| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ppc
Identifier: 238921689
GI number: 238921689
Start: 3730694
End: 3733327
Strand: Direct
Name: ppc
Synonym: NT01EI_3850
Alternate gene names: 238921689
Gene position: 3730694-3733327 (Clockwise)
Preceding gene: 238921688
Following gene: 238921692
Centisome position: 97.86
GC content: 60.63
Gene sequence:
>2634_bases ATGAATGAGCAATATTCGGCGATGCGTGGCAATGTCAGCATGTTGGGCAAGCTGCTGGGCGATACCATCAAGGACGCGCT GGGAGAAGAGATCCTGGATCGCGTTGAAACTATCCGCAGACTGTCCAAGTCGTCACGCGCAGGCAATGAAGCCAGCCGAC AGGCGTTGCTGAACACACTGCAAAATCTTTCCAATGACGAGCTGTTGCCGGTGGCGCGCGCCTTCAGCCAGTTCCTCAAT CTGGCCAACGTCGCGGAGCAATATCACCGAATCTCCCCACACGGTGAGGCTGCCAGCAATCCCGATGCCCTATATCACCT GTTCACCCGACTGAAGAATAAAAATCTGGACGAGGCGCAAATCCGTCAGGCCGTCGATAACCTCTCCATCGAGCTGGTGC TGACCGCGCACCCCACCGAGATCGCTCGCCGTACGCTGATCCATAAACTGGTGGAGGTAAACACCTGCCTCAGCCAGCTC GATCATGACGATCTGGCCGACTATGAGCGTCACCAGATCATGCGCCGCCTACGCCAGCTGGTGGCCCAATCCTGGCACAC CGACGAGATCCGTAAAAATCGCCCTACGCCCATCGATGAAGCCAAATGGGGCTATGCCGTGGTCGAAAACAGCCTGTGGG AAGGCGTTCCCGCCTTCCTGCGCGAGTTTAATGAACAGCTGGAAAAATCCCTTGGCTACCAGCTACCGGTCGAAGCGGTG CCGGTGCGCTTCACCGCCTGGATGGGCGGCGATCGTGACGGTAACCCCAACGTCACCGCCGAGGTGACCCGCCGCGCCCT GCTGCTCAGCCGCTGGAAGGCCGCGGAGCTGTTCCTGCGCGATGTTCAGGTACTGGTATCAGAACTCTCCATGACCGTCT GTACACCGGAACTGCGGGCGCTGGCGGGCGAGCATACCCAAGAGCCCTACCGCGAGGTGTTAAAACGCCTGCGCCAGCAG TTAAACAATACGCTGACCTATCTGGACGCACGTCTGCGGGGAGAGCGCCTGCCACGCCCCGCCGATCTGCTGGTCAGCAA CGATCAGCTGTGGCAGCCGTTGCATACCTGCTACCGCTCGCTGAAGGCCTGTGGTATGGGGATCATCGCCAACGGACAGC TGTTAGATACTCTGCGCCGGGTCCACTGCTTCGGTGTGCCGTTGGTACGCATCGATATTCGCCAGGAAAGCACCCGCCAT ACCGAGGCGCTGGCCGAGCTGACCCGCTACTTGGGACTGGGCGACTATGAGACCTGGTCTGAAGAGGATAAGCAGACGTT CCTGCTGCGCGAGCTGAACTCCAAGCGCCCTCTGGTACCGCGTCACTGGACGCCGTCGCCGGAAACCAAAGAGGTGTTTG ACACCTGTCAGGTGATCGCCGAGGCGCCTGCCGGCGCCATCGCCGCCTATGTCATCTCGATGGCGCGCACCCCATCCGAT GTTCTGGCTGTCCACCTGCTGCTGAAAGAGGCGGGCTGCCCGTACAATCTGCCGGTTGTTCCGCTGTTCGAAACCCTCGA CGATCTGAACAATGCCGAGGCGGTGATGACACAGCTGCTGAGCATCGACTGGTACCGTGGTTTTATCCAGGGTAAACAGA TGGTAATGATCGGCTACTCTGACTCAGCCAAAGACGCCGGCGTAATGGCGGCCTCCTGGGCTCAATATCGTGCACAGGAA GCGCTGGTGCGCGTCTGTGACAATGCCGGGATCGCCCTGACCCTGTTTCATGGCCGCGGTGGCTCTATCGGCCGCGGCGG CGCGCCGGCGCACGATGCCCTGCTCTCTCAGCCGCCGGGAAGCCTGAAGAGCGGCCTACGCGTAACGGAACAGGGGGAGA TGATCCGCTTCAAACTCGGCCTGCCGGAGATCGCCGTCAGCAGCCTGACGCTGTACACCAGTGCTATTCTGGAGGCCAAT CTACTGCCACCGCCAGCGCCGAAGCAAGAGTGGCGTGATGTCATGGACGAGCTATCGCAGACCTCCTGCGCGCTTTATCG ACGCTATATCCGTAAAAATCCAGATTTTGTTCCTTACTTCCGCTCAGCGACTCCAGAGCTGGAGCTGGGTAAGCTGCCAC TGGGCTCACGCCCGGCTAAACGCCGCCCCAGCGGCGGCGTAGAGAGCCTGCGCGCAATCCCTTGGATCTTCGCCTGGACC CAAAACCGTCTGATGCTACCAGCCTGGCTGGGCGCCGGGACCGCGCTGGAGGAGGCCATGACCGAGGGGCACCGCGGCAC GCTGGAAAATATGTACCGTAGCTGGCCATTCTTCACCACCCGCATCGATATGCTGGAAATGGTGTTCGCGAAGTCCGATC TGTGGCTGGCCGAATACTACGATCAGCGCCTGGTTGACCCGGCCCTATGGCCGCTGGGCACAGAGCTGCGCCAACAGGTA CAGCGGGATATTCAGGCGGTACTGACCATCGCTGACACCGATCACCTGATGGCCGATCTGCCCTGGGCCGCAGAGTCTAT CGCTCTGCGTAACGTCTACACCGATCCGCTCAACGTCTTGCAGGCTGAACTACTCTACCGATCACGCCACCAGGAACAGC CGGATGCCAACGTCGAACAGGCGCTGATGGTCACTATCGCCGGAGTCGCCGCCGGGATGCGCAATACCGGCTAG
Upstream 100 bases:
>100_bases TTGTGTCAATTGACGCAGGGGACGGAACGTGGCTTTATAAAGAGGCACTCTACAATTTCCGAGTGAAAGAAATTTACGTA TTGGGAGGGGCTGTGGTTCT
Downstream 100 bases:
>100_bases CCGCGATGCAAAGGAAAAAGCCCGCGGCCGCGGGCTTTTTTTGCCTATCACGACGCCACGCCACCCTGTGGCCGTACGCC CAGCGTATGGCAAATGGCAT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase
Number of amino acids: Translated: 877; Mature: 877
Protein sequence:
>877_residues MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLN LANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQL DHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQ LNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRH TEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQE ALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEAN LLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQV QRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG
Sequences:
>Translated_877_residues MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLN LANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQL DHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQ LNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRH TEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQE ALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEAN LLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQV QRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG >Mature_877_residues MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLN LANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQL DHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQ LNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRH TEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQE ALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEAN LLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQV QRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family
Homologues:
Organism=Escherichia coli, GI1790393, Length=883, Percent_Identity=77.2366930917327, Blast_Score=1394, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): CAPP_EDWI9 (C5BC63)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002935204.1 - GeneID: 7959891 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3850 - OMA: AIPWVFG - ProtClustDB: PRK00009 - HAMAP: MF_00595 - InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 - PRINTS: PR00150
Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =4.1.1.31
Molecular weight: Translated: 98770; Mature: 98770
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2
Important sites: ACT_SITE 137-137 ACT_SITE 544-544
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTL CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QNLSNDELLPVARAFSQFLNLANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH IRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQLDHDDLADYERHQIMRRLRQL HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV HHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHC PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRA CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LAGEHTQEPYREVLKRLRQQLNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHH LKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRHTEALAELTRYLGLGDYETWS HHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC EEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYS HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC DSAKDAGVMAASWAQYRAQEALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCC SLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEANLLPPPAPKQEWRDVMDELSQ HHHHCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT HHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEC QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYY CCCEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH DQRLVDPALWPLGTELRQQVQRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVL HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHH QAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTL CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QNLSNDELLPVARAFSQFLNLANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH IRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQLDHDDLADYERHQIMRRLRQL HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV HHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHC PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRA CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LAGEHTQEPYREVLKRLRQQLNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHH LKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRHTEALAELTRYLGLGDYETWS HHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC EEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYS HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC DSAKDAGVMAASWAQYRAQEALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCC SLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEANLLPPPAPKQEWRDVMDELSQ HHHHCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT HHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEC QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYY CCCEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH DQRLVDPALWPLGTELRQQVQRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVL HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHH QAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA