| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is yrbH [C]
Identifier: 238921583
GI number: 238921583
Start: 3622107
End: 3622388
Strand: Direct
Name: yrbH [C]
Synonym: NT01EI_3737
Alternate gene names: 238921583
Gene position: 3622107-3622388 (Clockwise)
Preceding gene: 238921582
Following gene: 238921587
Centisome position: 95.01
GC content: 69.15
Gene sequence:
>282_bases GTGAAGGGGGTTCCCCTGATCGCCGCAACGGAGAATCCGCGCTCGGCCATCGCCCGCGCGGCGCAGCTGACGCTGGCGAC CGGGGTACAGCACGAGATAGACCCGCTCAACATGCTGGCCACCACCGCCATCATCTTGGTGTTGGCCCTGTTCGATGCCG CCTGCGCCTGTCTGATGCAGCGCAGCGGCTACGCTCGCCAGACCCTGCCGAGCGTACATCCCGGCGGCGACGTCGGGCTA AGCCTGCTCCGCAGCGCGGACGATCAGGCCAGCGGCGCGTAG
Upstream 100 bases:
>100_bases GGAAGTATCGCAGCTGATGCAGGAGGCGAAATGACACCAGGCGCAGGCGGCCTGGCAAATCTATAGCGCCGAGCTGGCCC ACCGGCTGTCGGCGCTACAG
Downstream 100 bases:
>100_bases ATGTCGAAGCGGTGGCTTTTGGTCAGGGTCGCGTTAGGGGTTGCGACGCCAGCCAGCGGCGGCGCATAGTCTGGCCGCTT GACCACCACCCGCTTGGTTG
Product: sugar isomerase, KpsF/GutQ family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MKGVPLIAATENPRSAIARAAQLTLATGVQHEIDPLNMLATTAIILVLALFDAACACLMQRSGYARQTLPSVHPGGDVGL SLLRSADDQASGA
Sequences:
>Translated_93_residues MKGVPLIAATENPRSAIARAAQLTLATGVQHEIDPLNMLATTAIILVLALFDAACACLMQRSGYARQTLPSVHPGGDVGL SLLRSADDQASGA >Mature_93_residues MKGVPLIAATENPRSAIARAAQLTLATGVQHEIDPLNMLATTAIILVLALFDAACACLMQRSGYARQTLPSVHPGGDVGL SLLRSADDQASGA
Specific function: Unknown
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9569; Mature: 9569
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVPLIAATENPRSAIARAAQLTLATGVQHEIDPLNMLATTAIILVLALFDAACACLMQ CCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSGYARQTLPSVHPGGDVGLSLLRSADDQASGA HCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKGVPLIAATENPRSAIARAAQLTLATGVQHEIDPLNMLATTAIILVLALFDAACACLMQ CCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RSGYARQTLPSVHPGGDVGLSLLRSADDQASGA HCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA