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The map label for this gene is hslR [H]

Identifier: 238921484

GI number: 238921484

Start: 3522750

End: 3523160

Strand: Direct

Name: hslR [H]

Synonym: NT01EI_3636

Alternate gene names: 238921484

Gene position: 3522750-3523160 (Clockwise)

Preceding gene: 238921483

Following gene: 238921485

Centisome position: 92.4

GC content: 59.12

Gene sequence:

>411_bases
ATGAAAGCCAGCGCCAGGCAAGAACAGGAGAGCATACGTCTGGATAAATGGCTGTGGGCGGCCCGTTTTTATAAAACCCG
CGCCGTTGCCCGCGATATGATCGACGGCGGAAAAGTACACTACAACGGGGTGCGCGGCAAGCCGAGCCGCAGCGTAGAAA
TCGGCGCCGAGATCCGCCTGCGTCAGGGCAACGATGATCGTACGGTCATTGTGACTGCCCTCAGCACCCAGCGCGGCGGC
GCTGAGCAGGCACGCCAGCTATATCAGGAGACCGCGCAGAGCATTGCCAAGCGCGAGGCGATTGCCCAGGCCCGCAAGAT
GAATGCGCTGAGCATGCCACACCCGGATCGGCGTCCCGATAAAAAAGAGCGCCGCAATCTGCTTAAATTTAAATACGACC
AGTCGGAATGA

Upstream 100 bases:

>100_bases
GACCAGAAAAACGCTTTTCCCGCCATCCGGCGATGAGTGACTACCGAGCCCTGCTGCCGGCCATCACCACCGGTGGGTCC
AATACCGGCAGGAGGCCACA

Downstream 100 bases:

>100_bases
CCGGCGCCTGAAGAGAGAGAACTATGCCCCATCACGACCAATTACATCGCTACCTGTTTGACAATCTGGCCGTACGCGGC
GAGCTGGTCAACGCCAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKASARQEQESIRLDKWLWAARFYKTRAVARDMIDGGKVHYNGVRGKPSRSVEIGAEIRLRQGNDDRTVIVTALSTQRGG
AEQARQLYQETAQSIAKREAIAQARKMNALSMPHPDRRPDKKERRNLLKFKYDQSE

Sequences:

>Translated_136_residues
MKASARQEQESIRLDKWLWAARFYKTRAVARDMIDGGKVHYNGVRGKPSRSVEIGAEIRLRQGNDDRTVIVTALSTQRGG
AEQARQLYQETAQSIAKREAIAQARKMNALSMPHPDRRPDKKERRNLLKFKYDQSE
>Mature_136_residues
MKASARQEQESIRLDKWLWAARFYKTRAVARDMIDGGKVHYNGVRGKPSRSVEIGAEIRLRQGNDDRTVIVTALSTQRGG
AEQARQLYQETAQSIAKREAIAQARKMNALSMPHPDRRPDKKERRNLLKFKYDQSE

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=125, Percent_Identity=69.6, Blast_Score=189, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 15655; Mature: 15655

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASARQEQESIRLDKWLWAARFYKTRAVARDMIDGGKVHYNGVRGKPSRSVEIGAEIRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCEEEE
RQGNDDRTVIVTALSTQRGGAEQARQLYQETAQSIAKREAIAQARKMNALSMPHPDRRPD
ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KKERRNLLKFKYDQSE
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKASARQEQESIRLDKWLWAARFYKTRAVARDMIDGGKVHYNGVRGKPSRSVEIGAEIRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEECCEEEE
RQGNDDRTVIVTALSTQRGGAEQARQLYQETAQSIAKREAIAQARKMNALSMPHPDRRPD
ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KKERRNLLKFKYDQSE
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]