| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238922473
Identifier: 238922473
GI number: 238922473
Start: 53787
End: 54635
Strand: Direct
Name: 238922473
Synonym: EUBREC_0047
Alternate gene names: NA
Gene position: 53787-54635 (Clockwise)
Preceding gene: 238922472
Following gene: 238922474
Centisome position: 1.56
GC content: 42.76
Gene sequence:
>849_bases ATGAAGGTGTCTTTTGTTAATAAAGTAAAGTTCCACATAAAAAAACTTTATAGAAAGGCCAAACTCCCAGGCGATGATAG TTCTCAAAAGATGCCCTCATGCACCTGCCTGAAAGCGTCATATACACTTGAGGCTGCGGTAATATTTCCGCTTGTAGCAG GCTTTTTTGTATTTATACTTTTTTTCTTCAGGGTGGTTCAGGTGGAGTCGCAGGTGAAGGCTGCTCTGTATTATTCATCC AGGATGAGTGCATTAGCCAGCAGTGCAAATGATTCGTCCGTTGTCTCAGTGGCGACAGCAGAGGTACTCTTTAGGAGTAG AATATCTGACTCAAAGCACATTGATACATACGTGAGCGGTGGAAGGTATGGAGTGTCACTGCTTGGCTCAAGTATGGATG GTGATGATGTCTCGCTTAAAGCAAAGTATAAGGTTAAGCTTCCGGTGAGCTTTTTTACGGTAGATGGAATATGGATAGAG GATTATAGCAACAGCAGAAAATGGACAGGCAAAAATCCCGGTGAAAAGACAGACCCATATGTATTTTACACTGACTATGG CAGTGTTTATCACCTGTCCGAGCAGTGCAACTACCTGGATCTGAGCATAAAGAGCATCAAATGGTCACATGTGGGGGCAA GCAGAAACAAAGATGGTAGGAAATACCACGCATGTTACTGTGCCGCGGATAAAAAAATAGAAGGTTCAACGGTATTTATA ACAGATTATGGCACGAACTATCACGGAAAGCTTGGATGCAGTAAGCTTAAGCGGACAGTACACAAGGTGCACAAATCGGA GGTAAATGGCAAAAATCTGTGCAGTAAATGTAAAGGAGAAGGAACATGA
Upstream 100 bases:
>100_bases CTTTGTGAATCTTTTAGATGGGGCAGATAACGAGTATACCATTAAAAATAAGGCAAAGTATTCCTATTATGGACGATGAC GAAATAAGAAAGGCAGGTGT
Downstream 100 bases:
>100_bases TACAGCTTATCATTTTACTTGGAATAATCAGTATAATTGACTTTTCAACCAAAAAGATACCGGTAGTTGTATTGGTAGTA ATGGGGATTGTAGGTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKVSFVNKVKFHIKKLYRKAKLPGDDSSQKMPSCTCLKASYTLEAAVIFPLVAGFFVFILFFFRVVQVESQVKAALYYSS RMSALASSANDSSVVSVATAEVLFRSRISDSKHIDTYVSGGRYGVSLLGSSMDGDDVSLKAKYKVKLPVSFFTVDGIWIE DYSNSRKWTGKNPGEKTDPYVFYTDYGSVYHLSEQCNYLDLSIKSIKWSHVGASRNKDGRKYHACYCAADKKIEGSTVFI TDYGTNYHGKLGCSKLKRTVHKVHKSEVNGKNLCSKCKGEGT
Sequences:
>Translated_282_residues MKVSFVNKVKFHIKKLYRKAKLPGDDSSQKMPSCTCLKASYTLEAAVIFPLVAGFFVFILFFFRVVQVESQVKAALYYSS RMSALASSANDSSVVSVATAEVLFRSRISDSKHIDTYVSGGRYGVSLLGSSMDGDDVSLKAKYKVKLPVSFFTVDGIWIE DYSNSRKWTGKNPGEKTDPYVFYTDYGSVYHLSEQCNYLDLSIKSIKWSHVGASRNKDGRKYHACYCAADKKIEGSTVFI TDYGTNYHGKLGCSKLKRTVHKVHKSEVNGKNLCSKCKGEGT >Mature_282_residues MKVSFVNKVKFHIKKLYRKAKLPGDDSSQKMPSCTCLKASYTLEAAVIFPLVAGFFVFILFFFRVVQVESQVKAALYYSS RMSALASSANDSSVVSVATAEVLFRSRISDSKHIDTYVSGGRYGVSLLGSSMDGDDVSLKAKYKVKLPVSFFTVDGIWIE DYSNSRKWTGKNPGEKTDPYVFYTDYGSVYHLSEQCNYLDLSIKSIKWSHVGASRNKDGRKYHACYCAADKKIEGSTVFI TDYGTNYHGKLGCSKLKRTVHKVHKSEVNGKNLCSKCKGEGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31430; Mature: 31430
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSFVNKVKFHIKKLYRKAKLPGDDSSQKMPSCTCLKASYTLEAAVIFPLVAGFFVFIL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH FFFRVVQVESQVKAALYYSSRMSALASSANDSSVVSVATAEVLFRSRISDSKHIDTYVSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHCC GRYGVSLLGSSMDGDDVSLKAKYKVKLPVSFFTVDGIWIEDYSNSRKWTGKNPGEKTDPY CCEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCE VFYTDYGSVYHLSEQCNYLDLSIKSIKWSHVGASRNKDGRKYHACYCAADKKIEGSTVFI EEEECCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCEECCCEEEE TDYGTNYHGKLGCSKLKRTVHKVHKSEVNGKNLCSKCKGEGT EECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure MKVSFVNKVKFHIKKLYRKAKLPGDDSSQKMPSCTCLKASYTLEAAVIFPLVAGFFVFIL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH FFFRVVQVESQVKAALYYSSRMSALASSANDSSVVSVATAEVLFRSRISDSKHIDTYVSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHCC GRYGVSLLGSSMDGDDVSLKAKYKVKLPVSFFTVDGIWIEDYSNSRKWTGKNPGEKTDPY CCEEEEEECCCCCCCCEEEEEEEEEEEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCE VFYTDYGSVYHLSEQCNYLDLSIKSIKWSHVGASRNKDGRKYHACYCAADKKIEGSTVFI EEEECCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCEECCCEEEE TDYGTNYHGKLGCSKLKRTVHKVHKSEVNGKNLCSKCKGEGT EECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA