| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921582
Identifier: 238921582
GI number: 238921582
Start: 3621715
End: 3622023
Strand: Direct
Name: 238921582
Synonym: NT01EI_3735
Alternate gene names: NA
Gene position: 3621715-3622023 (Clockwise)
Preceding gene: 238921579
Following gene: 238921583
Centisome position: 95.0
GC content: 57.93
Gene sequence:
>309_bases ATGGTCCCGGACACCCGCCATATCATCGAAACCATGAACCAGAGCAGCTACCGCATCGACACCATCACGGTCAGCGGCGG CGGGACCAAGAACCCAATCTTCGTTCAGGAGCACGCCAACACCACCGGCTGCGCCATGATGGGCACCGTTGCAGCCGTCA TCTTTAACACCCTGCCGGAGGCGATGGGTGCCATGAGCCGCATCGGCAAGACCGTAACGCCGCAGACCAACAGCATCAAG CGCTACTACGATCGCATATACCGGGTGTTCCATGAAATGTATCAGGACCATAGGAAGTATCGCAGCTGA
Upstream 100 bases:
>100_bases TTCAATCAAAGCAACGAAACACGCTCCATCTTGATGGAAGCGGGCGCTGAGCGGCCGGAGGCTGTTGTGCCCCCCAGAGG GTTTGGCGACCATCCAGTCG
Downstream 100 bases:
>100_bases TGCAGGAGGCGAAATGACACCAGGCGCAGGCGGCCTGGCAAATCTATAGCGCCGAGCTGGCCCACCGGCTGTCGGCGCTA CAGGTGAAGGGGGTTCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribulokinase; Sugar Kinase; Transcriptional Regulator; Ribitol Kinase
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MVPDTRHIIETMNQSSYRIDTITVSGGGTKNPIFVQEHANTTGCAMMGTVAAVIFNTLPEAMGAMSRIGKTVTPQTNSIK RYYDRIYRVFHEMYQDHRKYRS
Sequences:
>Translated_102_residues MVPDTRHIIETMNQSSYRIDTITVSGGGTKNPIFVQEHANTTGCAMMGTVAAVIFNTLPEAMGAMSRIGKTVTPQTNSIK RYYDRIYRVFHEMYQDHRKYRS >Mature_102_residues MVPDTRHIIETMNQSSYRIDTITVSGGGTKNPIFVQEHANTTGCAMMGTVAAVIFNTLPEAMGAMSRIGKTVTPQTNSIK RYYDRIYRVFHEMYQDHRKYRS
Specific function: Unknown
COG id: COG1069
COG function: function code C; Ribulose kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI164663830, Length=111, Percent_Identity=36.9369369369369, Blast_Score=79, Evalue=8e-16, Organism=Homo sapiens, GI164663828, Length=111, Percent_Identity=36.9369369369369, Blast_Score=79, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11606; Mature: 11606
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPDTRHIIETMNQSSYRIDTITVSGGGTKNPIFVQEHANTTGCAMMGTVAAVIFNTLPE CCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH AMGAMSRIGKTVTPQTNSIKRYYDRIYRVFHEMYQDHRKYRS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVPDTRHIIETMNQSSYRIDTITVSGGGTKNPIFVQEHANTTGCAMMGTVAAVIFNTLPE CCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH AMGAMSRIGKTVTPQTNSIKRYYDRIYRVFHEMYQDHRKYRS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA