| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is metL [H]
Identifier: 238921651
GI number: 238921651
Start: 3686592
End: 3689030
Strand: Direct
Name: metL [H]
Synonym: NT01EI_3806
Alternate gene names: 238921651
Gene position: 3686592-3689030 (Clockwise)
Preceding gene: 238921650
Following gene: 238921655
Centisome position: 96.7
GC content: 61.46
Gene sequence:
>2439_bases ATGAGTGCACAAGCGGTAACGGGGCAGCAGCAGGCAGATCGCCAACTGCATAAGTTCGGCGGCAGTAGCCTGGCAGACGT AAAGTGTTATTTGCGCGTCGCGGGGATCATGGCGGAATACAGCCGCCCCGGCGACATGATGGTCGTGTCGGCGGCGGGCA GCACCACTAATCAGCTGATCAGCTGGCTCAAGCTCAGCCAGAGCGATCGCATCTCTGCCCATCAGGTACAGCAAGCCCTG CGCCGTTACCAGAGCGAGCTGATTGTCGGCTTGCTGCCGCCGGAGATGGCGGAGCCGCTGCAGACGCACTTTATTCGGGA TCTTGAACGTCTGGCTGCGCTGCTGGATGGTGAGATGGATGAGGCGGCCTATGCCGAGGTGGTGGGCCATGGTGAGGTTT GGTCCGCCCGGCTGATGGCGGCGGTGCTTCAGAGCCAGGGCCTGGAGGCGACATGGCTGGATGCACGGGATTTCCTGTGC GCCGAGCACGCAGCCCAGCCACAGGTGGATGAAAGGCGCTCCTATCCACTGCTGCAGCAGCTGCTGGCCCAGCATCCGAA TAAACGTCTGGTGGTAACCGGCTTTATCAGTCGCAGCGGTGCGGGTGAAACGGTATTGCTTGGCCGTAACGGCTCTGACT ATTCAGCGACACAGATCGGTGCTCTGGCCGGCGTGCGGCGCGTGACTATCTGGAGCGATGTCGCCGGGGTTTACAGTGCC GATCCGCGTAAGGTGAAAGATGCCTGTCTACTGCCGCTGCTGCGTCTGGATGAGGCCAGCGAGCTGGCTCGCCTGGCTGC ACCGGTGCTGCATGCCCGCACGCTGCAGCCGGTGTCCGCCAGCGATATCGATCTGCAGCTGCGCTGCAGCTATCAGCCGC AGCAGGGGTCAACCCGCATTGAGCGGGTGCTGGCCAGCGGTAACGGCGCCAAGATTGTCACCAGCCATGACGATGTCTGC CTGATTGAGCTGCACGTTACCACTGGCCATGAGTTCAGTCATATACACCAAGAGGTAGAGCGTATTCTGACGCGCAGCCA GCTGCGTCCGCTGGCCAGTGGGATCCATCGCGATCGTGGATTGATTCAGTTGTGCTACACAGCAGAAGTGGTCGGCAGTG TATTTAAGCTGCTGGAGGAGTCGGCGATCCCGGGTCTGCTACAGCTACGCGAAGGTTTGGCGCTGGTGGCGATGGTCGGC GCCGGCGTATGCCGTAATCCACTGCATGCTCATCGTTTTTATCAGCAGCTTAAGGATCAGCCTGTCGAGTTTATCTGGCA GTCGGAAGAGAGCATCAGCCTGGTGGCGGTGTTACGCTGCGGCCCGACGGAGGCGCTGGTGCAGGGGCTACACAACTCGC TGTTTCGGGCAGAAAAACGCGTCGGCCTGGTTCTGTTTGGTAAGGGTAATATCGGTTCCCGCTGGCTGGAGTTGTTCGCG CGTGAACAGGGTAACCTGTCGGCGAGCAGTGGTTTCGAGTTTATTCTGACCGGGGTGGTCGACAGCAATCGCAGCCTGCT GAACTATGATGGGCTGGACGCCAGCCGAGCGCTGGCCTTCTTCGACGATGAAGCGCAGGTGCTGGATGAGGAGTCGCTGT TCCTGTGGATGCGAGCTCACCCCTATGATGATTTGGTGGTGCTCGATGTGACAGCCAGTCCCTCGCTGGCCCAGCAGTAC CGCGATTTTGCCAGCTATGGCTTTCATATGGTCAGCGCCAACAAGCTGGCCGGGGCCGCCGGCGGCCACGAATACCGCCA GATCCGTGATGCTTTTGAGAAAACCGGACGTCACTGGCTGTATAACGCGACCGTGGGCGCCGGGCTGCCGGTTAACTATA CCGTGCGCGATCTGCGCGACAGTGGCGATACGATTCTGTCCATCAGCGGCATTTTCTCCGGCACCCTCTCCTGGCTGTTT CTGCAGTTTGACGGCTCGATTCCCTTCAGCGCGCTGGTGGACCAGGCCTGGCAGCAGGGGCTGACGGAGCCCGACCCGCG GGTGGACCTTTCCGGCCAGGACGTGATGCGCAAGCTGGTGATCCTGGCGCGTGAGGCGGGATATGACATTGAGCCTGCCC AGGTCCGGGTCGAGTCCCTGGTGCCGGCCGGCGGCGAGCAGGGCTCTATCGATCACTTTTTTGAGAACAGCGAAGCGCTG GACGAGCAGATGCTGCAGCGTCTGGCGGCGGCCAATGAGATGGGGCTGGTGCTGCGCTACGTGGCGCGCTTTGATGCCAA CGGTAAGGCACGTGTTGGCGTTGAGGCCGTACGCCCGGAGCACCCATTGGCGTCACTGTTGCCGTGCGACAACGTGTTCG CGATTGAAAGCCGCTGGTATCGCGATAACCCGCTGGTGATCCGCGGCCCAGGCGCGGGGCGCGATGTTACCGCCGGTGCG ATTCAGTCCGATCTGAACCGTCTGGCGCGTCTGCTTTAG
Upstream 100 bases:
>100_bases TAGCGACAGCCTGCTGCGTATTTCCGTGGGTATTGAGGACGGTGATGATTTAATCGCTGATCTGGAACAGGCATTTCAGG CAGCAGCAACGAGGTAAGCG
Downstream 100 bases:
>100_bases AATAATGTACGCCCGGGGCGCCGGGCAGGGATTTCTCCTTGCGCCCGGCCCCCGGTTGTGGGGTATACTCCCGCCGCATC AATTGGAAGATCATCGTCCC
Product: bifunctional aspartate kinase II/homoserine dehydrogenase II
Products: NA
Alternate protein names: Aspartokinase II/homoserine dehydrogenase II; AKII-HDII; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MSAQAVTGQQQADRQLHKFGGSSLADVKCYLRVAGIMAEYSRPGDMMVVSAAGSTTNQLISWLKLSQSDRISAHQVQQAL RRYQSELIVGLLPPEMAEPLQTHFIRDLERLAALLDGEMDEAAYAEVVGHGEVWSARLMAAVLQSQGLEATWLDARDFLC AEHAAQPQVDERRSYPLLQQLLAQHPNKRLVVTGFISRSGAGETVLLGRNGSDYSATQIGALAGVRRVTIWSDVAGVYSA DPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYQPQQGSTRIERVLASGNGAKIVTSHDDVC LIELHVTTGHEFSHIHQEVERILTRSQLRPLASGIHRDRGLIQLCYTAEVVGSVFKLLEESAIPGLLQLREGLALVAMVG AGVCRNPLHAHRFYQQLKDQPVEFIWQSEESISLVAVLRCGPTEALVQGLHNSLFRAEKRVGLVLFGKGNIGSRWLELFA REQGNLSASSGFEFILTGVVDSNRSLLNYDGLDASRALAFFDDEAQVLDEESLFLWMRAHPYDDLVVLDVTASPSLAQQY RDFASYGFHMVSANKLAGAAGGHEYRQIRDAFEKTGRHWLYNATVGAGLPVNYTVRDLRDSGDTILSISGIFSGTLSWLF LQFDGSIPFSALVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPAQVRVESLVPAGGEQGSIDHFFENSEAL DEQMLQRLAAANEMGLVLRYVARFDANGKARVGVEAVRPEHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA IQSDLNRLARLL
Sequences:
>Translated_812_residues MSAQAVTGQQQADRQLHKFGGSSLADVKCYLRVAGIMAEYSRPGDMMVVSAAGSTTNQLISWLKLSQSDRISAHQVQQAL RRYQSELIVGLLPPEMAEPLQTHFIRDLERLAALLDGEMDEAAYAEVVGHGEVWSARLMAAVLQSQGLEATWLDARDFLC AEHAAQPQVDERRSYPLLQQLLAQHPNKRLVVTGFISRSGAGETVLLGRNGSDYSATQIGALAGVRRVTIWSDVAGVYSA DPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYQPQQGSTRIERVLASGNGAKIVTSHDDVC LIELHVTTGHEFSHIHQEVERILTRSQLRPLASGIHRDRGLIQLCYTAEVVGSVFKLLEESAIPGLLQLREGLALVAMVG AGVCRNPLHAHRFYQQLKDQPVEFIWQSEESISLVAVLRCGPTEALVQGLHNSLFRAEKRVGLVLFGKGNIGSRWLELFA REQGNLSASSGFEFILTGVVDSNRSLLNYDGLDASRALAFFDDEAQVLDEESLFLWMRAHPYDDLVVLDVTASPSLAQQY RDFASYGFHMVSANKLAGAAGGHEYRQIRDAFEKTGRHWLYNATVGAGLPVNYTVRDLRDSGDTILSISGIFSGTLSWLF LQFDGSIPFSALVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPAQVRVESLVPAGGEQGSIDHFFENSEAL DEQMLQRLAAANEMGLVLRYVARFDANGKARVGVEAVRPEHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA IQSDLNRLARLL >Mature_811_residues SAQAVTGQQQADRQLHKFGGSSLADVKCYLRVAGIMAEYSRPGDMMVVSAAGSTTNQLISWLKLSQSDRISAHQVQQALR RYQSELIVGLLPPEMAEPLQTHFIRDLERLAALLDGEMDEAAYAEVVGHGEVWSARLMAAVLQSQGLEATWLDARDFLCA EHAAQPQVDERRSYPLLQQLLAQHPNKRLVVTGFISRSGAGETVLLGRNGSDYSATQIGALAGVRRVTIWSDVAGVYSAD PRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYQPQQGSTRIERVLASGNGAKIVTSHDDVCL IELHVTTGHEFSHIHQEVERILTRSQLRPLASGIHRDRGLIQLCYTAEVVGSVFKLLEESAIPGLLQLREGLALVAMVGA GVCRNPLHAHRFYQQLKDQPVEFIWQSEESISLVAVLRCGPTEALVQGLHNSLFRAEKRVGLVLFGKGNIGSRWLELFAR EQGNLSASSGFEFILTGVVDSNRSLLNYDGLDASRALAFFDDEAQVLDEESLFLWMRAHPYDDLVVLDVTASPSLAQQYR DFASYGFHMVSANKLAGAAGGHEYRQIRDAFEKTGRHWLYNATVGAGLPVNYTVRDLRDSGDTILSISGIFSGTLSWLFL QFDGSIPFSALVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPAQVRVESLVPAGGEQGSIDHFFENSEALD EQMLQRLAAANEMGLVLRYVARFDANGKARVGVEAVRPEHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAI QSDLNRLARLL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the homoserine dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790376, Length=799, Percent_Identity=81.9774718397997, Blast_Score=1340, Evalue=0.0, Organism=Escherichia coli, GI1786183, Length=819, Percent_Identity=31.3797313797314, Blast_Score=333, Evalue=2e-92, Organism=Escherichia coli, GI1790455, Length=459, Percent_Identity=27.0152505446623, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322599, Length=346, Percent_Identity=33.2369942196532, Blast_Score=155, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320893, Length=501, Percent_Identity=21.5568862275449, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89213; Mature: 89082
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQAVTGQQQADRQLHKFGGSSLADVKCYLRVAGIMAEYSRPGDMMVVSAAGSTTNQLI CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH SWLKLSQSDRISAHQVQQALRRYQSELIVGLLPPEMAEPLQTHFIRDLERLAALLDGEMD HHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC EAAYAEVVGHGEVWSARLMAAVLQSQGLEATWLDARDFLCAEHAAQPQVDERRSYPLLQQ HHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCHHHCCCHHHHH LLAQHPNKRLVVTGFISRSGAGETVLLGRNGSDYSATQIGALAGVRRVTIWSDVAGVYSA HHHHCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCC DPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYQPQQGSTRI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHH ERVLASGNGAKIVTSHDDVCLIELHVTTGHEFSHIHQEVERILTRSQLRPLASGIHRDRG HHHHHCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LIQLCYTAEVVGSVFKLLEESAIPGLLQLREGLALVAMVGAGVCRNPLHAHRFYQQLKDQ CEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCC PVEFIWQSEESISLVAVLRCGPTEALVQGLHNSLFRAEKRVGLVLFGKGNIGSRWLELFA CHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH REQGNLSASSGFEFILTGVVDSNRSLLNYDGLDASRALAFFDDEAQVLDEESLFLWMRAH HHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHCEEEEECCCHHHCCCCCEEEEEECC PYDDLVVLDVTASPSLAQQYRDFASYGFHMVSANKLAGAAGGHEYRQIRDAFEKTGRHWL CCCCEEEEEECCCCHHHHHHHHHHHCCEEEEECCHHCCCCCCHHHHHHHHHHHHCCCEEE YNATVGAGLPVNYTVRDLRDSGDTILSISGIFSGTLSWLFLQFDGSIPFSALVDQAWQQG EEECCCCCCCCCCCHHHHCCCCCCEEEEHHHHHHCEEEEEEEECCCCCHHHHHHHHHHCC LTEPDPRVDLSGQDVMRKLVILAREAGYDIEPAQVRVESLVPAGGEQGSIDHFFENSEAL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHH DEQMLQRLAAANEMGLVLRYVARFDANGKARVGVEAVRPEHPLASLLPCDNVFAIESRWY HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCEECCCCCCHHHHCCCCCEEEECCCEE RDNPLVIRGPGAGRDVTAGAIQSDLNRLARLL CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure SAQAVTGQQQADRQLHKFGGSSLADVKCYLRVAGIMAEYSRPGDMMVVSAAGSTTNQLI CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH SWLKLSQSDRISAHQVQQALRRYQSELIVGLLPPEMAEPLQTHFIRDLERLAALLDGEMD HHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC EAAYAEVVGHGEVWSARLMAAVLQSQGLEATWLDARDFLCAEHAAQPQVDERRSYPLLQQ HHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCHHHCCCHHHHH LLAQHPNKRLVVTGFISRSGAGETVLLGRNGSDYSATQIGALAGVRRVTIWSDVAGVYSA HHHHCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCC DPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSASDIDLQLRCSYQPQQGSTRI CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHH ERVLASGNGAKIVTSHDDVCLIELHVTTGHEFSHIHQEVERILTRSQLRPLASGIHRDRG HHHHHCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LIQLCYTAEVVGSVFKLLEESAIPGLLQLREGLALVAMVGAGVCRNPLHAHRFYQQLKDQ CEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHCC PVEFIWQSEESISLVAVLRCGPTEALVQGLHNSLFRAEKRVGLVLFGKGNIGSRWLELFA CHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH REQGNLSASSGFEFILTGVVDSNRSLLNYDGLDASRALAFFDDEAQVLDEESLFLWMRAH HHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHCEEEEECCCHHHCCCCCEEEEEECC PYDDLVVLDVTASPSLAQQYRDFASYGFHMVSANKLAGAAGGHEYRQIRDAFEKTGRHWL CCCCEEEEEECCCCHHHHHHHHHHHCCEEEEECCHHCCCCCCHHHHHHHHHHHHCCCEEE YNATVGAGLPVNYTVRDLRDSGDTILSISGIFSGTLSWLFLQFDGSIPFSALVDQAWQQG EEECCCCCCCCCCCHHHHCCCCCCEEEEHHHHHHCEEEEEEEECCCCCHHHHHHHHHHCC LTEPDPRVDLSGQDVMRKLVILAREAGYDIEPAQVRVESLVPAGGEQGSIDHFFENSEAL CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCHHHH DEQMLQRLAAANEMGLVLRYVARFDANGKARVGVEAVRPEHPLASLLPCDNVFAIESRWY HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEECCEECCCCCCHHHHCCCCCEEEECCCEE RDNPLVIRGPGAGRDVTAGAIQSDLNRLARLL CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6298218; 8346018; 9278503 [H]