Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238922585

Identifier: 238922585

GI number: 238922585

Start: 154985

End: 155740

Strand: Direct

Name: 238922585

Synonym: EUBREC_0159

Alternate gene names: NA

Gene position: 154985-155740 (Clockwise)

Preceding gene: 238922584

Following gene: 238922586

Centisome position: 4.49

GC content: 33.99

Gene sequence:

>756_bases
ATGACAATAAATCAGAAAAAGTCTTTAGTGGCATTTTACATTTCAAAGTTTAATGATGACGCATTTCGTGAATTGGGATA
TGGTGGACCGGTGTCAAAAGCGATGGATGACTTATCAGTACGAATTACCGGTCCGGGTGTTGAACCTAATGCTTATTTAA
GGCGAAGGCGGGATGAATTTGATGTGTTTTTTGATAACGGAAGAGTTGGACAACGCAACAGAAAACCAACAGAGACGGTA
AAAGAACTGTATGGGCAATGGAATGTAATGGAGTTTGAAGAAATAACAGAAATTGTAAAATCAGTTTTGGATGGAACAAT
GGAAGAATCTCAGGTGATTAATTTGGAAGTAGATGAAGAAACTGTTTCAGAATATGATGTTGAAACGTATCTAAATTTTG
ATGACAATACGGCAGCATTAAATAAAACGGTAAAATCTGTGATGGAACGTACTTATTCCAAAAAGAAGGTAGAAATGTTA
AAGCGTTTATATGCGTATAGATGTCAGATATGTGGTCAAAATGTCGGTGAAGAACATGGCGTTAATATTGCAGAAGCTCA
TCATATTAAGTATTTTTCAAAGAGTGTTGATAATTCATCAGATAATCTTCTTATATTGTGTCCAAATCATCATAGTCTGA
TTCATGTATTAAATCCAAAATTTGATTATGATGAATTACAGTATATTTATCCAGACGGAAAGACTGATAAAATTATATTG
GATTTGCATCTGACTCATGGTAAGGAGGAAGAATAA

Upstream 100 bases:

>100_bases
AGCTTATTAAACTAGCAGGTAATAGTATCGTGGTTGATGTTTTGGAAGCTATTTTCAGACAGATAATGGATATTAATGAG
AAGATTTTAGGTGAAAGAAA

Downstream 100 bases:

>100_bases
AAATGACAATATCTGAGCAAATAAAAGTATTGTGTGTCAGACAGAAAATAAGTCTGGCAGAGTTGGCAAGGAGATTGGGA
ACAACACCTCAAAATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEFDVFFDNGRVGQRNRKPTETV
KELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEETVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEML
KRLYAYRCQICGQNVGEEHGVNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL
DLHLTHGKEEE

Sequences:

>Translated_251_residues
MTINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEFDVFFDNGRVGQRNRKPTETV
KELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEETVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEML
KRLYAYRCQICGQNVGEEHGVNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL
DLHLTHGKEEE
>Mature_250_residues
TINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEFDVFFDNGRVGQRNRKPTETVK
ELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEETVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEMLK
RLYAYRCQICGQNVGEEHGVNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIILD
LHLTHGKEEE

Specific function: Unknown

COG id: COG3440

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29019; Mature: 28888

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEF
CCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHCCCCC
DVFFDNGRVGQRNRKPTETVKELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEE
EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECHH
TVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEMLKRLYAYRCQICGQNVGEEHG
HHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
VNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL
CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEE
DLHLTHGKEEE
EEEECCCCCCC
>Mature Secondary Structure 
TINQKKSLVAFYISKFNDDAFRELGYGGPVSKAMDDLSVRITGPGVEPNAYLRRRRDEF
CCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHCCCCC
DVFFDNGRVGQRNRKPTETVKELYGQWNVMEFEEITEIVKSVLDGTMEESQVINLEVDEE
EEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECHH
TVSEYDVETYLNFDDNTAALNKTVKSVMERTYSKKKVEMLKRLYAYRCQICGQNVGEEHG
HHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
VNIAEAHHIKYFSKSVDNSSDNLLILCPNHHSLIHVLNPKFDYDELQYIYPDGKTDKIIL
CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCCCCCCEEEE
DLHLTHGKEEE
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA