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The map label for this gene is yrfG [H]

Identifier: 238921483

GI number: 238921483

Start: 3522052

End: 3522753

Strand: Direct

Name: yrfG [H]

Synonym: NT01EI_3635

Alternate gene names: 238921483

Gene position: 3522052-3522753 (Clockwise)

Preceding gene: 238921482

Following gene: 238921484

Centisome position: 92.39

GC content: 59.26

Gene sequence:

>702_bases
ATGGTTCCCATCCTCGACTGGAATGATATCGACACCGTCCTGCTGGATATGGACGGCACGCTGATCGATCTGGCCTTTGA
CAACTACTTTTGGCTAACGCTGGTGCCACAGACCTTAAGCGAGACGCGCGGTATTTCCAGCGCCGATGCTCAGGCGCTGA
TCCAGCGGGAGTACCAGGCGGTAGCCCATACGCTAAACTGGTACTGTTTCGACTACTGGCGCGAGCGCCTGGGGCTGGAC
ATTCACCGCATGACCTTGGAGCAAGGGGCCCGGGTGCAGGTGCGTCAGGATACGTTACCCTTTCTGGATGCCCTGCGCAC
CAGCGGGCGCCGTACCATTCTGCTGACCAACGCCCACCCGCACGGGCTGGCGATGAAGATGGCACAGACCGGGCTGGATA
GCCACCTTGATTTACTCTACTCCACCCACATATTTGGCTATCCCAAAGAGGATCAACGCCTGTGGCAAGCGGTACAGCAT
CAGTGTGGGCTGGATCCGGCCAGAACGCTGTTTATTGACGATGCCGAACCAATCCTCGATGCCGCGCACCAGTTCGGTAT
CCGTTACTGCCTGGGCGTCAGCAATCCCGACTCCGGCAGACCAGAAAAACGCTTTTCCCGCCATCCGGCGATGAGTGACT
ACCGAGCCCTGCTGCCGGCCATCACCACCGGTGGGTCCAATACCGGCAGGAGGCCACAATGA

Upstream 100 bases:

>100_bases
TCTTCCACCGCGCCCTTAACGTGCGGCATGACAAGGCGACGTCAGGAAAATATACTGGGCGACGCGATCACGCCCTGCAT
GCATTTTCCGGAGTACGCCC

Downstream 100 bases:

>100_bases
AAGCCAGCGCCAGGCAAGAACAGGAGAGCATACGTCTGGATAAATGGCTGTGGGCGGCCCGTTTTTATAAAACCCGCGCC
GTTGCCCGCGATATGATCGA

Product: HAD-superfamily hydrolase, subfamily IA, variant 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MVPILDWNDIDTVLLDMDGTLIDLAFDNYFWLTLVPQTLSETRGISSADAQALIQREYQAVAHTLNWYCFDYWRERLGLD
IHRMTLEQGARVQVRQDTLPFLDALRTSGRRTILLTNAHPHGLAMKMAQTGLDSHLDLLYSTHIFGYPKEDQRLWQAVQH
QCGLDPARTLFIDDAEPILDAAHQFGIRYCLGVSNPDSGRPEKRFSRHPAMSDYRALLPAITTGGSNTGRRPQ

Sequences:

>Translated_233_residues
MVPILDWNDIDTVLLDMDGTLIDLAFDNYFWLTLVPQTLSETRGISSADAQALIQREYQAVAHTLNWYCFDYWRERLGLD
IHRMTLEQGARVQVRQDTLPFLDALRTSGRRTILLTNAHPHGLAMKMAQTGLDSHLDLLYSTHIFGYPKEDQRLWQAVQH
QCGLDPARTLFIDDAEPILDAAHQFGIRYCLGVSNPDSGRPEKRFSRHPAMSDYRALLPAITTGGSNTGRRPQ
>Mature_233_residues
MVPILDWNDIDTVLLDMDGTLIDLAFDNYFWLTLVPQTLSETRGISSADAQALIQREYQAVAHTLNWYCFDYWRERLGLD
IHRMTLEQGARVQVRQDTLPFLDALRTSGRRTILLTNAHPHGLAMKMAQTGLDSHLDLLYSTHIFGYPKEDQRLWQAVQH
QCGLDPARTLFIDDAEPILDAAHQFGIRYCLGVSNPDSGRPEKRFSRHPAMSDYRALLPAITTGGSNTGRRPQ

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=215, Percent_Identity=64.1860465116279, Blast_Score=303, Evalue=8e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26508; Mature: 26508

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPILDWNDIDTVLLDMDGTLIDLAFDNYFWLTLVPQTLSETRGISSADAQALIQREYQA
CCCCCCCCCCCEEEEECCCCEEEEEECCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHH
VAHTLNWYCFDYWRERLGLDIHRMTLEQGARVQVRQDTLPFLDALRTSGRRTILLTNAHP
HHHHHHHHHHHHHHHHHCCCCEEHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCCC
HGLAMKMAQTGLDSHLDLLYSTHIFGYPKEDQRLWQAVQHQCGLDPARTLFIDDAEPILD
CHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCHHHHH
AAHQFGIRYCLGVSNPDSGRPEKRFSRHPAMSDYRALLPAITTGGSNTGRRPQ
HHHHCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVPILDWNDIDTVLLDMDGTLIDLAFDNYFWLTLVPQTLSETRGISSADAQALIQREYQA
CCCCCCCCCCCEEEEECCCCEEEEEECCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHH
VAHTLNWYCFDYWRERLGLDIHRMTLEQGARVQVRQDTLPFLDALRTSGRRTILLTNAHP
HHHHHHHHHHHHHHHHHCCCCEEHHHHCCCEEEEECCCHHHHHHHHCCCCEEEEEECCCC
HGLAMKMAQTGLDSHLDLLYSTHIFGYPKEDQRLWQAVQHQCGLDPARTLFIDDAEPILD
CHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCHHHHH
AAHQFGIRYCLGVSNPDSGRPEKRFSRHPAMSDYRALLPAITTGGSNTGRRPQ
HHHHCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]