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The map label for this gene is yibN [H]

Identifier: 238921662

GI number: 238921662

Start: 3697809

End: 3698246

Strand: Reverse

Name: yibN [H]

Synonym: NT01EI_3818

Alternate gene names: 238921662

Gene position: 3698246-3697809 (Counterclockwise)

Preceding gene: 238921666

Following gene: 238921661

Centisome position: 97.01

GC content: 54.11

Gene sequence:

>438_bases
ATGCAAATGCAAGAGATTATGCAATTCGTCACTGCCCACCCCGTGCTGAGCGTGGCGTGGATTGTGCTGTTTGTGGCGGT
TGTCGTCATGACCCTTAAAAGCCGTTTCTCTAAAGTGAAAGAGGTGAGTCGCGGCCAGGCGACCCATCTGATCAATAAAG
AAGACGCCGTTGTCGTCGATACCCGGACGCGTGAAGAGTACCGCAAAGGGCATATCGCCAACGCCGTAAACCTGACGCCG
AGCGAGCTGAAAAGCGGTAGCCTCGGTGAGCTGGATAAGCATAAGTCACAGCCGGTGATCGTCGTATGCGCTAACGGTAT
GACCTCCCGTCAGTCCGGCGAACATCTGGTTAACGCCGGGTTTGCTCAGGTATATTCTCTAAAAGACGGCATCGTCGGCT
GGCAGGGTGATAATCTGCCCTTAGCCCGCGGTAAATAA

Upstream 100 bases:

>100_bases
CAGCGTCCGGCGCTCGGTAATCGGCTGTATTTGGAGCGAGGCAAAGGTATACTCTGATCCCTTGATTTAGCCCTTAACCG
ATCGGGAGTAGTAACCCCCC

Downstream 100 bases:

>100_bases
GCGGATATTGACTGAGGAGCCATCATGGCTCATGTTGAAATTTATACCAAAGCGACCTGCCCATTTTGCCTGCGCGCCAA
GGCGCTGCTGACGGCCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQMQEIMQFVTAHPVLSVAWIVLFVAVVVMTLKSRFSKVKEVSRGQATHLINKEDAVVVDTRTREEYRKGHIANAVNLTP
SELKSGSLGELDKHKSQPVIVVCANGMTSRQSGEHLVNAGFAQVYSLKDGIVGWQGDNLPLARGK

Sequences:

>Translated_145_residues
MQMQEIMQFVTAHPVLSVAWIVLFVAVVVMTLKSRFSKVKEVSRGQATHLINKEDAVVVDTRTREEYRKGHIANAVNLTP
SELKSGSLGELDKHKSQPVIVVCANGMTSRQSGEHLVNAGFAQVYSLKDGIVGWQGDNLPLARGK
>Mature_145_residues
MQMQEIMQFVTAHPVLSVAWIVLFVAVVVMTLKSRFSKVKEVSRGQATHLINKEDAVVVDTRTREEYRKGHIANAVNLTP
SELKSGSLGELDKHKSQPVIVVCANGMTSRQSGEHLVNAGFAQVYSLKDGIVGWQGDNLPLARGK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=62.2377622377622, Blast_Score=192, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15927; Mature: 15927

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMQEIMQFVTAHPVLSVAWIVLFVAVVVMTLKSRFSKVKEVSRGQATHLINKEDAVVVD
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEE
TRTREEYRKGHIANAVNLTPSELKSGSLGELDKHKSQPVIVVCANGMTSRQSGEHLVNAG
CCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHCCCCCEEEEECCCCCCCCCCHHHHHHH
FAQVYSLKDGIVGWQGDNLPLARGK
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQMQEIMQFVTAHPVLSVAWIVLFVAVVVMTLKSRFSKVKEVSRGQATHLINKEDAVVVD
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEE
TRTREEYRKGHIANAVNLTPSELKSGSLGELDKHKSQPVIVVCANGMTSRQSGEHLVNAG
CCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHCCCCCEEEEECCCCCCCCCCHHHHHHH
FAQVYSLKDGIVGWQGDNLPLARGK
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]