Click here to switch to the map view.

The map label for this gene is yeaV [H]

Identifier: 238922247

GI number: 238922247

Start: 443675

End: 445240

Strand: Reverse

Name: yeaV [H]

Synonym: EUBELI_20482

Alternate gene names: 238922247

Gene position: 445240-443675 (Counterclockwise)

Preceding gene: 238922248

Following gene: 238922246

Centisome position: 71.04

GC content: 41.25

Gene sequence:

>1566_bases
ATGAATACTAAAAAAGAACATGGAAAAATAGACTGGATGATAACACTGGTGCCCTTGGCAATCGTAATTGCATTATGTGT
TCTATTCTTTTTGGCACCAGAACAATCGAATGCAGTACTGAGCCAGATTCGTTTTTTTTTAGGTGATACTTTTGGAACAT
ATTACTTAGTAATTGGATTGGGAATTTTCATTCTTTCTCTGTATATTGCTGGTTCTAAGTACGGTAACATAGTTTTTGGC
GAGCAAAATGAGAAGCCGAAGTATTCTTTTTTTGTGTGGGGTTCAATGATGTTCACCTGTGGTCTTGCAGCAGATATTCT
GTTCTATTCGTTTTCGGAATGGGTGTTGTATGCAACTGATCCGCATCTGACAGAGATGGGAAGTATTCAGGATTGGGCAG
GCGTATATCCACTGTTCCATTGGAGCTTCATTCCGTGGGGATTCTATCTGGTACTGGCTGTTGCCTTTGGCTTTATGCTC
CATGTAAGAAAAAGAAACCGTCAGAAGTATTCAGAGGCATGCCGCCCGATTCTTGGAAAGCATACTGATGGCTGGGTAGG
TCGCATTATTGACCTGTTAGCTGTATTTGCACTCCTTGCTGGTACTGCTACCACATTTAGCGTGGCAACACCGCTTATGG
CAACTATTATTGGCGAACTGTTCCATGTTGCCGTTAGTCGTACTGTAATTAACATTATTATTCTTCTGATTACCTGCGCT
GTATATACATATTCCTTACTGCATGGATTTAGGGGGATCAGCAAGTTGGCAAACATTTGTATTTATATGTTCTTTGGTCT
GATTGCCTTTGTGCTGCTGTTTGGTGGAGAAACACGGTACATTATTGAAACTGGTTTTTCTTCACTTGGTCGAATGATAC
AGAACTTTGTTGATCTGTCTACATTTACTGACCCGCTCCGTACATCGAACTTTCCGCAGAATTGGACGATTTACTATTGG
GCTTATTGGATGGTTTGGTGTGTGGCTGCTCCGTTCTTTATCGGAAGCATTTCTCGTGGTAGAACAGTGCGTCAGACAAT
TCTTGGTGGCTATATATTTGGTGTTGGTTCCACATTGACGAGCTTTATTGTACTGGGTAACTACTCTATGGGAATGCAGG
TGACCGGAAAAGCTGATTTTATTGCACAGTATCTGGAGAGCGGTGACCTGTACGGGATGATTGTATCTATCATTAAGACG
ATGCCTGGTGCGCCTGTTATTATGGTAGTTGTTTTGTTGACAATGATTGCTTTTTATGCGACGTCTTTTGACTCAATTGC
ATTGACAGCATCCTGCTACAGCTATCACACATTGAGAGATGGTGAGCAACCGAATAAGGGCATTCAGTTTATGTGGTGTA
TTTTGCTGATTTTGCTTCCAATTGCTTTGCTGTTTGCAGAAAGTTCTATGAACAATCTTCAGTCGGTGAGTATTGTGGCG
GCATTCCCGATTGGAGCGGTAATTGTGATGATTGCGGTTAGCTTTATGAAGGATGCAAAAAAATATATGGAAAATGTGGA
AGAAAAAGGTCAGCAAGAGGTTGACAATGTTGACAACGAAAAATAA

Upstream 100 bases:

>100_bases
TATCCGTCCTATGAATAGAGACGATATTACAGAGGTGGATAATTTGAGTGAGCTAATTGCTTTAGATGCCAGCTATAAAA
AATATGTGGAGGAAAAGTAA

Downstream 100 bases:

>100_bases
ATTTGACAGGAGAGTATGTTAAATTTTAAAAGTACAATATAAAAATGTGTTGATAATAATGAGAATTTTTGCAGTTGGAT
ATAAAGGGGCAGGTTTTATA

Product: betaine/carnitine transporter, BCCT family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MNTKKEHGKIDWMITLVPLAIVIALCVLFFLAPEQSNAVLSQIRFFLGDTFGTYYLVIGLGIFILSLYIAGSKYGNIVFG
EQNEKPKYSFFVWGSMMFTCGLAADILFYSFSEWVLYATDPHLTEMGSIQDWAGVYPLFHWSFIPWGFYLVLAVAFGFML
HVRKRNRQKYSEACRPILGKHTDGWVGRIIDLLAVFALLAGTATTFSVATPLMATIIGELFHVAVSRTVINIIILLITCA
VYTYSLLHGFRGISKLANICIYMFFGLIAFVLLFGGETRYIIETGFSSLGRMIQNFVDLSTFTDPLRTSNFPQNWTIYYW
AYWMVWCVAAPFFIGSISRGRTVRQTILGGYIFGVGSTLTSFIVLGNYSMGMQVTGKADFIAQYLESGDLYGMIVSIIKT
MPGAPVIMVVVLLTMIAFYATSFDSIALTASCYSYHTLRDGEQPNKGIQFMWCILLILLPIALLFAESSMNNLQSVSIVA
AFPIGAVIVMIAVSFMKDAKKYMENVEEKGQQEVDNVDNEK

Sequences:

>Translated_521_residues
MNTKKEHGKIDWMITLVPLAIVIALCVLFFLAPEQSNAVLSQIRFFLGDTFGTYYLVIGLGIFILSLYIAGSKYGNIVFG
EQNEKPKYSFFVWGSMMFTCGLAADILFYSFSEWVLYATDPHLTEMGSIQDWAGVYPLFHWSFIPWGFYLVLAVAFGFML
HVRKRNRQKYSEACRPILGKHTDGWVGRIIDLLAVFALLAGTATTFSVATPLMATIIGELFHVAVSRTVINIIILLITCA
VYTYSLLHGFRGISKLANICIYMFFGLIAFVLLFGGETRYIIETGFSSLGRMIQNFVDLSTFTDPLRTSNFPQNWTIYYW
AYWMVWCVAAPFFIGSISRGRTVRQTILGGYIFGVGSTLTSFIVLGNYSMGMQVTGKADFIAQYLESGDLYGMIVSIIKT
MPGAPVIMVVVLLTMIAFYATSFDSIALTASCYSYHTLRDGEQPNKGIQFMWCILLILLPIALLFAESSMNNLQSVSIVA
AFPIGAVIVMIAVSFMKDAKKYMENVEEKGQQEVDNVDNEK
>Mature_521_residues
MNTKKEHGKIDWMITLVPLAIVIALCVLFFLAPEQSNAVLSQIRFFLGDTFGTYYLVIGLGIFILSLYIAGSKYGNIVFG
EQNEKPKYSFFVWGSMMFTCGLAADILFYSFSEWVLYATDPHLTEMGSIQDWAGVYPLFHWSFIPWGFYLVLAVAFGFML
HVRKRNRQKYSEACRPILGKHTDGWVGRIIDLLAVFALLAGTATTFSVATPLMATIIGELFHVAVSRTVINIIILLITCA
VYTYSLLHGFRGISKLANICIYMFFGLIAFVLLFGGETRYIIETGFSSLGRMIQNFVDLSTFTDPLRTSNFPQNWTIYYW
AYWMVWCVAAPFFIGSISRGRTVRQTILGGYIFGVGSTLTSFIVLGNYSMGMQVTGKADFIAQYLESGDLYGMIVSIIKT
MPGAPVIMVVVLLTMIAFYATSFDSIALTASCYSYHTLRDGEQPNKGIQFMWCILLILLPIALLFAESSMNNLQSVSIVA
AFPIGAVIVMIAVSFMKDAKKYMENVEEKGQQEVDNVDNEK

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=446, Percent_Identity=26.9058295964126, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1786224, Length=523, Percent_Identity=28.1070745697897, Blast_Score=176, Evalue=4e-45,
Organism=Escherichia coli, GI1786506, Length=530, Percent_Identity=26.0377358490566, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 58313; Mature: 58313

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKKEHGKIDWMITLVPLAIVIALCVLFFLAPEQSNAVLSQIRFFLGDTFGTYYLVIGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
GIFILSLYIAGSKYGNIVFGEQNEKPKYSFFVWGSMMFTCGLAADILFYSFSEWVLYATD
HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
PHLTEMGSIQDWAGVYPLFHWSFIPWGFYLVLAVAFGFMLHVRKRNRQKYSEACRPILGK
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTDGWVGRIIDLLAVFALLAGTATTFSVATPLMATIIGELFHVAVSRTVINIIILLITCA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYTYSLLHGFRGISKLANICIYMFFGLIAFVLLFGGETRYIIETGFSSLGRMIQNFVDLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
TFTDPLRTSNFPQNWTIYYWAYWMVWCVAAPFFIGSISRGRTVRQTILGGYIFGVGSTLT
HHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SFIVLGNYSMGMQVTGKADFIAQYLESGDLYGMIVSIIKTMPGAPVIMVVVLLTMIAFYA
HHHHHCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TSFDSIALTASCYSYHTLRDGEQPNKGIQFMWCILLILLPIALLFAESSMNNLQSVSIVA
CCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AFPIGAVIVMIAVSFMKDAKKYMENVEEKGQQEVDNVDNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTKKEHGKIDWMITLVPLAIVIALCVLFFLAPEQSNAVLSQIRFFLGDTFGTYYLVIGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
GIFILSLYIAGSKYGNIVFGEQNEKPKYSFFVWGSMMFTCGLAADILFYSFSEWVLYATD
HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECC
PHLTEMGSIQDWAGVYPLFHWSFIPWGFYLVLAVAFGFMLHVRKRNRQKYSEACRPILGK
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTDGWVGRIIDLLAVFALLAGTATTFSVATPLMATIIGELFHVAVSRTVINIIILLITCA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYTYSLLHGFRGISKLANICIYMFFGLIAFVLLFGGETRYIIETGFSSLGRMIQNFVDLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHH
TFTDPLRTSNFPQNWTIYYWAYWMVWCVAAPFFIGSISRGRTVRQTILGGYIFGVGSTLT
HHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SFIVLGNYSMGMQVTGKADFIAQYLESGDLYGMIVSIIKTMPGAPVIMVVVLLTMIAFYA
HHHHHCCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
TSFDSIALTASCYSYHTLRDGEQPNKGIQFMWCILLILLPIALLFAESSMNNLQSVSIVA
CCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AFPIGAVIVMIAVSFMKDAKKYMENVEEKGQQEVDNVDNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]