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The map label for this gene is idi [C]

Identifier: 238922217

GI number: 238922217

Start: 417297

End: 417872

Strand: Reverse

Name: idi [C]

Synonym: EUBELI_20452

Alternate gene names: 238922217

Gene position: 417872-417297 (Counterclockwise)

Preceding gene: 238922218

Following gene: 238922216

Centisome position: 66.67

GC content: 41.49

Gene sequence:

>576_bases
ATGGAGTACGGATTTAACATGGAATTACTTGATATCGTTGATGAGAATGGAAAGCCGACAGGTGAGACTGTTGAGCGAAA
GACTGCACATAGTGAGGGAATCAGGCATAGAACGGCGCATGTGTGGATTGTAAGAAAGTCTGATGAGGGAGCAGAGGTAC
TGTTGCAGAAAAGGGCTATGAATAAGGACTCATTTCCTGGAAGATATGATACTTCTTCGGCGGGACATATTCAGGCTGGT
GACGAACCGGAGGAATCTGCTATAAGAGAACTGCATGAGGAACTTGGGATTAAGGCTTCTGTTGATGATTTGCAGTTTGT
TGATACATTTGTAATCCAATATGAAAAAGAATTTTATGGCAAGATGTTTAAGGACAGTGAGATTGCATTTGTCTATGTAT
ACACAAAGCCAGTCAATATAGATGAACTTACATTGCAGAAGGAAGAATTGGACGGCGTTGAGTGGTTTAATCTTGAATAT
GTCTATGAAGAGTGCAGAAAGCATAATCAGAAATTCTGTGCACCGGTTGGCGGCTTGGAGATTGTAAGAAGGTTTGTCAG
AGGTACCGGATTATGA

Upstream 100 bases:

>100_bases
TCCTGGGAGGGGTGCTGCGAAAGCGGTACTATCGGAGTCTAGGTTCAATCACTTTATTTTTCCCGTAGAACTCGCGATAG
CTGGTGGCTTTTTTATTATT

Downstream 100 bases:

>100_bases
TTTCAAGAAATATGTACAAGACAGGTGCTGTGTTAATGGCACTGGTGACAGCATTTACAGTGACAGGATTGTCAGGCTGT
AAGAGCAGAACGGTGTCTAA

Product: hypothetical protein

Products: Dimethylallyl diphosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MEYGFNMELLDIVDENGKPTGETVERKTAHSEGIRHRTAHVWIVRKSDEGAEVLLQKRAMNKDSFPGRYDTSSAGHIQAG
DEPEESAIRELHEELGIKASVDDLQFVDTFVIQYEKEFYGKMFKDSEIAFVYVYTKPVNIDELTLQKEELDGVEWFNLEY
VYEECRKHNQKFCAPVGGLEIVRRFVRGTGL

Sequences:

>Translated_191_residues
MEYGFNMELLDIVDENGKPTGETVERKTAHSEGIRHRTAHVWIVRKSDEGAEVLLQKRAMNKDSFPGRYDTSSAGHIQAG
DEPEESAIRELHEELGIKASVDDLQFVDTFVIQYEKEFYGKMFKDSEIAFVYVYTKPVNIDELTLQKEELDGVEWFNLEY
VYEECRKHNQKFCAPVGGLEIVRRFVRGTGL
>Mature_191_residues
MEYGFNMELLDIVDENGKPTGETVERKTAHSEGIRHRTAHVWIVRKSDEGAEVLLQKRAMNKDSFPGRYDTSSAGHIQAG
DEPEESAIRELHEELGIKASVDDLQFVDTFVIQYEKEFYGKMFKDSEIAFVYVYTKPVNIDELTLQKEELDGVEWFNLEY
VYEECRKHNQKFCAPVGGLEIVRRFVRGTGL

Specific function: Catalyzes The 1,3-Allylic Rearrangement Of The Homoallylic Substrate Isopentenyl (Ipp) To Its Highly Electrophilic Allylic Isomer, Dimethylallyl Diphosphate (Dmapp). [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 5.3.3.2 [C]

Molecular weight: Translated: 22016; Mature: 22016

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYGFNMELLDIVDENGKPTGETVERKTAHSEGIRHRTAHVWIVRKSDEGAEVLLQKRAM
CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHC
NKDSFPGRYDTSSAGHIQAGDEPEESAIRELHEELGIKASVDDLQFVDTFVIQYEKEFYG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KMFKDSEIAFVYVYTKPVNIDELTLQKEELDGVEWFNLEYVYEECRKHNQKFCAPVGGLE
HHCCCCCEEEEEEEECCCCCHHHEEEHHHCCCCEEEHHHHHHHHHHHCCCHHCCCCCHHH
IVRRFVRGTGL
HHHHHHHHCCC
>Mature Secondary Structure
MEYGFNMELLDIVDENGKPTGETVERKTAHSEGIRHRTAHVWIVRKSDEGAEVLLQKRAM
CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHHHHHHC
NKDSFPGRYDTSSAGHIQAGDEPEESAIRELHEELGIKASVDDLQFVDTFVIQYEKEFYG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KMFKDSEIAFVYVYTKPVNIDELTLQKEELDGVEWFNLEYVYEECRKHNQKFCAPVGGLE
HHCCCCCEEEEEEEECCCCCHHHEEEHHHCCCCEEEHHHHHHHHHHHCCCHHCCCCCHHH
IVRRFVRGTGL
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.036 {isopentenyl} [C]

Substrates: Isopentenyl diphosphate [C]

Specific reaction: Isopentenyl diphosphate --> Dimethylallyl diphosphate [C]

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: Iodoacetamide; PCMB [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]