Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is ppc

Identifier: 238921689

GI number: 238921689

Start: 3730694

End: 3733327

Strand: Direct

Name: ppc

Synonym: NT01EI_3850

Alternate gene names: 238921689

Gene position: 3730694-3733327 (Clockwise)

Preceding gene: 238921688

Following gene: 238921692

Centisome position: 97.86

GC content: 60.63

Gene sequence:

>2634_bases
ATGAATGAGCAATATTCGGCGATGCGTGGCAATGTCAGCATGTTGGGCAAGCTGCTGGGCGATACCATCAAGGACGCGCT
GGGAGAAGAGATCCTGGATCGCGTTGAAACTATCCGCAGACTGTCCAAGTCGTCACGCGCAGGCAATGAAGCCAGCCGAC
AGGCGTTGCTGAACACACTGCAAAATCTTTCCAATGACGAGCTGTTGCCGGTGGCGCGCGCCTTCAGCCAGTTCCTCAAT
CTGGCCAACGTCGCGGAGCAATATCACCGAATCTCCCCACACGGTGAGGCTGCCAGCAATCCCGATGCCCTATATCACCT
GTTCACCCGACTGAAGAATAAAAATCTGGACGAGGCGCAAATCCGTCAGGCCGTCGATAACCTCTCCATCGAGCTGGTGC
TGACCGCGCACCCCACCGAGATCGCTCGCCGTACGCTGATCCATAAACTGGTGGAGGTAAACACCTGCCTCAGCCAGCTC
GATCATGACGATCTGGCCGACTATGAGCGTCACCAGATCATGCGCCGCCTACGCCAGCTGGTGGCCCAATCCTGGCACAC
CGACGAGATCCGTAAAAATCGCCCTACGCCCATCGATGAAGCCAAATGGGGCTATGCCGTGGTCGAAAACAGCCTGTGGG
AAGGCGTTCCCGCCTTCCTGCGCGAGTTTAATGAACAGCTGGAAAAATCCCTTGGCTACCAGCTACCGGTCGAAGCGGTG
CCGGTGCGCTTCACCGCCTGGATGGGCGGCGATCGTGACGGTAACCCCAACGTCACCGCCGAGGTGACCCGCCGCGCCCT
GCTGCTCAGCCGCTGGAAGGCCGCGGAGCTGTTCCTGCGCGATGTTCAGGTACTGGTATCAGAACTCTCCATGACCGTCT
GTACACCGGAACTGCGGGCGCTGGCGGGCGAGCATACCCAAGAGCCCTACCGCGAGGTGTTAAAACGCCTGCGCCAGCAG
TTAAACAATACGCTGACCTATCTGGACGCACGTCTGCGGGGAGAGCGCCTGCCACGCCCCGCCGATCTGCTGGTCAGCAA
CGATCAGCTGTGGCAGCCGTTGCATACCTGCTACCGCTCGCTGAAGGCCTGTGGTATGGGGATCATCGCCAACGGACAGC
TGTTAGATACTCTGCGCCGGGTCCACTGCTTCGGTGTGCCGTTGGTACGCATCGATATTCGCCAGGAAAGCACCCGCCAT
ACCGAGGCGCTGGCCGAGCTGACCCGCTACTTGGGACTGGGCGACTATGAGACCTGGTCTGAAGAGGATAAGCAGACGTT
CCTGCTGCGCGAGCTGAACTCCAAGCGCCCTCTGGTACCGCGTCACTGGACGCCGTCGCCGGAAACCAAAGAGGTGTTTG
ACACCTGTCAGGTGATCGCCGAGGCGCCTGCCGGCGCCATCGCCGCCTATGTCATCTCGATGGCGCGCACCCCATCCGAT
GTTCTGGCTGTCCACCTGCTGCTGAAAGAGGCGGGCTGCCCGTACAATCTGCCGGTTGTTCCGCTGTTCGAAACCCTCGA
CGATCTGAACAATGCCGAGGCGGTGATGACACAGCTGCTGAGCATCGACTGGTACCGTGGTTTTATCCAGGGTAAACAGA
TGGTAATGATCGGCTACTCTGACTCAGCCAAAGACGCCGGCGTAATGGCGGCCTCCTGGGCTCAATATCGTGCACAGGAA
GCGCTGGTGCGCGTCTGTGACAATGCCGGGATCGCCCTGACCCTGTTTCATGGCCGCGGTGGCTCTATCGGCCGCGGCGG
CGCGCCGGCGCACGATGCCCTGCTCTCTCAGCCGCCGGGAAGCCTGAAGAGCGGCCTACGCGTAACGGAACAGGGGGAGA
TGATCCGCTTCAAACTCGGCCTGCCGGAGATCGCCGTCAGCAGCCTGACGCTGTACACCAGTGCTATTCTGGAGGCCAAT
CTACTGCCACCGCCAGCGCCGAAGCAAGAGTGGCGTGATGTCATGGACGAGCTATCGCAGACCTCCTGCGCGCTTTATCG
ACGCTATATCCGTAAAAATCCAGATTTTGTTCCTTACTTCCGCTCAGCGACTCCAGAGCTGGAGCTGGGTAAGCTGCCAC
TGGGCTCACGCCCGGCTAAACGCCGCCCCAGCGGCGGCGTAGAGAGCCTGCGCGCAATCCCTTGGATCTTCGCCTGGACC
CAAAACCGTCTGATGCTACCAGCCTGGCTGGGCGCCGGGACCGCGCTGGAGGAGGCCATGACCGAGGGGCACCGCGGCAC
GCTGGAAAATATGTACCGTAGCTGGCCATTCTTCACCACCCGCATCGATATGCTGGAAATGGTGTTCGCGAAGTCCGATC
TGTGGCTGGCCGAATACTACGATCAGCGCCTGGTTGACCCGGCCCTATGGCCGCTGGGCACAGAGCTGCGCCAACAGGTA
CAGCGGGATATTCAGGCGGTACTGACCATCGCTGACACCGATCACCTGATGGCCGATCTGCCCTGGGCCGCAGAGTCTAT
CGCTCTGCGTAACGTCTACACCGATCCGCTCAACGTCTTGCAGGCTGAACTACTCTACCGATCACGCCACCAGGAACAGC
CGGATGCCAACGTCGAACAGGCGCTGATGGTCACTATCGCCGGAGTCGCCGCCGGGATGCGCAATACCGGCTAG

Upstream 100 bases:

>100_bases
TTGTGTCAATTGACGCAGGGGACGGAACGTGGCTTTATAAAGAGGCACTCTACAATTTCCGAGTGAAAGAAATTTACGTA
TTGGGAGGGGCTGTGGTTCT

Downstream 100 bases:

>100_bases
CCGCGATGCAAAGGAAAAAGCCCGCGGCCGCGGGCTTTTTTTGCCTATCACGACGCCACGCCACCCTGTGGCCGTACGCC
CAGCGTATGGCAAATGGCAT

Product: phosphoenolpyruvate carboxylase

Products: NA

Alternate protein names: PEPC; PEPCase

Number of amino acids: Translated: 877; Mature: 877

Protein sequence:

>877_residues
MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLN
LANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQL
DHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV
PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQ
LNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRH
TEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD
VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQE
ALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEAN
LLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT
QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQV
QRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG

Sequences:

>Translated_877_residues
MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLN
LANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQL
DHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV
PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQ
LNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRH
TEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD
VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQE
ALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEAN
LLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT
QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQV
QRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG
>Mature_877_residues
MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLN
LANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQL
DHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV
PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQ
LNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRH
TEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD
VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQE
ALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEAN
LLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT
QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQV
QRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG

Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle

COG id: COG2352

COG function: function code C; Phosphoenolpyruvate carboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEPCase type 1 family

Homologues:

Organism=Escherichia coli, GI1790393, Length=883, Percent_Identity=77.2366930917327, Blast_Score=1394, Evalue=0.0,

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): CAPP_EDWI9 (C5BC63)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002935204.1
- GeneID:   7959891
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3850
- OMA:   AIPWVFG
- ProtClustDB:   PRK00009
- HAMAP:   MF_00595
- InterPro:   IPR021135
- InterPro:   IPR018129
- InterPro:   IPR022805
- InterPro:   IPR015813
- PRINTS:   PR00150

Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat

EC number: =4.1.1.31

Molecular weight: Translated: 98770; Mature: 98770

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2

Important sites: ACT_SITE 137-137 ACT_SITE 544-544

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTL
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QNLSNDELLPVARAFSQFLNLANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
IRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQLDHDDLADYERHQIMRRLRQL
HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV
HHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHC
PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRA
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LAGEHTQEPYREVLKRLRQQLNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHH
LKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRHTEALAELTRYLGLGDYETWS
HHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
EEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD
CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC
DSAKDAGVMAASWAQYRAQEALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCC
SLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEANLLPPPAPKQEWRDVMDELSQ
HHHHCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT
HHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEC
QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYY
CCCEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
DQRLVDPALWPLGTELRQQVQRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVL
HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHH
QAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTL
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
QNLSNDELLPVARAFSQFLNLANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
IRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQLDHDDLADYERHQIMRRLRQL
HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAV
HHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHC
PVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRA
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LAGEHTQEPYREVLKRLRQQLNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCHHHHHHHHHHHHH
LKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRHTEALAELTRYLGLGDYETWS
HHHCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
EEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSD
CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH
VLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYS
HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC
DSAKDAGVMAASWAQYRAQEALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCC
SLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEANLLPPPAPKQEWRDVMDELSQ
HHHHCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
TSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWT
HHHHHHHHHHHCCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHEEEC
QNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYY
CCCEEEEHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
DQRLVDPALWPLGTELRQQVQRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVL
HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCHHHHH
QAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA