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The map label for this gene is ycgA [H]

Identifier: 238922233

GI number: 238922233

Start: 430653

End: 432098

Strand: Reverse

Name: ycgA [H]

Synonym: EUBELI_20468

Alternate gene names: 238922233

Gene position: 432098-430653 (Counterclockwise)

Preceding gene: 238922235

Following gene: 238922232

Centisome position: 68.94

GC content: 38.45

Gene sequence:

>1446_bases
ATGATTTATATTAAAATGTATAAAAATATAAATTTGTTATGGGAGAAAAAGTTCATGGAAACAAAAGCAAAGAAAAAATG
GAAAACGCCACATACATTTGTAATACTTGTGGTAATTATTCTTATTGCTGCAGCGGCAACATATATTGTGCCAGCAGGCG
AGTTTACAAGATTTAAAGATGCAGCAACAGGCAAGACTTTAGTTGAAGCTGGAAGTTATCACAGAATAGCATCAAGTCCG
CTTAATCCGTTAAAGATTCCTTCAGCAATCTATACCGGAATTGTGAAATCAGCGTCAACAATTACATTTATGCTGATAAT
CGGCGGAGCTTTTCAGGTAATTACATCAACAGGCGCACTTACAGCGTTATGCAAGAAGTTATCTAAGACATTTTCTAAGC
ACAAATATGTTGTAATTCCTGTATTTTTGACATTATTTTCTATATTCGGATTCACAATGGGAATGTCATCAGAGGTTATG
ATATTCGTTCCTATCGGAATTACACTTGCGTTATTTTTAGGGCTTGATAAAGTTACAGGAACAGCAATGATTGCACTCGG
TGCAGCGGTTGGATTCACAGCCGGATTACTTAATCCGTTCAATGTAGGAGTTGCGCAGGATATAGCAGAATTACAGTTGT
TCTCCGGGATGGCTTACAGAGTATTTATTCTTGTTGTGCTTCTTGCTGCTACAAGTGCATACATAATCTGCTATGCAAGA
AAGGTTGCAGCACATCCTGAAAAAAGCGTAATATATGGAATTCCTGAAGACCAGGAGTACACATTTGACAATGCAACAGA
CACAATTACGGTAAGACAGATTGCAGTTCTTATTGTTATGGCACTTGGCTTTGGAATACTTATATATGGCCTTTCAAAGA
AGGGCTGGTACTTTGAAGAAATGTCAGGTCTGTTCATATTTATGGGTGTAATATGCGGATTTATCAGCGGTTACGGTCCT
AGCAGAATTGCCAGAGAATTCGGAGAAGGCGCTAAAGGCATTATCGTAGGATGTCTTATAATTGGAATTGCCCGTACAGT
TGAGGTAATCTTAAGTGATGCCAATATTCTTGATACTATCGTGTATGGAATTGTTAATATTGTAAATGTTATGCCAGATT
CAATTAAGGCTGTCGGCATGTTCTTATGCCAGTCACTTATTAACTGCGTAATCGTGTCAGGAACAGGTCAGGCAGCAGTT
ACAATGCCACTTATGGTACCGGTTTCAGACCTTGTAGGAATATCAAGACAGACATCAGTACTTGCATTCCAGTTAGGAGA
CGGATTCTCTAACTCAGTACTTCCAATGTCATCATCACTTATGGGATATCTTGCTGTATCAAAGATTCCATACAGTAAAT
GGCTTAAGTTCATGATGCCTCTGTTCCTTATATGGACAGCACTTGGATGCCTGTTTATGCTGGGCGCATTAATGATTGGA
TATTAG

Upstream 100 bases:

>100_bases
ATAATAATGTAATAATTATACATAATTAAAATGTATCAATCAATCGAAACTATAAATTAGATTTATACTTTCGATAAAAA
CATACAATTTTATTTTTAGT

Downstream 100 bases:

>100_bases
AATTGATTAGGAGCAGATATTATGTCAGACGATATTAAGAAGCAGCTTGGAGCGGTTATCGACAGCTATAAAGAAGATTT
ATGCCAGATGTCAGATGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MIYIKMYKNINLLWEKKFMETKAKKKWKTPHTFVILVVIILIAAAATYIVPAGEFTRFKDAATGKTLVEAGSYHRIASSP
LNPLKIPSAIYTGIVKSASTITFMLIIGGAFQVITSTGALTALCKKLSKTFSKHKYVVIPVFLTLFSIFGFTMGMSSEVM
IFVPIGITLALFLGLDKVTGTAMIALGAAVGFTAGLLNPFNVGVAQDIAELQLFSGMAYRVFILVVLLAATSAYIICYAR
KVAAHPEKSVIYGIPEDQEYTFDNATDTITVRQIAVLIVMALGFGILIYGLSKKGWYFEEMSGLFIFMGVICGFISGYGP
SRIAREFGEGAKGIIVGCLIIGIARTVEVILSDANILDTIVYGIVNIVNVMPDSIKAVGMFLCQSLINCVIVSGTGQAAV
TMPLMVPVSDLVGISRQTSVLAFQLGDGFSNSVLPMSSSLMGYLAVSKIPYSKWLKFMMPLFLIWTALGCLFMLGALMIG
Y

