGATTTCACACAAATTGGTTTATTCGTGGTACAATTAAGCCACGGATAAATCAATTTCATTTACA GAGATAAAGAGGCGGATTGC
Downstream 100 bases:
>100_bases GCTGGTACATGTCACATAAACGATGTACTAGCTGGTTGTCTCCCTGCGGATCAGCACAGGCGCTATCTTTTTGTGCGTTG GCGCCAAATCGGGTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MNYYELSNTVTPDTIGYKNGLWQKRYVQIYRVLTVVWSVLTLCLLFGMFHRDDYSSGMIKSCLLLFFACIIFLVLMLIAV VNISAKRTENWSLQDRHDYNLAMYRTRYRNNRQLQSVVLIVMAKQQLLMSNYDLAAQALAMVDINCVKLPYLRDYYFCNA AVLFLCDKPGWQEWLDKCYAVPANQKQMTDMQIGALFLSENAKMDLCQAIYADTRIKHKWPTAIVITAILVLYAGIFYGV GGLLSRGYHYRYWFELSSVLITYAGCMVLSLYWIIRWILFSDSVSKKSEGVRLFRKVILIVMWLCLMAAMVINLIISFIG MDTEKKVYANGLICMSTSDGYSTDEYYNIKVGPFLRRNLTFKETIKFGLINDDDSTDDSGNDAGDSGANDSENSTENNSQ SYNDASENTENENAGNENADESLDTESMAVYDYMSAAGILSAGDAGIIRNGSTAKGTFYSVFETGEADGNTYENRLVYDR VSENGQCDLFVYEQLVSGSDTRLLGFYAVNKTTNEVFSADRNSWGGVSSREYQDATGEN
Sequences:
>Translated_539_residues MNYYELSNTVTPDTIGYKNGLWQKRYVQIYRVLTVVWSVLTLCLLFGMFHRDDYSSGMIKSCLLLFFACIIFLVLMLIAV VNISAKRTENWSLQDRHDYNLAMYRTRYRNNRQLQSVVLIVMAKQQLLMSNYDLAAQALAMVDINCVKLPYLRDYYFCNA AVLFLCDKPGWQEWLDKCYAVPANQKQMTDMQIGALFLSENAKMDLCQAIYADTRIKHKWPTAIVITAILVLYAGIFYGV GGLLSRGYHYRYWFELSSVLITYAGCMVLSLYWIIRWILFSDSVSKKSEGVRLFRKVILIVMWLCLMAAMVINLIISFIG MDTEKKVYANGLICMSTSDGYSTDEYYNIKVGPFLRRNLTFKETIKFGLINDDDSTDDSGNDAGDSGANDSENSTENNSQ SYNDASENTENENAGNENADESLDTESMAVYDYMSAAGILSAGDAGIIRNGSTAKGTFYSVFETGEADGNTYENRLVYDR VSENGQCDLFVYEQLVSGSDTRLLGFYAVNKTTNEVFSADRNSWGGVSSREYQDATGEN >Mature_539_residues MNYYELSNTVTPDTIGYKNGLWQKRYVQIYRVLTVVWSVLTLCLLFGMFHRDDYSSGMIKSCLLLFFACIIFLVLMLIAV VNISAKRTENWSLQDRHDYNLAMYRTRYRNNRQLQSVVLIVMAKQQLLMSNYDLAAQALAMVDINCVKLPYLRDYYFCNA AVLFLCDKPGWQEWLDKCYAVPANQKQMTDMQIGALFLSENAKMDLCQAIYADTRIKHKWPTAIVITAILVLYAGIFYGV GGLLSRGYHYRYWFELSSVLITYAGCMVLSLYWIIRWILFSDSVSKKSEGVRLFRKVILIVMWLCLMAAMVINLIISFIG MDTEKKVYANGLICMSTSDGYSTDEYYNIKVGPFLRRNLTFKETIKFGLINDDDSTDDSGNDAGDSGANDSENSTENNSQ SYNDASENTENENAGNENADESLDTESMAVYDYMSAAGILSAGDAGIIRNGSTAKGTFYSVFETGEADGNTYENRLVYDR VSENGQCDLFVYEQLVSGSDTRLLGFYAVNKTTNEVFSADRNSWGGVSSREYQDATGEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61028; Mature: 61028
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYYELSNTVTPDTIGYKNGLWQKRYVQIYRVLTVVWSVLTLCLLFGMFHRDDYSSGMIK CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SCLLLFFACIIFLVLMLIAVVNISAKRTENWSLQDRHDYNLAMYRTRYRNNRQLQSVVLI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH VMAKQQLLMSNYDLAAQALAMVDINCVKLPYLRDYYFCNAAVLFLCDKPGWQEWLDKCYA HHHHHHHHHCCCHHHHHHHHHHCCCEEECCHHHHHHHHCEEEEEEECCCCHHHHHHHHHC VPANQKQMTDMQIGALFLSENAKMDLCQAIYADTRIKHKWPTAIVITAILVLYAGIFYGV CCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH GGLLSRGYHYRYWFELSSVLITYAGCMVLSLYWIIRWILFSDSVSKKSEGVRLFRKVILI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VMWLCLMAAMVINLIISFIGMDTEKKVYANGLICMSTSDGYSTDEYYNIKVGPFLRRNLT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCCEEEEEECCHHHHCCC FKETIKFGLINDDDSTDDSGNDAGDSGANDSENSTENNSQSYNDASENTENENAGNENAD HHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESLDTESMAVYDYMSAAGILSAGDAGIIRNGSTAKGTFYSVFETGEADGNTYENRLVYDR CCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHCCEEEEC VSENGQCDLFVYEQLVSGSDTRLLGFYAVNKTTNEVFSADRNSWGGVSSREYQDATGEN CCCCCCEEEEEHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNYYELSNTVTPDTIGYKNGLWQKRYVQIYRVLTVVWSVLTLCLLFGMFHRDDYSSGMIK CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH SCLLLFFACIIFLVLMLIAVVNISAKRTENWSLQDRHDYNLAMYRTRYRNNRQLQSVVLI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH VMAKQQLLMSNYDLAAQALAMVDINCVKLPYLRDYYFCNAAVLFLCDKPGWQEWLDKCYA HHHHHHHHHCCCHHHHHHHHHHCCCEEECCHHHHHHHHCEEEEEEECCCCHHHHHHHHHC VPANQKQMTDMQIGALFLSENAKMDLCQAIYADTRIKHKWPTAIVITAILVLYAGIFYGV CCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH GGLLSRGYHYRYWFELSSVLITYAGCMVLSLYWIIRWILFSDSVSKKSEGVRLFRKVILI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VMWLCLMAAMVINLIISFIGMDTEKKVYANGLICMSTSDGYSTDEYYNIKVGPFLRRNLT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCCCCEEEEEECCHHHHCCC FKETIKFGLINDDDSTDDSGNDAGDSGANDSENSTENNSQSYNDASENTENENAGNENAD HHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESLDTESMAVYDYMSAAGILSAGDAGIIRNGSTAKGTFYSVFETGEADGNTYENRLVYDR CCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHCCEEEEC VSENGQCDLFVYEQLVSGSDTRLLGFYAVNKTTNEVFSADRNSWGGVSSREYQDATGEN CCCCCCEEEEEHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA