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The map label for this gene is yiiR [H]

Identifier: 238921632

GI number: 238921632

Start: 3668146

End: 3668577

Strand: Direct

Name: yiiR [H]

Synonym: NT01EI_3787

Alternate gene names: 238921632

Gene position: 3668146-3668577 (Clockwise)

Preceding gene: 238921629

Following gene: 238921635

Centisome position: 96.22

GC content: 62.27

Gene sequence:

>432_bases
ATGGGCCTACAACAGTGGTGTTTCTCTTTACGCGGCCGCCTGGGGCGTCAGGCGTTCTGGATTTGGATGGGCGTCTGGGC
GTTGCTGCTGTTGGCACTGTTCTCCCTGGCAGGTGCAGCGCTGATCCCGCTACAGGCCGCGGCGTTTCTATTGGTTCTCT
CGCTGTGGCCCACGGCCGCGGTATGGGTCAAACGCCTGCATGACCGTAATAAGTCGGGATGGTGGGCGCTGCTGGCAGTG
GTGGCGTGGATACTGGCCGCTGGGAACTGGGAAATCCTGGGTGCACTGTGGACATGGGCACTGGGGCGATTTCTGCCGCT
GCTGATCTACGTCATGCTGCTGCTGGACTGCGGTGTCTTCGTTGGTACTGCGGGCGATAACCGCTATGGACCGCCGCCGC
GGGCGCTGAACTGGCGCTGTATCGGAGAGTAG

Upstream 100 bases:

>100_bases
CCGGTTGTCAAAAAGGCGCGTAAAAATTCCGCGATACGGCGATGGGATCGGGTACACTGCGCCGCTCTGTTGACTGAACC
GAACGACAAAAGGATGAGTG

Downstream 100 bases:

>100_bases
GCCGGAGGGACGACGCCGGGAAGACCCGGCGTCAGACGTATTACCAGTAGTGTTCGCTGGTGATCTGGCCCGGTTTACGG
CGTAGGTGCTTACGCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGLQQWCFSLRGRLGRQAFWIWMGVWALLLLALFSLAGAALIPLQAAAFLLVLSLWPTAAVWVKRLHDRNKSGWWALLAV
VAWILAAGNWEILGALWTWALGRFLPLLIYVMLLLDCGVFVGTAGDNRYGPPPRALNWRCIGE

Sequences:

>Translated_143_residues
MGLQQWCFSLRGRLGRQAFWIWMGVWALLLLALFSLAGAALIPLQAAAFLLVLSLWPTAAVWVKRLHDRNKSGWWALLAV
VAWILAAGNWEILGALWTWALGRFLPLLIYVMLLLDCGVFVGTAGDNRYGPPPRALNWRCIGE
>Mature_142_residues
GLQQWCFSLRGRLGRQAFWIWMGVWALLLLALFSLAGAALIPLQAAAFLLVLSLWPTAAVWVKRLHDRNKSGWWALLAVV
AWILAAGNWEILGALWTWALGRFLPLLIYVMLLLDCGVFVGTAGDNRYGPPPRALNWRCIGE

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=143, Percent_Identity=56.6433566433566, Blast_Score=167, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 16030; Mature: 15899

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLQQWCFSLRGRLGRQAFWIWMGVWALLLLALFSLAGAALIPLQAAAFLLVLSLWPTAA
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWVKRLHDRNKSGWWALLAVVAWILAAGNWEILGALWTWALGRFLPLLIYVMLLLDCGVF
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTAGDNRYGPPPRALNWRCIGE
EECCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
GLQQWCFSLRGRLGRQAFWIWMGVWALLLLALFSLAGAALIPLQAAAFLLVLSLWPTAA
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWVKRLHDRNKSGWWALLAVVAWILAAGNWEILGALWTWALGRFLPLLIYVMLLLDCGVF
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTAGDNRYGPPPRALNWRCIGE
EECCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]