| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is gntX [H]
Identifier: 238921501
GI number: 238921501
Start: 3540084
End: 3540764
Strand: Direct
Name: gntX [H]
Synonym: NT01EI_3653
Alternate gene names: 238921501
Gene position: 3540084-3540764 (Clockwise)
Preceding gene: 238921499
Following gene: 238921502
Centisome position: 92.86
GC content: 70.78
Gene sequence:
>681_bases ATGGTATCACTTCACGGACGCTGCGCGATCTGCCTCCTTCCCCTACGGGCGCCAGTCGGTATCTGTAGCGCCTGCCGTCG GGCGCTGCCCGCGCCGCCGCCCTGCTGTCCCCGCTGTGGGCTGCCCAGCGCAGATATCCATCACCCCTGCGGCCGCTGCC TGCTGCGCCCACCGCCCTGGCAGCGGCTGACGTTTGTCAGCGGCTATCTACCGCCGCTGGCGCCGTTGGTACAGCGCTTG AAATACCGCGCGGAGTGGCCGCTGGCCGTGCCGTTGGCCCGGCTGATGCTGCTGCGCTACCTGCAGGATCGCCGCAGCGC GCCGCGGGCGCGCCCCGAGATCATCCTGCCGGTGCCGCTACACCGTCTGCGCCACTGGCAGCGCGGCTACAATCAGGCCG CCGAACTGGCCCGCTGGCTGGCGCGCTGGCTGCAGGCCGAGTTCCGCCCGCAGTGGCTCTGGCGCACTCGGCGAACCCCG CCCCAGCAAGGGCTCAGCGCGGCGCAGCGGCGGCGCAACCTGCGCGGTGCTTTCGCCGCGCACCGGGCGCTGGCCGGGCG GCGGGTGCTGCTGGTCGACGATGTGATCACCACCGGCAGTACCCTGAGCGAAATCTCCCGCCTGCTGATAGCACAGGGTG TGATGTCGGTAGAGACGATCTGTCTGTGCCGCACCTTGTGA
Upstream 100 bases:
>100_bases AGCAGCACAAGATCGCGTTTACCCGCGCCGCAGGTATGCCAAAACAGCGCACTCATCGGTTATGGTCTCCTTTTCCCTTA GACCTTTCAGGACGAAGCCT
Downstream 100 bases:
>100_bases GCATTTTACGATCGGCGTATTATAACCGACCGGAGTAGTCAACTATTGAGCAGATGCCATGATCCGTATTACCGAAGCAG CGCAAGAGCACTTTGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVSLHGRCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPWQRLTFVSGYLPPLAPLVQRL KYRAEWPLAVPLARLMLLRYLQDRRSAPRARPEIILPVPLHRLRHWQRGYNQAAELARWLARWLQAEFRPQWLWRTRRTP PQQGLSAAQRRRNLRGAFAAHRALAGRRVLLVDDVITTGSTLSEISRLLIAQGVMSVETICLCRTL
Sequences:
>Translated_226_residues MVSLHGRCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPWQRLTFVSGYLPPLAPLVQRL KYRAEWPLAVPLARLMLLRYLQDRRSAPRARPEIILPVPLHRLRHWQRGYNQAAELARWLARWLQAEFRPQWLWRTRRTP PQQGLSAAQRRRNLRGAFAAHRALAGRRVLLVDDVITTGSTLSEISRLLIAQGVMSVETICLCRTL >Mature_226_residues MVSLHGRCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPWQRLTFVSGYLPPLAPLVQRL KYRAEWPLAVPLARLMLLRYLQDRRSAPRARPEIILPVPLHRLRHWQRGYNQAAELARWLARWLQAEFRPQWLWRTRRTP PQQGLSAAQRRRNLRGAFAAHRALAGRRVLLVDDVITTGSTLSEISRLLIAQGVMSVETICLCRTL
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=227, Percent_Identity=46.2555066079295, Blast_Score=182, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 25676; Mature: 25676
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLHGRCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPW CCCCCCCCEEEEECHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC QRLTFVSGYLPPLAPLVQRLKYRAEWPLAVPLARLMLLRYLQDRRSAPRARPEIILPVPL HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCH HRLRHWQRGYNQAAELARWLARWLQAEFRPQWLWRTRRTPPQQGLSAAQRRRNLRGAFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH HRALAGRRVLLVDDVITTGSTLSEISRLLIAQGVMSVETICLCRTL HHHHHCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSLHGRCAICLLPLRAPVGICSACRRALPAPPPCCPRCGLPSADIHHPCGRCLLRPPPW CCCCCCCCEEEEECHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC QRLTFVSGYLPPLAPLVQRLKYRAEWPLAVPLARLMLLRYLQDRRSAPRARPEIILPVPL HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCH HRLRHWQRGYNQAAELARWLARWLQAEFRPQWLWRTRRTPPQQGLSAAQRRRNLRGAFAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH HRALAGRRVLLVDDVITTGSTLSEISRLLIAQGVMSVETICLCRTL HHHHHCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]