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The map label for this gene is sdaAB [H]

Identifier: 238922103

GI number: 238922103

Start: 286861

End: 287520

Strand: Reverse

Name: sdaAB [H]

Synonym: EUBELI_20338

Alternate gene names: 238922103

Gene position: 287520-286861 (Counterclockwise)

Preceding gene: 238922104

Following gene: 238922102

Centisome position: 45.88

GC content: 43.03

Gene sequence:

>660_bases
ATGGATATATTTGACATAATAGGACCTGTGATGGTTGGTCCGTCAAGCTCACATACAGCAGGTGCTGTCAGAATTGGTTA
CATTGCAGGAAAACTTATGGGAGAGCCGATTGCAAAAGCAGAAATTCTTCTATATGGATCGTTTCTGGCAACAGGAAAAG
GACATGGAACAAGGAAGGCACTTGTTGCCGGACTTCTTGGAATGAAACCGGATGATATGAGAATTCCGGACAGTTTTGAG
ATTGCTAAGGAGCATGGTATAGAGGTTGTTTTCGGAGAATCAGCATTAAGAGATGCACATCCGAATACAGCCCAGATTTT
CCTGACATCTGTAACTGGTAAGAATCTTGAAGTTGTTGGTGAATCACTTGGAGGATCACGAATTAATATTGCTCAGATTG
ACGGTATATCTACGAATTTTTCAGGTGATTATCCGACACTTGTTGTGCATAACATGGATCAGCCTGGACATGTGGCAGAA
GTTACATCAATGCTTGCACACAAATCAGTTAATATTGCTGCCATGCAGTTGTACAGGGCTGGCAGAGGCGGCAATTCAGT
TATGGTGCTTGAGTGTGACCAGGAAGTGCCAGAGGAGGGAATTAACTGGTTAAGACATGCAGAAGGTGTTGTCAAGGTGA
CTTATCTTGGCTTGGAATAA

Upstream 100 bases:

>100_bases
ACTGCCGGAATAGTATTCTAAAGACAATGATAGCAAAGGTGCCATCGCTTCTGTATAGGGAGCGGTGGCTTTTTTAAAAT
CTTGGAAAGAGGGATAATTT

Downstream 100 bases:

>100_bases
TCATAATGTAGAATTTGATTAGCATAATTATTGGTGAAAAATGGAGGATTTATGGCAGAATATCATTCAATCAGTGACCT
TGTGAAATTAAGTATTAATA

Product: L-serine dehydratase

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDIFDIIGPVMVGPSSSHTAGAVRIGYIAGKLMGEPIAKAEILLYGSFLATGKGHGTRKALVAGLLGMKPDDMRIPDSFE
IAKEHGIEVVFGESALRDAHPNTAQIFLTSVTGKNLEVVGESLGGSRINIAQIDGISTNFSGDYPTLVVHNMDQPGHVAE
VTSMLAHKSVNIAAMQLYRAGRGGNSVMVLECDQEVPEEGINWLRHAEGVVKVTYLGLE

Sequences:

>Translated_219_residues
MDIFDIIGPVMVGPSSSHTAGAVRIGYIAGKLMGEPIAKAEILLYGSFLATGKGHGTRKALVAGLLGMKPDDMRIPDSFE
IAKEHGIEVVFGESALRDAHPNTAQIFLTSVTGKNLEVVGESLGGSRINIAQIDGISTNFSGDYPTLVVHNMDQPGHVAE
VTSMLAHKSVNIAAMQLYRAGRGGNSVMVLECDQEVPEEGINWLRHAEGVVKVTYLGLE
>Mature_219_residues
MDIFDIIGPVMVGPSSSHTAGAVRIGYIAGKLMGEPIAKAEILLYGSFLATGKGHGTRKALVAGLLGMKPDDMRIPDSFE
IAKEHGIEVVFGESALRDAHPNTAQIFLTSVTGKNLEVVGESLGGSRINIAQIDGISTNFSGDYPTLVVHNMDQPGHVAE
VTSMLAHKSVNIAAMQLYRAGRGGNSVMVLECDQEVPEEGINWLRHAEGVVKVTYLGLE

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF01842 ACT; PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 23267; Mature: 23267

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFDIIGPVMVGPSSSHTAGAVRIGYIAGKLMGEPIAKAEILLYGSFLATGKGHGTRKA
CCHHHHHCCEEECCCCCCCCCEEEEEEEHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHH
LVAGLLGMKPDDMRIPDSFEIAKEHGIEVVFGESALRDAHPNTAQIFLTSVTGKNLEVVG
HHHHHHCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHCCCCCEEEEEEEECCCCCEEEEE
ESLGGSRINIAQIDGISTNFSGDYPTLVVHNMDQPGHVAEVTSMLAHKSVNIAAMQLYRA
CCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEHHHC
GRGGNSVMVLECDQEVPEEGINWLRHAEGVVKVTYLGLE
CCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MDIFDIIGPVMVGPSSSHTAGAVRIGYIAGKLMGEPIAKAEILLYGSFLATGKGHGTRKA
CCHHHHHCCEEECCCCCCCCCEEEEEEEHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHH
LVAGLLGMKPDDMRIPDSFEIAKEHGIEVVFGESALRDAHPNTAQIFLTSVTGKNLEVVG
HHHHHHCCCCCCCCCCCCHHHHHHCCCEEEECCHHHHCCCCCEEEEEEEECCCCCEEEEE
ESLGGSRINIAQIDGISTNFSGDYPTLVVHNMDQPGHVAEVTSMLAHKSVNIAAMQLYRA
CCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHEEHHHC
GRGGNSVMVLECDQEVPEEGINWLRHAEGVVKVTYLGLE
CCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]