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The map label for this gene is yibP [H]

Identifier: 238921664

GI number: 238921664

Start: 3700179

End: 3701531

Strand: Direct

Name: yibP [H]

Synonym: NT01EI_3820

Alternate gene names: 238921664

Gene position: 3700179-3701531 (Clockwise)

Preceding gene: 238921663

Following gene: 238921665

Centisome position: 97.06

GC content: 59.28

Gene sequence:

>1353_bases
ATGAGGGGAAAATATCTGTTTTACATACCCAGCGCAGGCTCAGCGCCATCCGTCGGGAATACCCCGTGCGCCGCTCCGGC
GGCGCACGCGTTCCGCGTCGCCTCACCCCTGCTGCCCATCTTCTGTGCCAGCGCACTGTTCGTCGGCATCAGCCTTTTCC
CCTGCGCCGCATTTAGCGCAGACAACAACAAACAACAGCTGCAGTCTATCCAGCAGGACATCGCTGAAAAAGAGAAAAGC
GTTAAACAGCAGCAGCAGCAGCGTGCATCCCTGCAAGAACAGTTAAAAGCCCAAGAAAAACAAATAGCTCAGGCCGGAAG
ATCGCTGCACGATACCCAGTCTGAACTCACCCTGCTAGAGCAGCGGGTGACTGAACTCAGCACTTCTATCCGAAAACTGC
AAAGTAAAGAGAATGGCCAGAGTAAACTGTTAGCACAGCAGCTGGATATGGCGTTTCGTCTCGGCCGCCATACCGGGATG
CAGGTTCTGCTCAACGGTGAAGAGAACCAGCGCAGCGAACGACTGCTGTCCTATTTCGGCTATCTGAACATCGCCCGCCA
GCAGAATATCACCTCGCTGCAGGAGACCCGTACCGATCTCAGCCAGCAAAAGCGTGAGCTGGAAGGTGCCAAGAGCAAGC
AAAAAGAGGTTCTGGCCACTCAGCAACAGGCTCAGCAGCTGCTGCAACAGGCGCGCGCCAACCGTCAAAAAACGCTGATG
GCACTAGAGAGTTCTCTGGCCAAGGATCAGCAGCAGCTCGGTGAGCTACGCCAAAATGAAACCCGCCTGCGCGACAAGAT
AGCCCGCGCCGAACGAGAGGCCCGCGCCCGCGCCGAACGCGAAGCGCGTGAAGCCGCCCGCGTTCGGGCCGAAATGAAAG
CGAAAGAAGCCCAGGCCAAGAAAAAAGGCACCACCTATAAACCCAGCGAAAACGAGCGGGCGCTGCTGGCCAGAACCGGC
GGCCTGGGACGCCCGGCAGGCCAGGCGAGCTGGCCGGTACGGGGACGCACTATCCATGGCTTTGGTGAGCCGTTGCAGGG
TGAACTGCGCTGGAAAGGCATGGTCATTGCCGCACCGGAGGGCAGCGAAGTCCACGCCATCGCCGACGGCCGCGTGCTGC
TGGCAGACTGGCTCCAAGGGTATGGGCTGGTGGTGGTCATTGAACACGGCAAAGGCGATATGAGTCTGTATGGCTATAAC
CAGAGCGCATTGGTTAACGTCGGCGCACAGGTCAAAGCCGGGCAGCCGATTGCGCTGGTCGGTGACAGCGGTGGTCAGGG
GCAGTCGGCCCTGTACTTCGAAATTCGCCGTCAGGGACAGGCGGTGAATCCACGGCCGTGGTTGGGGCGCTAA

Upstream 100 bases:

>100_bases
ACTGTCCGATATCGCCCCGACCATGCTGACCCTGATGGGGATGGAGGTCCCGCAAGAGATGACTGGCAAGCCGCTGTTTA
TCGTGAAATAATCGATCCCC

Downstream 100 bases:

>100_bases
CGCTGGCGTCCATCGCTTCGCCATTATGCTGGTACAGAGAGAAGGAATAAGCCTTGCGCTCACTGATCCGTCTTAGTTCA
CTGGCGCTCCTTTGCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MRGKYLFYIPSAGSAPSVGNTPCAAPAAHAFRVASPLLPIFCASALFVGISLFPCAAFSADNNKQQLQSIQQDIAEKEKS
VKQQQQQRASLQEQLKAQEKQIAQAGRSLHDTQSELTLLEQRVTELSTSIRKLQSKENGQSKLLAQQLDMAFRLGRHTGM
QVLLNGEENQRSERLLSYFGYLNIARQQNITSLQETRTDLSQQKRELEGAKSKQKEVLATQQQAQQLLQQARANRQKTLM
ALESSLAKDQQQLGELRQNETRLRDKIARAEREARARAEREAREAARVRAEMKAKEAQAKKKGTTYKPSENERALLARTG
GLGRPAGQASWPVRGRTIHGFGEPLQGELRWKGMVIAAPEGSEVHAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYN
QSALVNVGAQVKAGQPIALVGDSGGQGQSALYFEIRRQGQAVNPRPWLGR

