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The map label for this gene is ulaD [H]

Identifier: 238921509

GI number: 238921509

Start: 3546643

End: 3547299

Strand: Direct

Name: ulaD [H]

Synonym: NT01EI_3661

Alternate gene names: 238921509

Gene position: 3546643-3547299 (Clockwise)

Preceding gene: 238921508

Following gene: 238921510

Centisome position: 93.03

GC content: 64.69

Gene sequence:

>657_bases
ATGATACCGTCCCTGCCTATGCTGCAAATCGCGCTGGATAACCCAACGCTGGAGGCGGCCTACCTCACCACCCGGCAGAT
CGTCGAAGCCGTCGATATCATCGAGGTCGGCACGATACTGTGCGTCGGCGAGGGCGTGCGCGCCATACGCGATCTCAAGG
CGCTCTATCCCCACAAGATCATCTTGGCCGACGCCAAAATTGCCGATGCCGGCGCCATCCTGGCGCGCATGTGTTTTGAG
GCCAACGCCGACTGGATCACCGTGATCTGCTGTGCCGATATCGCTACGGCCAAGAACGCGCTGGCGGTCGCGCAGGCGTT
CGACGGCGATCTGCAAATCGAGCTGACCGGCTACTGGACCTGGGAGCAGGCACAGGCCTGGCGCCAGGCGGGTATCGGTC
AGGTGGTCTACCACCGCAGCCGCGACGCACAGGCGGCGGGGGTGGCCTGGGGACAGGCGGATATCGACGCCATACGCCGC
CTGAGCGACATGGGCTTTCGCGTCACGGTGACCGGTGGCCTCACCCTGGACGATCTTCCGCTGTTTCAGGGGATCCCGGT
GCATGTTTTCATCGCCGGACGCAGCATCCGCGAGGCCGACGATCCGCTGGCCGCCGCGCATCGCTTCAAACAGCGCATCG
CCCAGCTGTGGGGCTAA

Upstream 100 bases:

>100_bases
AGGCCAACTTTACGCGCCTGCGCGCCTGCCGCGCGCCTGCGCAGGTGCTGGCGCTCATCGATTCGGCAACCACCCCATCG
CATCCCCAGGGAGTCTCCTC

Downstream 100 bases:

>100_bases
GGAGACCAATATGCTGCATCCTACCGTGCCGCTGGGCATCTATGAAAAGGCGCTGCCGGCCGACGAGGAGTGGCCACAGC
GCCTGACACAGGCCGCACAG

Product: 3-keto-L-gulonate-6-phosphate decarboxylase

Products: NA

Alternate protein names: 3-dehydro-L-gulonate-6-phosphate decarboxylase; KGPDC; L-ascorbate utilization protein D [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIPSLPMLQIALDNPTLEAAYLTTRQIVEAVDIIEVGTILCVGEGVRAIRDLKALYPHKIILADAKIADAGAILARMCFE
ANADWITVICCADIATAKNALAVAQAFDGDLQIELTGYWTWEQAQAWRQAGIGQVVYHRSRDAQAAGVAWGQADIDAIRR
LSDMGFRVTVTGGLTLDDLPLFQGIPVHVFIAGRSIREADDPLAAAHRFKQRIAQLWG

Sequences:

>Translated_218_residues
MIPSLPMLQIALDNPTLEAAYLTTRQIVEAVDIIEVGTILCVGEGVRAIRDLKALYPHKIILADAKIADAGAILARMCFE
ANADWITVICCADIATAKNALAVAQAFDGDLQIELTGYWTWEQAQAWRQAGIGQVVYHRSRDAQAAGVAWGQADIDAIRR
LSDMGFRVTVTGGLTLDDLPLFQGIPVHVFIAGRSIREADDPLAAAHRFKQRIAQLWG
>Mature_218_residues
MIPSLPMLQIALDNPTLEAAYLTTRQIVEAVDIIEVGTILCVGEGVRAIRDLKALYPHKIILADAKIADAGAILARMCFE
ANADWITVICCADIATAKNALAVAQAFDGDLQIELTGYWTWEQAQAWRQAGIGQVVYHRSRDAQAAGVAWGQADIDAIRR
LSDMGFRVTVTGGLTLDDLPLFQGIPVHVFIAGRSIREADDPLAAAHRFKQRIAQLWG

Specific function: Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG0269

COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HPS/KGPDC family. KGPDC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790640, Length=215, Percent_Identity=80.9302325581395, Blast_Score=366, Evalue=1e-103,
Organism=Escherichia coli, GI1790006, Length=215, Percent_Identity=47.4418604651163, Blast_Score=204, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.85 [H]

Molecular weight: Translated: 23735; Mature: 23735

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSLPMLQIALDNPTLEAAYLTTRQIVEAVDIIEVGTILCVGEGVRAIRDLKALYPHKI
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCEE
ILADAKIADAGAILARMCFEANADWITVICCADIATAKNALAVAQAFDGDLQIELTGYWT
EEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEE
WEQAQAWRQAGIGQVVYHRSRDAQAAGVAWGQADIDAIRRLSDMGFRVTVTGGLTLDDLP
HHHHHHHHHCCCCCEEEECCCCCCHHCEECCHHHHHHHHHHHHCCEEEEEECCCEECCCC
LFQGIPVHVFIAGRSIREADDPLAAAHRFKQRIAQLWG
HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPSLPMLQIALDNPTLEAAYLTTRQIVEAVDIIEVGTILCVGEGVRAIRDLKALYPHKI
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHCCCEE
ILADAKIADAGAILARMCFEANADWITVICCADIATAKNALAVAQAFDGDLQIELTGYWT
EEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEE
WEQAQAWRQAGIGQVVYHRSRDAQAAGVAWGQADIDAIRRLSDMGFRVTVTGGLTLDDLP
HHHHHHHHHCCCCCEEEECCCCCCHHCEECCHHHHHHHHHHHHCCEEEEEECCCEECCCC
LFQGIPVHVFIAGRSIREADDPLAAAHRFKQRIAQLWG
HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA