| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is feoC [H]
Identifier: 238921499
GI number: 238921499
Start: 3538940
End: 3539191
Strand: Direct
Name: feoC [H]
Synonym: NT01EI_3651
Alternate gene names: 238921499
Gene position: 3538940-3539191 (Clockwise)
Preceding gene: 238921498
Following gene: 238921501
Centisome position: 92.83
GC content: 58.73
Gene sequence:
>252_bases ATGATGACCACCTTACTGCAAGTCCGGGATACCGTCGCGCTACATGGGCGTATTGAGCTACAGCGCCTGTGTCGTGAGGT CGGCGGCACGCCGGCACTGGTGCGCGCCATGCTGGAGCGTCTGGAGCTCATGGGATGTGTGGAAAAGGTCGATGATATGG ATAGCGGATGCCTGAGCGGCAGCTGTAAAGGCTGCCCCGAGGCGCAGAAAAAATGTGAAACCGTCGTCTACCGGATACGC ACGCTGCACTAA
Upstream 100 bases:
>100_bases CTCTCGCGAGCGGGTTACCGTGCGCCTGAGCAACGCCACCAGCGCCAGCTGCTGCTGCAACAATAGCGGCAGCTGCCACT GATCACTCTAACGGAGCGCC
Downstream 100 bases:
>100_bases ACGCGCGCCGTAACCATTGACGCCCCTCGACAGGCAGCCGCAGATGCGGCTGCTTTTTTTATCGCTGCCCATTATACCGA CCGCCCGTCGGCAAACTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MMTTLLQVRDTVALHGRIELQRLCREVGGTPALVRAMLERLELMGCVEKVDDMDSGCLSGSCKGCPEAQKKCETVVYRIR TLH
Sequences:
>Translated_83_residues MMTTLLQVRDTVALHGRIELQRLCREVGGTPALVRAMLERLELMGCVEKVDDMDSGCLSGSCKGCPEAQKKCETVVYRIR TLH >Mature_83_residues MMTTLLQVRDTVALHGRIELQRLCREVGGTPALVRAMLERLELMGCVEKVDDMDSGCLSGSCKGCPEAQKKCETVVYRIR TLH
Specific function: May function as a transcriptional regulator that controls feoABC expression [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoC family [H]
Homologues:
Organism=Escherichia coli, GI1789814, Length=79, Percent_Identity=40.5063291139241, Blast_Score=65, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015102 [H]
Pfam domain/function: PF09012 FeoC [H]
EC number: NA
Molecular weight: Translated: 9251; Mature: 9251
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.2 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 13.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTLLQVRDTVALHGRIELQRLCREVGGTPALVRAMLERLELMGCVEKVDDMDSGCLSG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SCKGCPEAQKKCETVVYRIRTLH CCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMTTLLQVRDTVALHGRIELQRLCREVGGTPALVRAMLERLELMGCVEKVDDMDSGCLSG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SCKGCPEAQKKCETVVYRIRTLH CCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA