| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ulaC [H]
Identifier: 238921508
GI number: 238921508
Start: 3546161
End: 3546646
Strand: Direct
Name: ulaC [H]
Synonym: NT01EI_3660
Alternate gene names: 238921508
Gene position: 3546161-3546646 (Clockwise)
Preceding gene: 238921507
Following gene: 238921509
Centisome position: 93.02
GC content: 65.84
Gene sequence:
>486_bases ATGAAACTGCGAGACTCTCTGGCGGAAAACCACAGCATCCGCCTACAGGCCGAGGCGGCGGACTGGCCTGCGGCCGTCAG GATCGGCGTGGATCTCCTGGTCAGCGCCGGCGTCGTAGAGCCACGCTACTACCGGGCCATCCTGGATAGCGTCGCGCGCT TTGGCCCCTACTTTGTGCTGGCTCCGGGGCTGGCCATGCCGCACGGGCGCCCGGAAGAGGGGGTGATCAAGACCGGCTTT GCACTGGTCACCCTGCGTACGCCGGTCGCGTTCGGCCATGAGGATAACGACCCGGTGGACATTCTGATCACCCTGGCCGC CGTCGACGCCCACACCCATCAGGAGGTCGGTATCCGTCAGATCGTCGACCTGTTCGAGGATGAGGCCAACTTTACGCGCC TGCGCGCCTGCCGCGCGCCTGCGCAGGTGCTGGCGCTCATCGATTCGGCAACCACCCCATCGCATCCCCAGGGAGTCTCC TCATGA
Upstream 100 bases:
>100_bases GGTCGGGGTGCGCAATATGCTGTCGGCAGACGAGTTCGGCCCCAGGCTGCTGGAGGTCATCCGCGCCCATTTCCCCCAGG ACCTCAGCTAAGGAGCCATG
Downstream 100 bases:
>100_bases TACCGTCCCTGCCTATGCTGCAAATCGCGCTGGATAACCCAACGCTGGAGGCGGCCTACCTCACCACCCGGCAGATCGTC GAAGCCGTCGATATCATCGA
Product: PTS system L-ascorbate-specific transporter subunit IIA
Products: protein histidine; sugar phosphate
Alternate protein names: PTS system ascorbate-specific EIIA component [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKLRDSLAENHSIRLQAEAADWPAAVRIGVDLLVSAGVVEPRYYRAILDSVARFGPYFVLAPGLAMPHGRPEEGVIKTGF ALVTLRTPVAFGHEDNDPVDILITLAAVDAHTHQEVGIRQIVDLFEDEANFTRLRACRAPAQVLALIDSATTPSHPQGVS S
Sequences:
>Translated_161_residues MKLRDSLAENHSIRLQAEAADWPAAVRIGVDLLVSAGVVEPRYYRAILDSVARFGPYFVLAPGLAMPHGRPEEGVIKTGF ALVTLRTPVAFGHEDNDPVDILITLAAVDAHTHQEVGIRQIVDLFEDEANFTRLRACRAPAQVLALIDSATTPSHPQGVS S >Mature_161_residues MKLRDSLAENHSIRLQAEAADWPAAVRIGVDLLVSAGVVEPRYYRAILDSVARFGPYFVLAPGLAMPHGRPEEGVIKTGF ALVTLRTPVAFGHEDNDPVDILITLAAVDAHTHQEVGIRQIVDLFEDEANFTRLRACRAPAQVLALIDSATTPSHPQGVS S
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI2367359, Length=148, Percent_Identity=78.3783783783784, Blast_Score=244, Evalue=2e-66, Organism=Escherichia coli, GI1790755, Length=101, Percent_Identity=43.5643564356436, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI1789302, Length=113, Percent_Identity=41.5929203539823, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 [H]
Pfam domain/function: PF00359 PTS_EIIA_2 [H]
EC number: 2.7.1.69
Molecular weight: Translated: 17430; Mature: 17430
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRDSLAENHSIRLQAEAADWPAAVRIGVDLLVSAGVVEPRYYRAILDSVARFGPYFVL CCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEE APGLAMPHGRPEEGVIKTGFALVTLRTPVAFGHEDNDPVDILITLAAVDAHTHQEVGIRQ CCCCCCCCCCCCCCEEECCEEEEEEECCEEECCCCCCCEEEEEEEEHHCCCCCHHHHHHH IVDLFEDEANFTRLRACRAPAQVLALIDSATTPSHPQGVSS HHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLRDSLAENHSIRLQAEAADWPAAVRIGVDLLVSAGVVEPRYYRAILDSVARFGPYFVL CCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEE APGLAMPHGRPEEGVIKTGFALVTLRTPVAFGHEDNDPVDILITLAAVDAHTHQEVGIRQ CCCCCCCCCCCCCCEEECCEEEEEEECCEEECCCCCCCEEEEEEEEHHCCCCCHHHHHHH IVDLFEDEANFTRLRACRAPAQVLALIDSATTPSHPQGVSS HHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]