| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is gpmI [H]
Identifier: 238921663
GI number: 238921663
Start: 3698625
End: 3700169
Strand: Direct
Name: gpmI [H]
Synonym: NT01EI_3819
Alternate gene names: 238921663
Gene position: 3698625-3700169 (Clockwise)
Preceding gene: 238921657
Following gene: 238921664
Centisome position: 97.02
GC content: 57.09
Gene sequence:
>1545_bases ATGTCGAACGCCAAAAAACCGATGGTTCTGGTGATCCTTGACGGCTATGGTTACCGTGAAGATCAGCAGGATAACGCAAT TCTCAACGCTAAGCGTCCGGTGATGAACCGCCTATGGGCTGAATATCCGCATACGCTGATCTCCGCATCCGGTCTGGATG TCGGCCTTCCGGACGGTCAGATGGGCAACTCCGAAGTCGGTCACGTCAACCTGGGCGCCGGGCGCATCGTATACCAGGAT CTGACCCGTCTGGATAAAGAGATCAAAGAGGGCGACTTTTACAGCAATGCCGCGCTGACCCGCGCCGTAGATGATGCCGT TGCCGCCGGTAAGGCTGTACACATCATGGGCCTGATGTCCCCTGGCGGCGTACACAGCCACGAAGACCATATCCTGGCGA TGGTTGATCTGGCAGCCCAGCGCGGTGCAGAGGCCATCTATCTGCACGCTTTCCTCGATGGTCGCGACACCCCGCCGCGT AGTGCGGAATCAACACTGAAACGATTCAATGACCATTTCACCGAGCTCGGCAAAGGGCGCATTGCCTCGCTAATCGGCCG TTACTACGCCATGGATCGCGACAACCGTTGGGATCGCGTCGAGCTGGCCTACGATCTGTTGACCGACGCCAAGGGTGAAT TCCACGCCGATAACGCCATCGATGGGCTGCAGGCTGCCTATGCCCGCGGTGAAAATGATGAGTTTGTTAAGCCGACCGTA ATCCGCACCTCGGACCAGGCCGACGCTGCGATGCAGGACGGCGACGCGCTGATCTTCATGAACTTCCGCGCTGACCGCGC GCGCCAGATCACCCGCGCCTTCGTTAACGCTGACTTCGACGGCTTCGCGCGCCGCAAAACCGTTAGGCTGGGTAGCTTTA TTATGCTGACCGAGTATGCTGCCGACATCAAGACCGAATGTGCCTACCCGCCGGCCTCGCTGAGCAATACCTTAGGTGAA TGGCTGATGAAGCATCATAAAACTCAGCTGCGTATCTCCGAAACCGAAAAATACGCCCACGTCACCTTCTTCTACAACGG CGGCGTAGAAGATCCGTTCAACGGTGAAGATCGTATCCTGATCAACTCACCGAAAGTCGCTACCTACGATCTACAGCCGG AGATGAGTTCGGCCGAGCTGACTGAAAAGCTGGTATCCGCCATCAGCAGCGGCAAGTATGACACCATCATCTGTAACTAT CCGAACGGCGACATGGTTGGCCACACCGGCGTTTACGATGCAGCGATCAAAGCCGTCGAGGCACTCGACATCTGTATTGG TCAGGTCGTTGACGCCGTTCAGAAAGCTGACGGGCAGTTGCTGATCACCGCCGACCACGGCAACGCGGAGCTGATGCGCG ATCAGGAAAGTGGTCAGCCGTATACGGCACACACCAACCTGCCAGTACCGCTGATCTACATCGGCAAGCAAGCCAGCGCT GTCGAAGGTGGGAAACTGTCCGATATCGCCCCGACCATGCTGACCCTGATGGGGATGGAGGTCCCGCAAGAGATGACTGG CAAGCCGCTGTTTATCGTGAAATAA
Upstream 100 bases:
>100_bases AGCGCCTGCCGCTCGCGCCAACTGGACAGCGCGGGCATAGTCCACACCGCGTATGCACGGCTATTCATTCTTGAACTTAT CAACATATGAGGTTGTTGCA
Downstream 100 bases:
>100_bases TCGATCCCCATGAGGGGAAAATATCTGTTTTACATACCCAGCGCAGGCTCAGCGCCATCCGTCGGGAATACCCCGTGCGC CGCTCCGGCGGCGCACGCGT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSNAKKPMVLVILDGYGYREDQQDNAILNAKRPVMNRLWAEYPHTLISASGLDVGLPDGQMGNSEVGHVNLGAGRIVYQD LTRLDKEIKEGDFYSNAALTRAVDDAVAAGKAVHIMGLMSPGGVHSHEDHILAMVDLAAQRGAEAIYLHAFLDGRDTPPR SAESTLKRFNDHFTELGKGRIASLIGRYYAMDRDNRWDRVELAYDLLTDAKGEFHADNAIDGLQAAYARGENDEFVKPTV IRTSDQADAAMQDGDALIFMNFRADRARQITRAFVNADFDGFARRKTVRLGSFIMLTEYAADIKTECAYPPASLSNTLGE WLMKHHKTQLRISETEKYAHVTFFYNGGVEDPFNGEDRILINSPKVATYDLQPEMSSAELTEKLVSAISSGKYDTIICNY PNGDMVGHTGVYDAAIKAVEALDICIGQVVDAVQKADGQLLITADHGNAELMRDQESGQPYTAHTNLPVPLIYIGKQASA VEGGKLSDIAPTMLTLMGMEVPQEMTGKPLFIVK
Sequences:
>Translated_514_residues MSNAKKPMVLVILDGYGYREDQQDNAILNAKRPVMNRLWAEYPHTLISASGLDVGLPDGQMGNSEVGHVNLGAGRIVYQD LTRLDKEIKEGDFYSNAALTRAVDDAVAAGKAVHIMGLMSPGGVHSHEDHILAMVDLAAQRGAEAIYLHAFLDGRDTPPR SAESTLKRFNDHFTELGKGRIASLIGRYYAMDRDNRWDRVELAYDLLTDAKGEFHADNAIDGLQAAYARGENDEFVKPTV IRTSDQADAAMQDGDALIFMNFRADRARQITRAFVNADFDGFARRKTVRLGSFIMLTEYAADIKTECAYPPASLSNTLGE WLMKHHKTQLRISETEKYAHVTFFYNGGVEDPFNGEDRILINSPKVATYDLQPEMSSAELTEKLVSAISSGKYDTIICNY PNGDMVGHTGVYDAAIKAVEALDICIGQVVDAVQKADGQLLITADHGNAELMRDQESGQPYTAHTNLPVPLIYIGKQASA VEGGKLSDIAPTMLTLMGMEVPQEMTGKPLFIVK >Mature_513_residues SNAKKPMVLVILDGYGYREDQQDNAILNAKRPVMNRLWAEYPHTLISASGLDVGLPDGQMGNSEVGHVNLGAGRIVYQDL TRLDKEIKEGDFYSNAALTRAVDDAVAAGKAVHIMGLMSPGGVHSHEDHILAMVDLAAQRGAEAIYLHAFLDGRDTPPRS AESTLKRFNDHFTELGKGRIASLIGRYYAMDRDNRWDRVELAYDLLTDAKGEFHADNAIDGLQAAYARGENDEFVKPTVI RTSDQADAAMQDGDALIFMNFRADRARQITRAFVNADFDGFARRKTVRLGSFIMLTEYAADIKTECAYPPASLSNTLGEW LMKHHKTQLRISETEKYAHVTFFYNGGVEDPFNGEDRILINSPKVATYDLQPEMSSAELTEKLVSAISSGKYDTIICNYP NGDMVGHTGVYDAAIKAVEALDICIGQVVDAVQKADGQLLITADHGNAELMRDQESGQPYTAHTNLPVPLIYIGKQASAV EGGKLSDIAPTMLTLMGMEVPQEMTGKPLFIVK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=515, Percent_Identity=79.8058252427184, Blast_Score=849, Evalue=0.0, Organism=Caenorhabditis elegans, GI32564249, Length=524, Percent_Identity=43.8931297709924, Blast_Score=432, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17507741, Length=524, Percent_Identity=43.8931297709924, Blast_Score=432, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56471; Mature: 56340
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAKKPMVLVILDGYGYREDQQDNAILNAKRPVMNRLWAEYPHTLISASGLDVGLPDGQ CCCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHCCHHHEECCCCCCCCCCCC MGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFYSNAALTRAVDDAVAAGKAVHIMGLMS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC PGGVHSHEDHILAMVDLAAQRGAEAIYLHAFLDGRDTPPRSAESTLKRFNDHFTELGKGR CCCCCCCCCCEEHEEHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHH IASLIGRYYAMDRDNRWDRVELAYDLLTDAKGEFHADNAIDGLQAAYARGENDEFVKPTV HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE IRTSDQADAAMQDGDALIFMNFRADRARQITRAFVNADFDGFARRKTVRLGSFIMLTEYA EECCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHEEECCCEEEEEHHH ADIKTECAYPPASLSNTLGEWLMKHHKTQLRISETEKYAHVTFFYNGGVEDPFNGEDRIL HHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEE INSPKVATYDLQPEMSSAELTEKLVSAISSGKYDTIICNYPNGDMVGHTGVYDAAIKAVE EECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH ALDICIGQVVDAVQKADGQLLITADHGNAELMRDQESGQPYTAHTNLPVPLIYIGKQASA HHHHHHHHHHHHHHHCCCCEEEEECCCCHHEECCCCCCCCEEEECCCCEEEEEECCCCCC VEGGKLSDIAPTMLTLMGMEVPQEMTGKPLFIVK CCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEC >Mature Secondary Structure SNAKKPMVLVILDGYGYREDQQDNAILNAKRPVMNRLWAEYPHTLISASGLDVGLPDGQ CCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHCCHHHEECCCCCCCCCCCC MGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFYSNAALTRAVDDAVAAGKAVHIMGLMS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC PGGVHSHEDHILAMVDLAAQRGAEAIYLHAFLDGRDTPPRSAESTLKRFNDHFTELGKGR CCCCCCCCCCEEHEEHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHH IASLIGRYYAMDRDNRWDRVELAYDLLTDAKGEFHADNAIDGLQAAYARGENDEFVKPTV HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE IRTSDQADAAMQDGDALIFMNFRADRARQITRAFVNADFDGFARRKTVRLGSFIMLTEYA EECCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHEEECCCEEEEEHHH ADIKTECAYPPASLSNTLGEWLMKHHKTQLRISETEKYAHVTFFYNGGVEDPFNGEDRIL HHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEE INSPKVATYDLQPEMSSAELTEKLVSAISSGKYDTIICNYPNGDMVGHTGVYDAAIKAVE EECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH ALDICIGQVVDAVQKADGQLLITADHGNAELMRDQESGQPYTAHTNLPVPLIYIGKQASA HHHHHHHHHHHHHHHCCCCEEEEECCCCHHEECCCCCCCCEEEECCCCEEEEEECCCCCC VEGGKLSDIAPTMLTLMGMEVPQEMTGKPLFIVK CCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA