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The map label for this gene is licC [H]

Identifier: 238922248

GI number: 238922248

Start: 445241

End: 445960

Strand: Reverse

Name: licC [H]

Synonym: EUBELI_20483

Alternate gene names: 238922248

Gene position: 445960-445241 (Counterclockwise)

Preceding gene: 238922249

Following gene: 238922247

Centisome position: 71.16

GC content: 39.03

Gene sequence:

>720_bases
ATGCCAAAAGTAGAAAGAGCTATTATTATGGCAGCTGGTTTAGGAAATCGAATGCACCCAGTGACACTGTCAACACCGAA
ACCTATGGTTAAAGTGAATGGGGTGCGAATGATCGACACAGTCATTGATGGTCTGCATGAAAATGAAATTTATGAAATTT
ATGTTGTTGTCGGTTATCTTAAAGAACAGTTTGTGACACTTGAAAAGGAGTATTTTGGTGTCAGGTTGATTGAAAATCCA
TACTATGATACTTGCAACAATATATCTTCCCTTTATGTAGCACGAGAGCATATTGAAAATGCGATTATTCTGGATGGTGA
TCAGATTATTTATAATCCTGAAATTCTTGCACCAGAATTTGAACGCTCTGGTTATAACAGTGTTTGGACAGATGGTGAAA
CGGATGAGTGGCTTCAGAATGTTGAGAATGGCATTGTTACGGCATGCAGTCGGACAGGTGGAAAAGGCGGATGGCAGCTG
TACAGTATTTCTCGCTGGACTGCAGAGGATGGGAAAAAACTAAAACGTCATCTTGAAATTGAGTTTGAACAAAAGAAGAA
TCAACAAATCTACTGGGATGATGTGGCGATGTTCTGCTACCCAAAGGAGTATCAATTGGGTATCCGTCCTATGAATAGAG
ACGATATTACAGAGGTGGATAATTTGAGTGAGCTAATTGCTTTAGATGCCAGCTATAAAAAATATGTGGAGGAAAAGTAA

Upstream 100 bases:

>100_bases
TGTGGAGTTTGGTGAGTATTCGCTTCGACAGTACCGATATGCAAAGGATTACTATCGAATCGTTCAAGAAGAATTGAAAA
AGCAAGGGGAGGAAGAGTAA

Downstream 100 bases:

>100_bases
ATGAATACTAAAAAAGAACATGGAAAAATAGACTGGATGATAACACTGGTGCCCTTGGCAATCGTAATTGCATTATGTGT
TCTATTCTTTTTGGCACCAG

Product: choline kinase / choline-phosphate cytidylyltransferase

Products: ADP; O-phosphocholine

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPKVERAIIMAAGLGNRMHPVTLSTPKPMVKVNGVRMIDTVIDGLHENEIYEIYVVVGYLKEQFVTLEKEYFGVRLIENP
YYDTCNNISSLYVAREHIENAIILDGDQIIYNPEILAPEFERSGYNSVWTDGETDEWLQNVENGIVTACSRTGGKGGWQL
YSISRWTAEDGKKLKRHLEIEFEQKKNQQIYWDDVAMFCYPKEYQLGIRPMNRDDITEVDNLSELIALDASYKKYVEEK

Sequences:

>Translated_239_residues
MPKVERAIIMAAGLGNRMHPVTLSTPKPMVKVNGVRMIDTVIDGLHENEIYEIYVVVGYLKEQFVTLEKEYFGVRLIENP
YYDTCNNISSLYVAREHIENAIILDGDQIIYNPEILAPEFERSGYNSVWTDGETDEWLQNVENGIVTACSRTGGKGGWQL
YSISRWTAEDGKKLKRHLEIEFEQKKNQQIYWDDVAMFCYPKEYQLGIRPMNRDDITEVDNLSELIALDASYKKYVEEK
>Mature_238_residues
PKVERAIIMAAGLGNRMHPVTLSTPKPMVKVNGVRMIDTVIDGLHENEIYEIYVVVGYLKEQFVTLEKEYFGVRLIENPY
YDTCNNISSLYVAREHIENAIILDGDQIIYNPEILAPEFERSGYNSVWTDGETDEWLQNVENGIVTACSRTGGKGGWQLY
SISRWTAEDGKKLKRHLEIEFEQKKNQQIYWDDVAMFCYPKEYQLGIRPMNRDDITEVDNLSELIALDASYKKYVEEK

Specific function: Unknown

COG id: COG4750

COG function: function code M; CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017189
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: 2.7.1.32; 2.7.7.15

Molecular weight: Translated: 27648; Mature: 27516

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVERAIIMAAGLGNRMHPVTLSTPKPMVKVNGVRMIDTVIDGLHENEIYEIYVVVGYL
CCCHHEEEEEEECCCCCCCEEEECCCCCEEEECCEEEEHHHHCCCCCCCEEEEEEEEEHH
KEQFVTLEKEYFGVRLIENPYYDTCNNISSLYVAREHIENAIILDGDQIIYNPEILAPEF
HHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCEEEECCCEECCCH
ERSGYNSVWTDGETDEWLQNVENGIVTACSRTGGKGGWQLYSISRWTAEDGKKLKRHLEI
HCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHCCE
EFEQKKNQQIYWDDVAMFCYPKEYQLGIRPMNRDDITEVDNLSELIALDASYKKYVEEK
EEECCCCCEEEEECEEEEEECCHHEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
PKVERAIIMAAGLGNRMHPVTLSTPKPMVKVNGVRMIDTVIDGLHENEIYEIYVVVGYL
CCHHEEEEEEECCCCCCCEEEECCCCCEEEECCEEEEHHHHCCCCCCCEEEEEEEEEHH
KEQFVTLEKEYFGVRLIENPYYDTCNNISSLYVAREHIENAIILDGDQIIYNPEILAPEF
HHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCEEEECCCEECCCH
ERSGYNSVWTDGETDEWLQNVENGIVTACSRTGGKGGWQLYSISRWTAEDGKKLKRHLEI
HCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHCCE
EFEQKKNQQIYWDDVAMFCYPKEYQLGIRPMNRDDITEVDNLSELIALDASYKKYVEEK
EEECCCCCEEEEECEEEEEECCHHEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; choline

Specific reaction: ATP + choline = ADP + O-phosphocholine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]