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The map label for this gene is yesR [H]

Identifier: 238921991

GI number: 238921991

Start: 185686

End: 186870

Strand: Reverse

Name: yesR [H]

Synonym: EUBELI_20226

Alternate gene names: 238921991

Gene position: 186870-185686 (Counterclockwise)

Preceding gene: 238921992

Following gene: 238921990

Centisome position: 29.82

GC content: 35.86

Gene sequence:

>1185_bases
TTGGATTGTTGGGATAAAAATAAGATAAAAACGGAGGACATATATATGAACAATAAAAAACCTGACAAGAAAGAAATTGA
GAATAAGCTTAATCTTGTAATTGATAAGCTTATGAATCTTGGCAGACCTGATAATGATGAAGAGCTGGAAAAAGGCGGTG
AGTCAATAGGCTTCTTTAAAAGAGACTTTGGAATTAAAGAGTGGGACTGGCCACAGGGGGTCGGTTTATATGGATTGCTT
AAGATAATGCAGATTAATGGCAATGATGAGTATAGAGAATTTCTTTACAAATGGTTTAAAGAAAATATAGCAGAAGGTCT
TCCATCAAAGAATATCAACACAACAACACCGTTACTTACTCTTGTTGAATTAAATAACTATTACAATGATACACAGTTCG
AGGAACTGTGTATCAAATGGGCAGAGTGGCTTATGAACTGCCTTCCAAGAACAAAGGAACGTGGATTCCAGCATGTTACA
AGTGCGAATGGAGACAGACAGGGAGTAAGACTCAATGAGAATGAAATGTGGATAGATACTCTGTTTATGACAGTTTTATT
CCTTAATAAAATGGGTCAGAAGTATAATCGTCAGGATTGGATAAATGAGTCAATACATCAGGTACTTATGCATATAAAGT
ATCTTTGCGACAACAAGACAGGATTGTTTTATCATGGCTGGACATTTAATGAAATGAATAATTTCGGTGGTATATTCTGG
TGCAGAGGGAATAGCTGGTTCACATTAGGAATTCTTGATTATGTTGATATGTTTAAGGGAACACTTAACAGTGGTGTTAA
AGAGATAATAATAGATGCTTATAAAGCCCAGACAGCTGCTCTTAAGAAGCTGCAGAGTAAAAGCGGATTATGGCATACAG
TACTTACAGATTCATCAAGTTATGAAGAAGTATCCGGAAGTGCTGCAATTACAGCCGGTATATTAAAGGGAATCAGAATG
GGAATACTTGATGATTCTTATATAGATGTTGCTGACAAAGCGATAAATGCAATACTTAAAAATATTGATTCAGATGGAAC
AGTGCTTAATGTATCTGGAGGAACTGGTATGGGATATGATGCGGAGCATTATAAGAACATACTTATAGCGCCTATGGCAT
ATGGACAGTCACTTACAATACTGGCTTTAGTGGAGGCATTACAGAATGATAAGAAAAGCATTTAA

Upstream 100 bases:

>100_bases
GAGGTAATTAAGAAACTGGTGCCATTCTTTGTAGCAATTTTGGTCGCACTTCTTTTTGTAACATTTGTACCACAGCTTAG
TATGTGGCTGCCAACAGTAT

Downstream 100 bases:

>100_bases
AATGTATCTTAAAGCTGGATGTGCTGATGAATATGAAAAGCGTCACAATGAATTATGGCCTGAAATGAAGGCAATGATAC
ATGAATATGGCGGACATAAT

Product: Glycoside Hydrolase Family 105-like unsaturated rhamnogalacturonyl hydrolase

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MDCWDKNKIKTEDIYMNNKKPDKKEIENKLNLVIDKLMNLGRPDNDEELEKGGESIGFFKRDFGIKEWDWPQGVGLYGLL
KIMQINGNDEYREFLYKWFKENIAEGLPSKNINTTTPLLTLVELNNYYNDTQFEELCIKWAEWLMNCLPRTKERGFQHVT
SANGDRQGVRLNENEMWIDTLFMTVLFLNKMGQKYNRQDWINESIHQVLMHIKYLCDNKTGLFYHGWTFNEMNNFGGIFW
CRGNSWFTLGILDYVDMFKGTLNSGVKEIIIDAYKAQTAALKKLQSKSGLWHTVLTDSSSYEEVSGSAAITAGILKGIRM
GILDDSYIDVADKAINAILKNIDSDGTVLNVSGGTGMGYDAEHYKNILIAPMAYGQSLTILALVEALQNDKKSI

Sequences:

>Translated_394_residues
MDCWDKNKIKTEDIYMNNKKPDKKEIENKLNLVIDKLMNLGRPDNDEELEKGGESIGFFKRDFGIKEWDWPQGVGLYGLL
KIMQINGNDEYREFLYKWFKENIAEGLPSKNINTTTPLLTLVELNNYYNDTQFEELCIKWAEWLMNCLPRTKERGFQHVT
SANGDRQGVRLNENEMWIDTLFMTVLFLNKMGQKYNRQDWINESIHQVLMHIKYLCDNKTGLFYHGWTFNEMNNFGGIFW
CRGNSWFTLGILDYVDMFKGTLNSGVKEIIIDAYKAQTAALKKLQSKSGLWHTVLTDSSSYEEVSGSAAITAGILKGIRM
GILDDSYIDVADKAINAILKNIDSDGTVLNVSGGTGMGYDAEHYKNILIAPMAYGQSLTILALVEALQNDKKSI
>Mature_394_residues
MDCWDKNKIKTEDIYMNNKKPDKKEIENKLNLVIDKLMNLGRPDNDEELEKGGESIGFFKRDFGIKEWDWPQGVGLYGLL
KIMQINGNDEYREFLYKWFKENIAEGLPSKNINTTTPLLTLVELNNYYNDTQFEELCIKWAEWLMNCLPRTKERGFQHVT
SANGDRQGVRLNENEMWIDTLFMTVLFLNKMGQKYNRQDWINESIHQVLMHIKYLCDNKTGLFYHGWTFNEMNNFGGIFW
CRGNSWFTLGILDYVDMFKGTLNSGVKEIIIDAYKAQTAALKKLQSKSGLWHTVLTDSSSYEEVSGSAAITAGILKGIRM
GILDDSYIDVADKAINAILKNIDSDGTVLNVSGGTGMGYDAEHYKNILIAPMAYGQSLTILALVEALQNDKKSI

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 45101; Mature: 45101

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCWDKNKIKTEDIYMNNKKPDKKEIENKLNLVIDKLMNLGRPDNDEELEKGGESIGFFK
CCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHH
RDFGIKEWDWPQGVGLYGLLKIMQINGNDEYREFLYKWFKENIAEGLPSKNINTTTPLLT
HHCCCCCCCCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LVELNNYYNDTQFEELCIKWAEWLMNCLPRTKERGFQHVTSANGDRQGVRLNENEMWIDT
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCHHHHHH
LFMTVLFLNKMGQKYNRQDWINESIHQVLMHIKYLCDNKTGLFYHGWTFNEMNNFGGIFW
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCEEE
CRGNSWFTLGILDYVDMFKGTLNSGVKEIIIDAYKAQTAALKKLQSKSGLWHTVLTDSSS
ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
YEEVSGSAAITAGILKGIRMGILDDSYIDVADKAINAILKNIDSDGTVLNVSGGTGMGYD
HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
AEHYKNILIAPMAYGQSLTILALVEALQNDKKSI
HHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDCWDKNKIKTEDIYMNNKKPDKKEIENKLNLVIDKLMNLGRPDNDEELEKGGESIGFFK
CCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHH
RDFGIKEWDWPQGVGLYGLLKIMQINGNDEYREFLYKWFKENIAEGLPSKNINTTTPLLT
HHCCCCCCCCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LVELNNYYNDTQFEELCIKWAEWLMNCLPRTKERGFQHVTSANGDRQGVRLNENEMWIDT
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCHHHHHH
LFMTVLFLNKMGQKYNRQDWINESIHQVLMHIKYLCDNKTGLFYHGWTFNEMNNFGGIFW
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCEEE
CRGNSWFTLGILDYVDMFKGTLNSGVKEIIIDAYKAQTAALKKLQSKSGLWHTVLTDSSS
ECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
YEEVSGSAAITAGILKGIRMGILDDSYIDVADKAINAILKNIDSDGTVLNVSGGTGMGYD
HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
AEHYKNILIAPMAYGQSLTILALVEALQNDKKSI
HHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]