Sequences:

>Translated_481_residues
MIYIKMYKNINLLWEKKFMETKAKKKWKTPHTFVILVVIILIAAAATYIVPAGEFTRFKDAATGKTLVEAGSYHRIASSP
LNPLKIPSAIYTGIVKSASTITFMLIIGGAFQVITSTGALTALCKKLSKTFSKHKYVVIPVFLTLFSIFGFTMGMSSEVM
IFVPIGITLALFLGLDKVTGTAMIALGAAVGFTAGLLNPFNVGVAQDIAELQLFSGMAYRVFILVVLLAATSAYIICYAR
KVAAHPEKSVIYGIPEDQEYTFDNATDTITVRQIAVLIVMALGFGILIYGLSKKGWYFEEMSGLFIFMGVICGFISGYGP
SRIAREFGEGAKGIIVGCLIIGIARTVEVILSDANILDTIVYGIVNIVNVMPDSIKAVGMFLCQSLINCVIVSGTGQAAV
TMPLMVPVSDLVGISRQTSVLAFQLGDGFSNSVLPMSSSLMGYLAVSKIPYSKWLKFMMPLFLIWTALGCLFMLGALMIG
Y
>Mature_481_residues
MIYIKMYKNINLLWEKKFMETKAKKKWKTPHTFVILVVIILIAAAATYIVPAGEFTRFKDAATGKTLVEAGSYHRIASSP
LNPLKIPSAIYTGIVKSASTITFMLIIGGAFQVITSTGALTALCKKLSKTFSKHKYVVIPVFLTLFSIFGFTMGMSSEVM
IFVPIGITLALFLGLDKVTGTAMIALGAAVGFTAGLLNPFNVGVAQDIAELQLFSGMAYRVFILVVLLAATSAYIICYAR
KVAAHPEKSVIYGIPEDQEYTFDNATDTITVRQIAVLIVMALGFGILIYGLSKKGWYFEEMSGLFIFMGVICGFISGYGP
SRIAREFGEGAKGIIVGCLIIGIARTVEVILSDANILDTIVYGIVNIVNVMPDSIKAVGMFLCQSLINCVIVSGTGQAAV
TMPLMVPVSDLVGISRQTSVLAFQLGDGFSNSVLPMSSSLMGYLAVSKIPYSKWLKFMMPLFLIWTALGCLFMLGALMIG
Y

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=503, Percent_Identity=30.6163021868787, Blast_Score=220, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 51994; Mature: 51994

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYIKMYKNINLLWEKKFMETKAKKKWKTPHTFVILVVIILIAAAATYIVPAGEFTRFKD
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHH
AATGKTLVEAGSYHRIASSPLNPLKIPSAIYTGIVKSASTITFMLIIGGAFQVITSTGAL
CCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHCHHHHEEHHHHCCHHHHHHCCCHH
TALCKKLSKTFSKHKYVVIPVFLTLFSIFGFTMGMSSEVMIFVPIGITLALFLGLDKVTG
HHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
TAMIALGAAVGFTAGLLNPFNVGVAQDIAELQLFSGMAYRVFILVVLLAATSAYIICYAR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KVAAHPEKSVIYGIPEDQEYTFDNATDTITVRQIAVLIVMALGFGILIYGLSKKGWYFEE
HHHCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHH
MSGLFIFMGVICGFISGYGPSRIAREFGEGAKGIIVGCLIIGIARTVEVILSDANILDTI
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VYGIVNIVNVMPDSIKAVGMFLCQSLINCVIVSGTGQAAVTMPLMVPVSDLVGISRQTSV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEHHCHHHHHCCCCCCEE
LAFQLGDGFSNSVLPMSSSLMGYLAVSKIPYSKWLKFMMPLFLIWTALGCLFMLGALMIG
EEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Y
C
>Mature Secondary Structure
MIYIKMYKNINLLWEKKFMETKAKKKWKTPHTFVILVVIILIAAAATYIVPAGEFTRFKD
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHH
AATGKTLVEAGSYHRIASSPLNPLKIPSAIYTGIVKSASTITFMLIIGGAFQVITSTGAL
CCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHCHHHHEEHHHHCCHHHHHHCCCHH
TALCKKLSKTFSKHKYVVIPVFLTLFSIFGFTMGMSSEVMIFVPIGITLALFLGLDKVTG
HHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
TAMIALGAAVGFTAGLLNPFNVGVAQDIAELQLFSGMAYRVFILVVLLAATSAYIICYAR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KVAAHPEKSVIYGIPEDQEYTFDNATDTITVRQIAVLIVMALGFGILIYGLSKKGWYFEE
HHHCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHH
MSGLFIFMGVICGFISGYGPSRIAREFGEGAKGIIVGCLIIGIARTVEVILSDANILDTI
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VYGIVNIVNVMPDSIKAVGMFLCQSLINCVIVSGTGQAAVTMPLMVPVSDLVGISRQTSV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEHHCHHHHHCCCCCCEE
LAFQLGDGFSNSVLPMSSSLMGYLAVSKIPYSKWLKFMMPLFLIWTALGCLFMLGALMIG
EEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]