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The map label for this gene is idi [H]

Identifier: 238921620

GI number: 238921620

Start: 3659853

End: 3660371

Strand: Reverse

Name: idi [H]

Synonym: NT01EI_3775

Alternate gene names: 238921620

Gene position: 3660371-3659853 (Counterclockwise)

Preceding gene: 238921621

Following gene: 238921619

Centisome position: 96.01

GC content: 59.54

Gene sequence:

>519_bases
GTGATTGAGGTCGTTCTGGTCGATGAGCATGACGCCGTGCAGGGGCATATGGAGAAGCTGGCGGCGCACCGCCAGGGATG
TTTGCACCGCGCGCTGTCTGTCTATATTTTTAATGCGCGCGGCGAGCTGCTGCTTCAGCGTCGCGCCGCTGATAAGTACC
ATGCCGGTGGGCAGTGGAGCAATACCTGCTGTAGTCATCCGCTGCCGGGCGAGGCTGTCGAGCGGGCAGCAGCGCGCCGA
CTGCAGGAGGAGATGGGGATGCTGTGCGATCTGACTCCAGGGCTGACGCTGTGCTATCGGTTGGATGTTGGAGGGGGATT
GACGGAGCATGAATTTACCCACGTTTTTATCGGCCAGAGCGATCGGATGCCCCAGCTGAACCTGGCTGAGGCGGATGCCT
TTGTATTCCGTGAGCCGACGGCGATCTTACTGCATATGGCTCAGCAACCAGATTACTATACGCCGTGGTTCCGAGCGTGC
CTGACGCCGGTTTTGCAGCATATGGCGTATCCGTGCTGA

Upstream 100 bases:

>100_bases
GACGCGATCGGGTATGGTAACCCTGCCTGTCCAGATGGTGAGCGTTCAAACGGGCTTGGCGTGTCGTCCGGTTTCTAGGG
TATGTTTGGGAGAGAATGGG

Downstream 100 bases:

>100_bases
ACCTTGGCGGGGGGAACCAGTTCTGGTGTCTTTGTTCGCACTTTAAAAACTCACGCCGAGGCGAATAACATCATCCCCGG
CTGCTCATGAAGATGTGGCG

Product: isopentenyl-diphosphate delta-isomerase

Products: NA

Alternate protein names: IPP isomerase; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MIEVVLVDEHDAVQGHMEKLAAHRQGCLHRALSVYIFNARGELLLQRRAADKYHAGGQWSNTCCSHPLPGEAVERAAARR
LQEEMGMLCDLTPGLTLCYRLDVGGGLTEHEFTHVFIGQSDRMPQLNLAEADAFVFREPTAILLHMAQQPDYYTPWFRAC
LTPVLQHMAYPC

Sequences:

>Translated_172_residues
MIEVVLVDEHDAVQGHMEKLAAHRQGCLHRALSVYIFNARGELLLQRRAADKYHAGGQWSNTCCSHPLPGEAVERAAARR
LQEEMGMLCDLTPGLTLCYRLDVGGGLTEHEFTHVFIGQSDRMPQLNLAEADAFVFREPTAILLHMAQQPDYYTPWFRAC
LTPVLQHMAYPC
>Mature_172_residues
MIEVVLVDEHDAVQGHMEKLAAHRQGCLHRALSVYIFNARGELLLQRRAADKYHAGGQWSNTCCSHPLPGEAVERAAARR
LQEEMGMLCDLTPGLTLCYRLDVGGGLTEHEFTHVFIGQSDRMPQLNLAEADAFVFREPTAILLHMAQQPDYYTPWFRAC
LTPVLQHMAYPC

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI40018633, Length=177, Percent_Identity=32.7683615819209, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI15147242, Length=98, Percent_Identity=39.7959183673469, Blast_Score=68, Evalue=5e-12,
Organism=Escherichia coli, GI1789255, Length=159, Percent_Identity=32.7044025157233, Blast_Score=85, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17554092, Length=172, Percent_Identity=33.1395348837209, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6325140, Length=184, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281362205, Length=185, Percent_Identity=31.8918918918919, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24648688, Length=185, Percent_Identity=31.8918918918919, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011876
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 19376; Mature: 19376

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00142 ZINC_PROTEASE ; PS00879 ODR_DC_2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVVLVDEHDAVQGHMEKLAAHRQGCLHRALSVYIFNARGELLLQRRAADKYHAGGQWS
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCHHCCCCCCC
NTCCSHPLPGEAVERAAARRLQEEMGMLCDLTPGLTLCYRLDVGGGLTEHEFTHVFIGQS
CCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEECCCCCCCCCEEEEEECCC
DRMPQLNLAEADAFVFREPTAILLHMAQQPDYYTPWFRACLTPVLQHMAYPC
CCCCCCCHHHCCHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIEVVLVDEHDAVQGHMEKLAAHRQGCLHRALSVYIFNARGELLLQRRAADKYHAGGQWS
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCHHCCCCCCC
NTCCSHPLPGEAVERAAARRLQEEMGMLCDLTPGLTLCYRLDVGGGLTEHEFTHVFIGQS
CCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEECCCCCCCCCEEEEEECCC
DRMPQLNLAEADAFVFREPTAILLHMAQQPDYYTPWFRACLTPVLQHMAYPC
CCCCCCCHHHCCHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA