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The map label for this gene is xynZ [H]

Identifier: 238922216

GI number: 238922216

Start: 416389

End: 417300

Strand: Reverse

Name: xynZ [H]

Synonym: EUBELI_20451

Alternate gene names: 238922216

Gene position: 417300-416389 (Counterclockwise)

Preceding gene: 238922217

Following gene: 238922215

Centisome position: 66.58

GC content: 39.14

Gene sequence:

>912_bases
ATGATTTCAAGAAATATGTACAAGACAGGTGCTGTGTTAATGGCACTGGTGACAGCATTTACAGTGACAGGATTGTCAGG
CTGTAAGAGCAGAACGGTGTCTAATGAAGTGACGACAGAGTATGACATACCAGATGATTATAATGATGAAAGACCGGGTG
TAACATATGGAAATGTTGATGAGATAAGCTATTATTCACCGACAACCGGAAGTGAACGTAAGGCTTATGTATATCTTCCA
AGAGATTATGATGAATCACAGAGTTATCCGGTTGTGTATCTTTTGCATGGAATGAGCGGAAGTTATTCTGAATATAACAG
AATTGGCGCTCTGTATGTTGCACAGAATGCAGTTGATGATTACAACAGGAATCCTGTGATTATGGTGAGTTTTACTGTAT
TCACAGATGCTGATGGTGGTCAGGAGTCAGACTATGATTTCTCTGAACTTACAGCAAAATATGATGCGTGTGAGTATGAT
GTTATTAATGCATTGATTCCATATATTAACGAGCATTATTCTACCAGAATGGGAAGAGAGAATACTGCAATAGCAGGATA
TTCACTTGGCGGAAGAGAATCGCTTTTCCTGTGTTTTGCACATCCTGATGTGTTTGGATATGTAGGTGCATTTGCCCCGG
TAGGAGGAGTGGTTGATACAGGAAATGGAGAAAGAGTTTATGGAAACAGAGGATTTCTTCTGCCTGAATTTGTTAAGGAT
GGAGAGAAGCAGCCTTTGGTTACTCTTATTGTAACGGGCGACAGTGATCCTTACTGCAAGGAATCTGCTATTAACTATTC
GGATTATATGACAAGTCATGGAATTAACCACATTTTCTATATAAGACCGGGAGCGCATGAGGTCAGTGTATGGAATAATG
GATTATATAATTTTATCAGAAGAATATTCTGA

Upstream 100 bases:

>100_bases
TTGAATATGTCTATGAAGAGTGCAGAAAGCATAATCAGAAATTCTGTGCACCGGTTGGCGGCTTGGAGATTGTAAGAAGG
TTTGTCAGAGGTACCGGATT

Downstream 100 bases:

>100_bases
TGCTTGAAGTTATGATTCATATATGAGATAATGTCCCGGGTTAGTCGGGTGAGACATGCTGGCTGCCACACATAAAGACA
GATTATGGAGGATTGTTTTA

Product: enterochelin esterase-like enzyme

Products: NA

Alternate protein names: Xylanase Z; 1,4-beta-D-xylan xylanohydrolase Z [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MISRNMYKTGAVLMALVTAFTVTGLSGCKSRTVSNEVTTEYDIPDDYNDERPGVTYGNVDEISYYSPTTGSERKAYVYLP
RDYDESQSYPVVYLLHGMSGSYSEYNRIGALYVAQNAVDDYNRNPVIMVSFTVFTDADGGQESDYDFSELTAKYDACEYD
VINALIPYINEHYSTRMGRENTAIAGYSLGGRESLFLCFAHPDVFGYVGAFAPVGGVVDTGNGERVYGNRGFLLPEFVKD
GEKQPLVTLIVTGDSDPYCKESAINYSDYMTSHGINHIFYIRPGAHEVSVWNNGLYNFIRRIF

Sequences:

>Translated_303_residues
MISRNMYKTGAVLMALVTAFTVTGLSGCKSRTVSNEVTTEYDIPDDYNDERPGVTYGNVDEISYYSPTTGSERKAYVYLP
RDYDESQSYPVVYLLHGMSGSYSEYNRIGALYVAQNAVDDYNRNPVIMVSFTVFTDADGGQESDYDFSELTAKYDACEYD
VINALIPYINEHYSTRMGRENTAIAGYSLGGRESLFLCFAHPDVFGYVGAFAPVGGVVDTGNGERVYGNRGFLLPEFVKD
GEKQPLVTLIVTGDSDPYCKESAINYSDYMTSHGINHIFYIRPGAHEVSVWNNGLYNFIRRIF
>Mature_303_residues
MISRNMYKTGAVLMALVTAFTVTGLSGCKSRTVSNEVTTEYDIPDDYNDERPGVTYGNVDEISYYSPTTGSERKAYVYLP
RDYDESQSYPVVYLLHGMSGSYSEYNRIGALYVAQNAVDDYNRNPVIMVSFTVFTDADGGQESDYDFSELTAKYDACEYD
VINALIPYINEHYSTRMGRENTAIAGYSLGGRESLFLCFAHPDVFGYVGAFAPVGGVVDTGNGERVYGNRGFLLPEFVKD
GEKQPLVTLIVTGDSDPYCKESAINYSDYMTSHGINHIFYIRPGAHEVSVWNNGLYNFIRRIF

Specific function: Unknown

COG id: COG2382

COG function: function code P; Enterochelin esterase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM6 (carbohydrate binding type-6) domain [H]

Homologues:

Organism=Escherichia coli, GI145693201, Length=273, Percent_Identity=26.3736263736264, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005084
- InterPro:   IPR016134
- InterPro:   IPR002105
- InterPro:   IPR006584
- InterPro:   IPR018242
- InterPro:   IPR018247
- InterPro:   IPR000801
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF03422 CBM_6; PF00404 Dockerin_1; PF00756 Esterase; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 33862; Mature: 33862

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRNMYKTGAVLMALVTAFTVTGLSGCKSRTVSNEVTTEYDIPDDYNDERPGVTYGNVD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCC
EISYYSPTTGSERKAYVYLPRDYDESQSYPVVYLLHGMSGSYSEYNRIGALYVAQNAVDD
CEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHCCEEEEEECCCHHH
YNRNPVIMVSFTVFTDADGGQESDYDFSELTAKYDACEYDVINALIPYINEHYSTRMGRE
CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
NTAIAGYSLGGRESLFLCFAHPDVFGYVGAFAPVGGVVDTGNGERVYGNRGFLLPEFVKD
CCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCEEECCCCCCCHHHHCC
GEKQPLVTLIVTGDSDPYCKESAINYSDYMTSHGINHIFYIRPGAHEVSVWNNGLYNFIR
CCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHH
RIF
HHC
>Mature Secondary Structure
MISRNMYKTGAVLMALVTAFTVTGLSGCKSRTVSNEVTTEYDIPDDYNDERPGVTYGNVD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCC
EISYYSPTTGSERKAYVYLPRDYDESQSYPVVYLLHGMSGSYSEYNRIGALYVAQNAVDD
CEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHCCEEEEEECCCHHH
YNRNPVIMVSFTVFTDADGGQESDYDFSELTAKYDACEYDVINALIPYINEHYSTRMGRE
CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
NTAIAGYSLGGRESLFLCFAHPDVFGYVGAFAPVGGVVDTGNGERVYGNRGFLLPEFVKD
CCEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCEEECCCCCEEECCCCCCCHHHHCC
GEKQPLVTLIVTGDSDPYCKESAINYSDYMTSHGINHIFYIRPGAHEVSVWNNGLYNFIR
CCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHH
RIF
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3139632; 7664125 [H]