Sequences:

>Translated_450_residues
MRGKYLFYIPSAGSAPSVGNTPCAAPAAHAFRVASPLLPIFCASALFVGISLFPCAAFSADNNKQQLQSIQQDIAEKEKS
VKQQQQQRASLQEQLKAQEKQIAQAGRSLHDTQSELTLLEQRVTELSTSIRKLQSKENGQSKLLAQQLDMAFRLGRHTGM
QVLLNGEENQRSERLLSYFGYLNIARQQNITSLQETRTDLSQQKRELEGAKSKQKEVLATQQQAQQLLQQARANRQKTLM
ALESSLAKDQQQLGELRQNETRLRDKIARAEREARARAEREAREAARVRAEMKAKEAQAKKKGTTYKPSENERALLARTG
GLGRPAGQASWPVRGRTIHGFGEPLQGELRWKGMVIAAPEGSEVHAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYN
QSALVNVGAQVKAGQPIALVGDSGGQGQSALYFEIRRQGQAVNPRPWLGR
>Mature_450_residues
MRGKYLFYIPSAGSAPSVGNTPCAAPAAHAFRVASPLLPIFCASALFVGISLFPCAAFSADNNKQQLQSIQQDIAEKEKS
VKQQQQQRASLQEQLKAQEKQIAQAGRSLHDTQSELTLLEQRVTELSTSIRKLQSKENGQSKLLAQQLDMAFRLGRHTGM
QVLLNGEENQRSERLLSYFGYLNIARQQNITSLQETRTDLSQQKRELEGAKSKQKEVLATQQQAQQLLQQARANRQKTLM
ALESSLAKDQQQLGELRQNETRLRDKIARAEREARARAEREAREAARVRAEMKAKEAQAKKKGTTYKPSENERALLARTG
GLGRPAGQASWPVRGRTIHGFGEPLQGELRWKGMVIAAPEGSEVHAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYN
QSALVNVGAQVKAGQPIALVGDSGGQGQSALYFEIRRQGQAVNPRPWLGR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=412, Percent_Identity=61.6504854368932, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=42.0168067226891, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87082174, Length=127, Percent_Identity=35.4330708661417, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 49698; Mature: 49698

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKYLFYIPSAGSAPSVGNTPCAAPAAHAFRVASPLLPIFCASALFVGISLFPCAAFSA
CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNNKQQLQSIQQDIAEKEKSVKQQQQQRASLQEQLKAQEKQIAQAGRSLHDTQSELTLLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QRVTELSTSIRKLQSKENGQSKLLAQQLDMAFRLGRHTGMQVLLNGEENQRSERLLSYFG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
YLNIARQQNITSLQETRTDLSQQKRELEGAKSKQKEVLATQQQAQQLLQQARANRQKTLM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALESSLAKDQQQLGELRQNETRLRDKIARAEREARARAEREAREAARVRAEMKAKEAQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKGTTYKPSENERALLARTGGLGRPAGQASWPVRGRTIHGFGEPLQGELRWKGMVIAAPE
HCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECEEEEECCC
GSEVHAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVKAGQPIALV
CCCEEEEECCCEEHHHHHCCCCEEEEEECCCCCEEEEECCCCHHEECCCEEECCCCEEEE
GDSGGQGQSALYFEIRRQGQAVNPRPWLGR
ECCCCCCCCCEEHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRGKYLFYIPSAGSAPSVGNTPCAAPAAHAFRVASPLLPIFCASALFVGISLFPCAAFSA
CCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNNKQQLQSIQQDIAEKEKSVKQQQQQRASLQEQLKAQEKQIAQAGRSLHDTQSELTLLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QRVTELSTSIRKLQSKENGQSKLLAQQLDMAFRLGRHTGMQVLLNGEENQRSERLLSYFG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
YLNIARQQNITSLQETRTDLSQQKRELEGAKSKQKEVLATQQQAQQLLQQARANRQKTLM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALESSLAKDQQQLGELRQNETRLRDKIARAEREARARAEREAREAARVRAEMKAKEAQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKGTTYKPSENERALLARTGGLGRPAGQASWPVRGRTIHGFGEPLQGELRWKGMVIAAPE
HCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEECEEEEECCC
GSEVHAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVKAGQPIALV
CCCEEEEECCCEEHHHHHCCCCEEEEEECCCCCEEEEECCCCHHEECCCEEECCCCEEEE
GDSGGQGQSALYFEIRRQGQAVNPRPWLGR
ECCCCCCCCCEEHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]