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The map label for this gene is ygiK [H]

Identifier: 238921992

GI number: 238921992

Start: 186854

End: 188188

Strand: Reverse

Name: ygiK [H]

Synonym: EUBELI_20227

Alternate gene names: 238921992

Gene position: 188188-186854 (Counterclockwise)

Preceding gene: 238921993

Following gene: 238921991

Centisome position: 30.03

GC content: 36.85

Gene sequence:

>1335_bases
ATGCATATATATGCAGAAGGAGGCAATATGGAAATACAGGCAGCAATTGTATTGATAATAGTATTCTTTTTATTACTGGC
ATTTAGTGTTCCAGTATCATTCAGTATTATATCAGCATCACTTGTTACATTAATTATGTTTCTTACACCACATTTTGGTG
TGTTTATATCAGCTCAGAAAATGGTTACAGGTATTGACAGCTTCACATTACTTGCAGTTCCGTTCTTTGTACTTGCAGGT
CTGTTAATGAGTAATGGTGGTATAGCAAAAAGGCTTATTAATCTGGCAATGCTTGTTTTAGGTAAGGTTCCAGGTTCTTT
AGCAATGACTAACATTGCAGGTAACGCAATGTTTGGTTCTATATCAGGCTCAGGTATTGCAGCAGCAACAGCAATTGGTG
GTGTTATGCAGCCACTTGAGAATGAACAGGGATATGACAGGGCATTTTCAGCAGCAGCAAATGTTGCTTCAGCACCAGTA
GGACAGTTAATTCCACCAACAGCTTCATTCATTGTATTTTCAGCAGCAAGTGGTGGAGTTTCAGTTGCAGCATTACTTAT
GGCTGGCTGGATTCCGGGATTATTATGGGCATTACTGTGTATGGTAGTTGCTTTCGTATATGGAAAAAAGCATGGATATG
TAATCAAGAGAGATCATCTTACAGCTAAGGTTGTATTAAAGACAATCTGGGATGCTATACCAAGTCTTTTCCTCATTGTA
ATTATTATTGGTGGTATATTATCAGGATATTTTACTCCGACAGAAGCATCTGGTGTAGCTGTTGTGTATGCATTTATACT
GGCTGTGTTTGTTTATAAGAGCATTAAGATTAAAGATATTCCAAGAATTTTAAAAGAAACAGCAGTTATGACAGCAATAG
TTATGCTTATAATAGGAGCTTCATCAGTATTGTCATTCGTATTATCATTCACAGGTCTTCCACAGGCTATAAGTGCAGCA
TTACTGGGTGTGTCTGATAATAAGATTGTTATTCTGTTAATTATTAACCTGATACTTCTGATTGTAGGAACATTTATGGA
TATGGCTCCGGCGTTACTTATATTCACACCTATATTCCTTCCTGTAGTTAAGGCATTAGGTATGAATCCTATTCAGTTTG
GTGTAATGATGGTTATGAATCTTTCAATTGGAACAATTACACCACCTGTAGGAAGCGTATTATTTGTAGGTTGTAGTATA
TCGCATCTTCAGGTAGAAGAGGTAATTAAGAAACTGGTGCCATTCTTTGTAGCAATTTTGGTCGCACTTCTTTTTGTAAC
ATTTGTACCACAGCTTAGTATGTGGCTGCCAACAGTATTTGGATTGTTGGGATAA

Upstream 100 bases:

>100_bases
TTATGTATGTGTTCCGGTATGTGGAGTTCTCATGGTTATTTACGGAGTGTTTAAGATTGTAGATCATTTTAAGAAATTAA
GACAGAATTAAGATTGAATA

Downstream 100 bases:

>100_bases
AAATAAGATAAAAACGGAGGACATATATATGAACAATAAAAAACCTGACAAGAAAGAAATTGAGAATAAGCTTAATCTTG
TAATTGATAAGCTTATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MHIYAEGGNMEIQAAIVLIIVFFLLLAFSVPVSFSIISASLVTLIMFLTPHFGVFISAQKMVTGIDSFTLLAVPFFVLAG
LLMSNGGIAKRLINLAMLVLGKVPGSLAMTNIAGNAMFGSISGSGIAAATAIGGVMQPLENEQGYDRAFSAAANVASAPV
GQLIPPTASFIVFSAASGGVSVAALLMAGWIPGLLWALLCMVVAFVYGKKHGYVIKRDHLTAKVVLKTIWDAIPSLFLIV
IIIGGILSGYFTPTEASGVAVVYAFILAVFVYKSIKIKDIPRILKETAVMTAIVMLIIGASSVLSFVLSFTGLPQAISAA
LLGVSDNKIVILLIINLILLIVGTFMDMAPALLIFTPIFLPVVKALGMNPIQFGVMMVMNLSIGTITPPVGSVLFVGCSI
SHLQVEEVIKKLVPFFVAILVALLFVTFVPQLSMWLPTVFGLLG

Sequences:

>Translated_444_residues
MHIYAEGGNMEIQAAIVLIIVFFLLLAFSVPVSFSIISASLVTLIMFLTPHFGVFISAQKMVTGIDSFTLLAVPFFVLAG
LLMSNGGIAKRLINLAMLVLGKVPGSLAMTNIAGNAMFGSISGSGIAAATAIGGVMQPLENEQGYDRAFSAAANVASAPV
GQLIPPTASFIVFSAASGGVSVAALLMAGWIPGLLWALLCMVVAFVYGKKHGYVIKRDHLTAKVVLKTIWDAIPSLFLIV
IIIGGILSGYFTPTEASGVAVVYAFILAVFVYKSIKIKDIPRILKETAVMTAIVMLIIGASSVLSFVLSFTGLPQAISAA
LLGVSDNKIVILLIINLILLIVGTFMDMAPALLIFTPIFLPVVKALGMNPIQFGVMMVMNLSIGTITPPVGSVLFVGCSI
SHLQVEEVIKKLVPFFVAILVALLFVTFVPQLSMWLPTVFGLLG
>Mature_444_residues
MHIYAEGGNMEIQAAIVLIIVFFLLLAFSVPVSFSIISASLVTLIMFLTPHFGVFISAQKMVTGIDSFTLLAVPFFVLAG
LLMSNGGIAKRLINLAMLVLGKVPGSLAMTNIAGNAMFGSISGSGIAAATAIGGVMQPLENEQGYDRAFSAAANVASAPV
GQLIPPTASFIVFSAASGGVSVAALLMAGWIPGLLWALLCMVVAFVYGKKHGYVIKRDHLTAKVVLKTIWDAIPSLFLIV
IIIGGILSGYFTPTEASGVAVVYAFILAVFVYKSIKIKDIPRILKETAVMTAIVMLIIGASSVLSFVLSFTGLPQAISAA
LLGVSDNKIVILLIINLILLIVGTFMDMAPALLIFTPIFLPVVKALGMNPIQFGVMMVMNLSIGTITPPVGSVLFVGCSI
SHLQVEEVIKKLVPFFVAILVALLFVTFVPQLSMWLPTVFGLLG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=411, Percent_Identity=33.5766423357664, Blast_Score=210, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46796; Mature: 46796

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIYAEGGNMEIQAAIVLIIVFFLLLAFSVPVSFSIISASLVTLIMFLTPHFGVFISAQK
CEEEECCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHEEEHHH
MVTGIDSFTLLAVPFFVLAGLLMSNGGIAKRLINLAMLVLGKVPGSLAMTNIAGNAMFGS
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEC
ISGSGIAAATAIGGVMQPLENEQGYDRAFSAAANVASAPVGQLIPPTASFIVFSAASGGV
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCH
SVAALLMAGWIPGLLWALLCMVVAFVYGKKHGYVIKRDHLTAKVVLKTIWDAIPSLFLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
IIIGGILSGYFTPTEASGVAVVYAFILAVFVYKSIKIKDIPRILKETAVMTAIVMLIIGA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSVLSFVLSFTGLPQAISAALLGVSDNKIVILLIINLILLIVGTFMDMAPALLIFTPIFL
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVVKALGMNPIQFGVMMVMNLSIGTITPPVGSVLFVGCSISHLQVEEVIKKLVPFFVAIL
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VALLFVTFVPQLSMWLPTVFGLLG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHIYAEGGNMEIQAAIVLIIVFFLLLAFSVPVSFSIISASLVTLIMFLTPHFGVFISAQK
CEEEECCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHEEEHHH
MVTGIDSFTLLAVPFFVLAGLLMSNGGIAKRLINLAMLVLGKVPGSLAMTNIAGNAMFGS
HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEC
ISGSGIAAATAIGGVMQPLENEQGYDRAFSAAANVASAPVGQLIPPTASFIVFSAASGGV
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCCCH
SVAALLMAGWIPGLLWALLCMVVAFVYGKKHGYVIKRDHLTAKVVLKTIWDAIPSLFLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
IIIGGILSGYFTPTEASGVAVVYAFILAVFVYKSIKIKDIPRILKETAVMTAIVMLIIGA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSVLSFVLSFTGLPQAISAALLGVSDNKIVILLIINLILLIVGTFMDMAPALLIFTPIFL
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVVKALGMNPIQFGVMMVMNLSIGTITPPVGSVLFVGCSISHLQVEEVIKKLVPFFVAIL
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VALLFVTFVPQLSMWLPTVFGLLG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]