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The map label for this gene is rdoA [H]

Identifier: 238921715

GI number: 238921715

Start: 3756765

End: 3757751

Strand: Reverse

Name: rdoA [H]

Synonym: NT01EI_3877

Alternate gene names: 238921715

Gene position: 3757751-3756765 (Counterclockwise)

Preceding gene: 238921716

Following gene: 238921714

Centisome position: 98.57

GC content: 59.07

Gene sequence:

>987_bases
ATGACGACGTCGGCCTTTAATTTTCAGACTCTGACACCGGATCTCATCTTGGGTGCGCTGGAGAGTACGGGGATCCGCAT
TGATTCCGGTCTCAGTGAGCTGAACAGCTATGAAAACCGCGTCTATCAGCTGATGGATGAGGAGAGACGGCGCTATGTGG
TGAAATTCTATCGGCCCGAGCGTTGGAGCGATGCTCAGATCGCAGAGGAACACGCTTTCTCTGCCGAGCTGGCCGCGCAG
GAGATCCCGCTGGCGGCTCCGCTGTCCCTGAATGGCACCACGCTGCATCACTACCATGGATATGCCTTTGCTGTTTTCCC
CAGCCTGGGGGGCCGTGAGTATGAGGTCGATAGCCTCGACCAGCTGGAGTGGGTTGGGCGCTATCTGGGGCGTATCCATC
AGGTAGGCCGACGCCAGCTGTTTGGCTGTCGGCCTACCATTGGGCTGGACGAATATGTCTACCAGCCGCGGGCGCTGCTG
GCGGACAGCCCACTGGTGCCCGAAGCGCAGCGATCTGCGTTGCTATCGGCGTTAGATACGCTGATTGCGGTGTTGCTTCC
GTGCTGGCGGGATGATTTGCCGCAGCTGCGCCTGCACGGTGACTGCCACCCGGGAAATATACTGTGGCGCGATGGTCCAC
TGTTCGTCGATCTGGACGATGCGCGCAACGGCCCGGCGATCCAGGATTTGTGGATGCTACTGAATGGAGATGACGCAGAG
AAGCGCGTACAGCTGGATGTACTGCTGGAGGCCTACGGCGAATTCAGTAATTTCGATCTGCGCGAGCTGGCGCTGATTGA
GCCGCTGCGCGCCATGCGGATGATCCATTATGTGGCCTGGATCTGCCGTCGCTGGCAGGATCCTGCGTTTCCGCGCAGTT
TTCCCTGGATGGGCGAGACCCAGTTCTGGCTGCGTCAGATCCAGGTTTTTCAGGAGCAGGTCCGTCTGTTACAGGCCGCT
CCGCTACAGTTAACGCCGATGTATTGA

Upstream 100 bases:

>100_bases
AGTGAGAAGAGCGCGGTGATCCCAGGCCTGCAAAAAGACTATGAAGAGGATTTCAAAACGGCCCTACTGCGCGCGCGCGG
CGTGATTAAAGATTGATGCT

Downstream 100 bases:

>100_bases
CGACAGATCCCGAATAATGGAGAAGTGATAATGAAAAAGATGTGGCTGGCCCTGCTGGGCATGGTTATAGCGTTTGGCGT
ATCGGCTGCGCAGTTTACTA

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTTSAFNFQTLTPDLILGALESTGIRIDSGLSELNSYENRVYQLMDEERRRYVVKFYRPERWSDAQIAEEHAFSAELAAQ
EIPLAAPLSLNGTTLHHYHGYAFAVFPSLGGREYEVDSLDQLEWVGRYLGRIHQVGRRQLFGCRPTIGLDEYVYQPRALL
ADSPLVPEAQRSALLSALDTLIAVLLPCWRDDLPQLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDDAE
KRVQLDVLLEAYGEFSNFDLRELALIEPLRAMRMIHYVAWICRRWQDPAFPRSFPWMGETQFWLRQIQVFQEQVRLLQAA
PLQLTPMY

Sequences:

>Translated_328_residues
MTTSAFNFQTLTPDLILGALESTGIRIDSGLSELNSYENRVYQLMDEERRRYVVKFYRPERWSDAQIAEEHAFSAELAAQ
EIPLAAPLSLNGTTLHHYHGYAFAVFPSLGGREYEVDSLDQLEWVGRYLGRIHQVGRRQLFGCRPTIGLDEYVYQPRALL
ADSPLVPEAQRSALLSALDTLIAVLLPCWRDDLPQLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDDAE
KRVQLDVLLEAYGEFSNFDLRELALIEPLRAMRMIHYVAWICRRWQDPAFPRSFPWMGETQFWLRQIQVFQEQVRLLQAA
PLQLTPMY
>Mature_327_residues
TTSAFNFQTLTPDLILGALESTGIRIDSGLSELNSYENRVYQLMDEERRRYVVKFYRPERWSDAQIAEEHAFSAELAAQE
IPLAAPLSLNGTTLHHYHGYAFAVFPSLGGREYEVDSLDQLEWVGRYLGRIHQVGRRQLFGCRPTIGLDEYVYQPRALLA
DSPLVPEAQRSALLSALDTLIAVLLPCWRDDLPQLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDDAEK
RVQLDVLLEAYGEFSNFDLRELALIEPLRAMRMIHYVAWICRRWQDPAFPRSFPWMGETQFWLRQIQVFQEQVRLLQAAP
LQLTPMY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=63.109756097561, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 37819; Mature: 37687

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSAFNFQTLTPDLILGALESTGIRIDSGLSELNSYENRVYQLMDEERRRYVVKFYRPE
CCCCCCCCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
RWSDAQIAEEHAFSAELAAQEIPLAAPLSLNGTTLHHYHGYAFAVFPSLGGREYEVDSLD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEECCCCCCEECCCCHH
QLEWVGRYLGRIHQVGRRQLFGCRPTIGLDEYVYQPRALLADSPLVPEAQRSALLSALDT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHH
LIAVLLPCWRDDLPQLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDDAE
HHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCHH
KRVQLDVLLEAYGEFSNFDLRELALIEPLRAMRMIHYVAWICRRWQDPAFPRSFPWMGET
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
QFWLRQIQVFQEQVRLLQAAPLQLTPMY
HHHHHHHHHHHHHHHHHHCCCCEECCCC
>Mature Secondary Structure 
TTSAFNFQTLTPDLILGALESTGIRIDSGLSELNSYENRVYQLMDEERRRYVVKFYRPE
CCCCCCCCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
RWSDAQIAEEHAFSAELAAQEIPLAAPLSLNGTTLHHYHGYAFAVFPSLGGREYEVDSLD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEEECCCCCCEECCCCHH
QLEWVGRYLGRIHQVGRRQLFGCRPTIGLDEYVYQPRALLADSPLVPEAQRSALLSALDT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHH
LIAVLLPCWRDDLPQLRLHGDCHPGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDDAE
HHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCHH
KRVQLDVLLEAYGEFSNFDLRELALIEPLRAMRMIHYVAWICRRWQDPAFPRSFPWMGET
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
QFWLRQIQVFQEQVRLLQAAPLQLTPMY
HHHHHHHHHHHHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]