| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922472
Identifier: 238922472
GI number: 238922472
Start: 52191
End: 53765
Strand: Direct
Name: 238922472
Synonym: EUBREC_0046
Alternate gene names: NA
Gene position: 52191-53765 (Clockwise)
Preceding gene: 238922471
Following gene: 238922473
Centisome position: 1.51
GC content: 43.68
Gene sequence:
>1575_bases GTGAGAGGCAGTATAACGATATTTGCCACAATGCTTCTCATGCTGGTGTCACAGTTTCTGTTTACTGTACTGGAAGCCGG CAGGAATCTGACACTTACCAATATAGCATGCATGAATTCAGAGGCTGTAGCAGAGTCAGTTTTTGCACAGTATTGCAGAC CATTGTGGGATGAATACCATCTGTTAGCGTATGACGCCGGAAGTGACGCAATGGGCAATGTGGATATCGAAAATGTCAAG TCGTATATGAAGAAGCTTACGACTGACAATTTTAAGATAAGCGATTCAGGAGCTTTTGCCGGGGGTACTATTGTAAACGG CACCAGTATGCTAAGGTTGTCAATGGATGAGCTCGAATCCATGAAATATGTGCTTATGACGGATGATGGTGGTGATGTGT ATACAAATGCGGTTGTCTCATATATGAAGAAAAATATTGGTTATGAAACAGTCAAAAATCTTTACAGTCAGTATAGCTCA TTGAATGAAAACAAGTCTGCGGGTGAGTATGATGACAGTAAAATAGATAGTGCGTTAAAAGCCTTAAAGGATAATGCAGC TCATGAAGGCGGAGGCAAAAGCATAGCGAGGTCGTCACCGCCAAGAGCTTACAGTGCACATTTATCGGTTTCGAAAACAA AGCAGACGTCAGAAAGTAAGGCAGAAAGCACAGAAGGCGGCAATGCAATAGAAAATCCGCTGGTCAAGGTGCAGAAAGTA AAGGCATCAGGCATATTATCGCAGGTGGTTGATGAGAGCACGGTGTCAGGAAACAGTATTGATACATCAGCCAGAGTGTC CGGGCGAAGTCTGCATAAAGGAACAGGGGGCTGGTCCGAAAGTGGTGATGACTGGTATGCGAAAGTACTTATGCAGCAGT ATATTCTGACATATATGAGTTGTTACACTGATACAAATCCCAATCATGCCCTTAACTATGAGGTGGAGTACATCATAGGA GGCAGAGCGAGTGATAAGGATAATCTGAAGATCGTTATAGCAGAAATACTGGCTCTGCGTGCGGCTGCCAATATGGCATA CCTGGCAGGAAGCGCATCAAAGCAGGCACAGGCGATGGCTCTTGCTGCAATTATCGGTGGAATTACTCTGACACCGGAGG TAATTGAAGGGGTGGAAAAGGGAATTCTGGCGGCCTGGGCATTCTGTGAAAGTGTGCTGGATTTAAGGGCACTTTTGGAT GGGGATAAGATTCCACTGATAAAAAGTGATACGTCATGGACATCGAGTCTGTATGGCATGACAAGCATGCTCACAGGGCA GGTGAAGGCAAAAAGCTCAAATGAAGGAATAGGCTACAAATCATATCTGGGTATGCTGCTTTTTACAAAGAGCATGAAAA ATATAGCGTATCGCTCGATGGATGTACAGGAGGCTACAGTGCGTATGACCGGTGCGCATGAAAGCTTTAGAATGGACAAT GCAATCTGTGAGCTTAATGCAGATGTAAGCTACAAATATCATGGCATATTTTTATGCTTTGTGAATCTTTTAGATGGGGC AGATAACGAGTATACCATTAAAAATAAGGCAAAGTATTCCTATTATGGACGATGA
Upstream 100 bases:
>100_bases TAATTGTCGTGTTAATCGGTCTGGTGCTGATTTTTAAGAAGCAGCTTACGACGCTTGTAAACAATATCTTTCAGACAATC TCAAGAGAGGCTGGTAAAGT
Downstream 100 bases:
>100_bases CGAAATAAGAAAGGCAGGTGTATGAAGGTGTCTTTTGTTAATAAAGTAAAGTTCCACATAAAAAAACTTTATAGAAAGGC CAAACTCCCAGGCGATGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MRGSITIFATMLLMLVSQFLFTVLEAGRNLTLTNIACMNSEAVAESVFAQYCRPLWDEYHLLAYDAGSDAMGNVDIENVK SYMKKLTTDNFKISDSGAFAGGTIVNGTSMLRLSMDELESMKYVLMTDDGGDVYTNAVVSYMKKNIGYETVKNLYSQYSS LNENKSAGEYDDSKIDSALKALKDNAAHEGGGKSIARSSPPRAYSAHLSVSKTKQTSESKAESTEGGNAIENPLVKVQKV KASGILSQVVDESTVSGNSIDTSARVSGRSLHKGTGGWSESGDDWYAKVLMQQYILTYMSCYTDTNPNHALNYEVEYIIG GRASDKDNLKIVIAEILALRAAANMAYLAGSASKQAQAMALAAIIGGITLTPEVIEGVEKGILAAWAFCESVLDLRALLD GDKIPLIKSDTSWTSSLYGMTSMLTGQVKAKSSNEGIGYKSYLGMLLFTKSMKNIAYRSMDVQEATVRMTGAHESFRMDN AICELNADVSYKYHGIFLCFVNLLDGADNEYTIKNKAKYSYYGR
Sequences:
>Translated_524_residues MRGSITIFATMLLMLVSQFLFTVLEAGRNLTLTNIACMNSEAVAESVFAQYCRPLWDEYHLLAYDAGSDAMGNVDIENVK SYMKKLTTDNFKISDSGAFAGGTIVNGTSMLRLSMDELESMKYVLMTDDGGDVYTNAVVSYMKKNIGYETVKNLYSQYSS LNENKSAGEYDDSKIDSALKALKDNAAHEGGGKSIARSSPPRAYSAHLSVSKTKQTSESKAESTEGGNAIENPLVKVQKV KASGILSQVVDESTVSGNSIDTSARVSGRSLHKGTGGWSESGDDWYAKVLMQQYILTYMSCYTDTNPNHALNYEVEYIIG GRASDKDNLKIVIAEILALRAAANMAYLAGSASKQAQAMALAAIIGGITLTPEVIEGVEKGILAAWAFCESVLDLRALLD GDKIPLIKSDTSWTSSLYGMTSMLTGQVKAKSSNEGIGYKSYLGMLLFTKSMKNIAYRSMDVQEATVRMTGAHESFRMDN AICELNADVSYKYHGIFLCFVNLLDGADNEYTIKNKAKYSYYGR >Mature_524_residues MRGSITIFATMLLMLVSQFLFTVLEAGRNLTLTNIACMNSEAVAESVFAQYCRPLWDEYHLLAYDAGSDAMGNVDIENVK SYMKKLTTDNFKISDSGAFAGGTIVNGTSMLRLSMDELESMKYVLMTDDGGDVYTNAVVSYMKKNIGYETVKNLYSQYSS LNENKSAGEYDDSKIDSALKALKDNAAHEGGGKSIARSSPPRAYSAHLSVSKTKQTSESKAESTEGGNAIENPLVKVQKV KASGILSQVVDESTVSGNSIDTSARVSGRSLHKGTGGWSESGDDWYAKVLMQQYILTYMSCYTDTNPNHALNYEVEYIIG GRASDKDNLKIVIAEILALRAAANMAYLAGSASKQAQAMALAAIIGGITLTPEVIEGVEKGILAAWAFCESVLDLRALLD GDKIPLIKSDTSWTSSLYGMTSMLTGQVKAKSSNEGIGYKSYLGMLLFTKSMKNIAYRSMDVQEATVRMTGAHESFRMDN AICELNADVSYKYHGIFLCFVNLLDGADNEYTIKNKAKYSYYGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57077; Mature: 57077
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSITIFATMLLMLVSQFLFTVLEAGRNLTLTNIACMNSEAVAESVFAQYCRPLWDEYH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCE LLAYDAGSDAMGNVDIENVKSYMKKLTTDNFKISDSGAFAGGTIVNGTSMLRLSMDELES EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEEHHHHCC MKYVLMTDDGGDVYTNAVVSYMKKNIGYETVKNLYSQYSSLNENKSAGEYDDSKIDSALK CEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ALKDNAAHEGGGKSIARSSPPRAYSAHLSVSKTKQTSESKAESTEGGNAIENPLVKVQKV HHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH KASGILSQVVDESTVSGNSIDTSARVSGRSLHKGTGGWSESGDDWYAKVLMQQYILTYMS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CYTDTNPNHALNYEVEYIIGGRASDKDNLKIVIAEILALRAAANMAYLAGSASKQAQAMA HHCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHH LAAIIGGITLTPEVIEGVEKGILAAWAFCESVLDLRALLDGDKIPLIKSDTSWTSSLYGM HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH TSMLTGQVKAKSSNEGIGYKSYLGMLLFTKSMKNIAYRSMDVQEATVRMTGAHESFRMDN HHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCHHHHHCC AICELNADVSYKYHGIFLCFVNLLDGADNEYTIKNKAKYSYYGR CEEEECCCCCEEHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MRGSITIFATMLLMLVSQFLFTVLEAGRNLTLTNIACMNSEAVAESVFAQYCRPLWDEYH CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCE LLAYDAGSDAMGNVDIENVKSYMKKLTTDNFKISDSGAFAGGTIVNGTSMLRLSMDELES EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEEHHHHCC MKYVLMTDDGGDVYTNAVVSYMKKNIGYETVKNLYSQYSSLNENKSAGEYDDSKIDSALK CEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ALKDNAAHEGGGKSIARSSPPRAYSAHLSVSKTKQTSESKAESTEGGNAIENPLVKVQKV HHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCHHHCCHHHHHHH KASGILSQVVDESTVSGNSIDTSARVSGRSLHKGTGGWSESGDDWYAKVLMQQYILTYMS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CYTDTNPNHALNYEVEYIIGGRASDKDNLKIVIAEILALRAAANMAYLAGSASKQAQAMA HHCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHH LAAIIGGITLTPEVIEGVEKGILAAWAFCESVLDLRALLDGDKIPLIKSDTSWTSSLYGM HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH TSMLTGQVKAKSSNEGIGYKSYLGMLLFTKSMKNIAYRSMDVQEATVRMTGAHESFRMDN HHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEECCCHHHHHCC AICELNADVSYKYHGIFLCFVNLLDGADNEYTIKNKAKYSYYGR CEEEECCCCCEEHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA