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The map label for this gene is yifE [H]

Identifier: 238921666

GI number: 238921666

Start: 3702556

End: 3702894

Strand: Reverse

Name: yifE [H]

Synonym: NT01EI_3822

Alternate gene names: 238921666

Gene position: 3702894-3702556 (Counterclockwise)

Preceding gene: 238921668

Following gene: 238921662

Centisome position: 97.13

GC content: 53.39

Gene sequence:

>339_bases
ATGGCGGAAAGCTTCCACACTACTCATCGTTTCTTTGATACCAAGCATTATCCGCGCGGCTTTTCGCGTCATGGTGACTT
TACGATCAAAGAGGCTCAGTTACTTGAGCATTTTGGGTATGCGTTTAATGAATTGGATCTCGGTACCCGCGAGGCGCAGA
CAGACGAAGAAGCACTGTTTGTTGCCGTATGCCGCGGTGAGCGCCAGCCGGCGACGGAGGCGGAGAAGGTATGGGCGAAG
TATGTCACCCGTATCCGTCGTCCCAAGCGCTTCCATACTCTCTCCGGCGGTAAGCCGCAGATGGAAGGAGCTGAAGACTA
CACCGAGTCAGATGATTAA

Upstream 100 bases:

>100_bases
TAATCATGATGATTTAAATGTTTTGTTTTACAGCTTGTCAAGGCTAACTAATACTCCGCGCCATAAATAGCACGGCCATA
GAGAATTAGGAGCGTGTCAG

Downstream 100 bases:

>100_bases
TAAAAAAGCGGGGCAATGTTTGCCCCGCTTTTTTATGTCTGCCATCCCAGCCAGAAGCGCCAGCGCGCCTGAAGCCATTT
AATTGGCGCAGTGCTCTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAESFHTTHRFFDTKHYPRGFSRHGDFTIKEAQLLEHFGYAFNELDLGTREAQTDEEALFVAVCRGERQPATEAEKVWAK
YVTRIRRPKRFHTLSGGKPQMEGAEDYTESDD

Sequences:

>Translated_112_residues
MAESFHTTHRFFDTKHYPRGFSRHGDFTIKEAQLLEHFGYAFNELDLGTREAQTDEEALFVAVCRGERQPATEAEKVWAK
YVTRIRRPKRFHTLSGGKPQMEGAEDYTESDD
>Mature_111_residues
AESFHTTHRFFDTKHYPRGFSRHGDFTIKEAQLLEHFGYAFNELDLGTREAQTDEEALFVAVCRGERQPATEAEKVWAKY
VTRIRRPKRFHTLSGGKPQMEGAEDYTESDD

Specific function: Unknown

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family [H]

Homologues:

Organism=Escherichia coli, GI2367277, Length=112, Percent_Identity=83.0357142857143, Blast_Score=199, Evalue=3e-53,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007335 [H]

Pfam domain/function: PF04219 DUF413 [H]

EC number: NA

Molecular weight: Translated: 13029; Mature: 12897

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESFHTTHRFFDTKHYPRGFSRHGDFTIKEAQLLEHFGYAFNELDLGTREAQTDEEALF
CCCCCCHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHEE
VAVCRGERQPATEAEKVWAKYVTRIRRPKRFHTLSGGKPQMEGAEDYTESDD
HEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AESFHTTHRFFDTKHYPRGFSRHGDFTIKEAQLLEHFGYAFNELDLGTREAQTDEEALF
CCCCCHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHEE
VAVCRGERQPATEAEKVWAKYVTRIRRPKRFHTLSGGKPQMEGAEDYTESDD
HEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]