Click here to switch to the map view.

The map label for this gene is yqeB [H]

Identifier: 238921384

GI number: 238921384

Start: 3425626

End: 3427164

Strand: Direct

Name: yqeB [H]

Synonym: NT01EI_3528

Alternate gene names: 238921384

Gene position: 3425626-3427164 (Clockwise)

Preceding gene: 238921383

Following gene: 238921390

Centisome position: 89.86

GC content: 62.77

Gene sequence:

>1539_bases
ATGGCTCAAATCATCGAGAGCCGTGGCTCCACACCGCGTCATTCGGCGCAGATGCTGGTAATGAAAGACGGCGGCATCAT
CGGCACCATCGGCGGAGGCATGATCGAACGGCTGGTTATTGAGCAGGCCATGCTGGCGTTGGCCGAGCGTAAGCCGCGTG
TATTCCACGGCCGTATGGCGCGCAGCGGCCAAGACGCCGTCGGCTCCGACTGCGGTGGCGCTATGTCAGTCTATATCGAC
GTACATGGCCTGCGCCCACGCCTGGTATTGATCGGCGCCGGGCACGTCAACCGGGCCATCGCCCACGCCGCGGCCTCGCT
GGGCTTCGACATCCACGTCGCCGATGCCTATCAGGATAGCCTAGATCCTGCGCTGTTTCCCCCCGGCACCCGTCTGCACC
ACGGAGACACGTTTACCCAGCTGATTAACGCGATGCAGATCGAGGAGGAGAGCTTTGTCATCATCGCGACCAACAGTCAG
GACAAAGAGGCGCTCGACTGCCTGATCGGGAAGCCCTTGTACTATCTTGGCCTGCTGGGAAGCCGCCGCAAGGTACAGAC
CTTCTGTCAGCAGCTGCGCCAGAGCGGCACAGACGAAGCTCAGCTGGCGCGTCTGCATGCCCCCATCGGCTATAACATCG
GCGCCGAAACGCCGGAGGAGATCGCCATCAGTATTCTGGCCGAGGTGCTGCAGATCAAAAACCGCGCCGCCGGCGGCCTG
ATGAAACAGAATATCCGTCTGCAGCGCAACCGTCTGGTGGCGATCCGCGGCGCCGGTGATATTGCCACCGGCGTGGCGCT
GAGGCTGTACCATGCCGGGTTTCAGGTGCTGATGCTGGAGGTCGCCAAGCCGACAGTGATCCGCCGTAGCGTCGCCTTTG
CCCAGGCCATCTTCGATGGGGAGAGCACGGTCGAGGGCGTCACCGCCCGCCGCGCCGATGGTACTGAGCAAGCCTTCAGC
CTGATTGAGCAGGGGATCATCCCGGTGCTGGTCGATCCGCAGTGCCTCACGCTGGCGGCGCTGCAGCCACACTATCTGGT
CGATGCCATTCTGGCCAAGCAGAATCTGGGAACCTGCCGCGATATGGCTCCGGTGACCGTCGCCCTCGGCCCCGGCTTCG
AGGCAGGACAGGACTGCGATGCGGTGATCGAAACCAACCGCGGGCATCACCTTGGACGGGTGATCTACCGAGGCTTTGCC
CAGGCCAATACCGGGATCCCGGGCAACATCAACGGTCACACCACCCGTCGGGTGATACGCGCCCCGCACACCGGTATCAT
GCACTGCTGCGTTAAGCTGGGCGATCTGGTCAACGAGGGCGATATCATCGCCCATATCGATACGACCCCGGTGCTCTCCC
CGCTGCAGGGTATGGTACGCGGCTTGCTGAGCGAAGGGCTGGAGGTCAGCGCCGGATTTAAAATCGGTGATGTCGATCCG
CGCGGCGCACAGGCCGATTTTACGACCGTCTCTGACAAAGCGCGTGCCATCGGCGGCGCCGTATTGGAAGCCATGATGAA
GCTAAACCCGCAGCCCTGA

Upstream 100 bases:

>100_bases
CCGCCGCGCCGGGAATAACAACAAGGCAGTCGACATTGAGGTCGTTATGAATATCTTTGCACAAGCTGCGCAACTCGAGG
AACAAAACCGCCCATTCGCC

Downstream 100 bases:

>100_bases
TGCAGTCCGGGCACCAGGACATTAAAAAGGGGCGCCCGGCGCCCCTTTCTGTTTTCCCTGCGATTACTGGCAAACGACGG
TACCGGTTTTCCCCTCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MAQIIESRGSTPRHSAQMLVMKDGGIIGTIGGGMIERLVIEQAMLALAERKPRVFHGRMARSGQDAVGSDCGGAMSVYID
VHGLRPRLVLIGAGHVNRAIAHAAASLGFDIHVADAYQDSLDPALFPPGTRLHHGDTFTQLINAMQIEEESFVIIATNSQ
DKEALDCLIGKPLYYLGLLGSRRKVQTFCQQLRQSGTDEAQLARLHAPIGYNIGAETPEEIAISILAEVLQIKNRAAGGL
MKQNIRLQRNRLVAIRGAGDIATGVALRLYHAGFQVLMLEVAKPTVIRRSVAFAQAIFDGESTVEGVTARRADGTEQAFS
LIEQGIIPVLVDPQCLTLAALQPHYLVDAILAKQNLGTCRDMAPVTVALGPGFEAGQDCDAVIETNRGHHLGRVIYRGFA
QANTGIPGNINGHTTRRVIRAPHTGIMHCCVKLGDLVNEGDIIAHIDTTPVLSPLQGMVRGLLSEGLEVSAGFKIGDVDP
RGAQADFTTVSDKARAIGGAVLEAMMKLNPQP

Sequences:

>Translated_512_residues
MAQIIESRGSTPRHSAQMLVMKDGGIIGTIGGGMIERLVIEQAMLALAERKPRVFHGRMARSGQDAVGSDCGGAMSVYID
VHGLRPRLVLIGAGHVNRAIAHAAASLGFDIHVADAYQDSLDPALFPPGTRLHHGDTFTQLINAMQIEEESFVIIATNSQ
DKEALDCLIGKPLYYLGLLGSRRKVQTFCQQLRQSGTDEAQLARLHAPIGYNIGAETPEEIAISILAEVLQIKNRAAGGL
MKQNIRLQRNRLVAIRGAGDIATGVALRLYHAGFQVLMLEVAKPTVIRRSVAFAQAIFDGESTVEGVTARRADGTEQAFS
LIEQGIIPVLVDPQCLTLAALQPHYLVDAILAKQNLGTCRDMAPVTVALGPGFEAGQDCDAVIETNRGHHLGRVIYRGFA
QANTGIPGNINGHTTRRVIRAPHTGIMHCCVKLGDLVNEGDIIAHIDTTPVLSPLQGMVRGLLSEGLEVSAGFKIGDVDP
RGAQADFTTVSDKARAIGGAVLEAMMKLNPQP
>Mature_511_residues
AQIIESRGSTPRHSAQMLVMKDGGIIGTIGGGMIERLVIEQAMLALAERKPRVFHGRMARSGQDAVGSDCGGAMSVYIDV
HGLRPRLVLIGAGHVNRAIAHAAASLGFDIHVADAYQDSLDPALFPPGTRLHHGDTFTQLINAMQIEEESFVIIATNSQD
KEALDCLIGKPLYYLGLLGSRRKVQTFCQQLRQSGTDEAQLARLHAPIGYNIGAETPEEIAISILAEVLQIKNRAAGGLM
KQNIRLQRNRLVAIRGAGDIATGVALRLYHAGFQVLMLEVAKPTVIRRSVAFAQAIFDGESTVEGVTARRADGTEQAFSL
IEQGIIPVLVDPQCLTLAALQPHYLVDAILAKQNLGTCRDMAPVTVALGPGFEAGQDCDAVIETNRGHHLGRVIYRGFAQ
ANTGIPGNINGHTTRRVIRAPHTGIMHCCVKLGDLVNEGDIIAHIDTTPVLSPLQGMVRGLLSEGLEVSAGFKIGDVDPR
GAQADFTTVSDKARAIGGAVLEAMMKLNPQP

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=511, Percent_Identity=69.6673189823875, Blast_Score=720, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 54738; Mature: 54607

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIIESRGSTPRHSAQMLVMKDGGIIGTIGGGMIERLVIEQAMLALAERKPRVFHGRMA
CCCCHHHCCCCCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHCCHHH
RSGQDAVGSDCGGAMSVYIDVHGLRPRLVLIGAGHVNRAIAHAAASLGFDIHVADAYQDS
CCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECHHHHC
LDPALFPPGTRLHHGDTFTQLINAMQIEEESFVIIATNSQDKEALDCLIGKPLYYLGLLG
CCCCCCCCCCCEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCCC
SRRKVQTFCQQLRQSGTDEAQLARLHAPIGYNIGAETPEEIAISILAEVLQIKNRAAGGL
CCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
MKQNIRLQRNRLVAIRGAGDIATGVALRLYHAGFQVLMLEVAKPTVIRRSVAFAQAIFDG
HHHCCEEECCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCC
ESTVEGVTARRADGTEQAFSLIEQGIIPVLVDPQCLTLAALQPHYLVDAILAKQNLGTCR
CCHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCHHEEECCCCHHHHHHHHHHCCCCCCC
DMAPVTVALGPGFEAGQDCDAVIETNRGHHLGRVIYRGFAQANTGIPGNINGHTTRRVIR
CCCCEEEEECCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
APHTGIMHCCVKLGDLVNEGDIIAHIDTTPVLSPLQGMVRGLLSEGLEVSAGFKIGDVDP
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCEEECCCCC
RGAQADFTTVSDKARAIGGAVLEAMMKLNPQP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQIIESRGSTPRHSAQMLVMKDGGIIGTIGGGMIERLVIEQAMLALAERKPRVFHGRMA
CCCHHHCCCCCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHCCHHH
RSGQDAVGSDCGGAMSVYIDVHGLRPRLVLIGAGHVNRAIAHAAASLGFDIHVADAYQDS
CCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECHHHHC
LDPALFPPGTRLHHGDTFTQLINAMQIEEESFVIIATNSQDKEALDCLIGKPLYYLGLLG
CCCCCCCCCCCEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCCC
SRRKVQTFCQQLRQSGTDEAQLARLHAPIGYNIGAETPEEIAISILAEVLQIKNRAAGGL
CCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
MKQNIRLQRNRLVAIRGAGDIATGVALRLYHAGFQVLMLEVAKPTVIRRSVAFAQAIFDG
HHHCCEEECCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCC
ESTVEGVTARRADGTEQAFSLIEQGIIPVLVDPQCLTLAALQPHYLVDAILAKQNLGTCR
CCHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCHHEEECCCCHHHHHHHHHHCCCCCCC
DMAPVTVALGPGFEAGQDCDAVIETNRGHHLGRVIYRGFAQANTGIPGNINGHTTRRVIR
CCCCEEEEECCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC
APHTGIMHCCVKLGDLVNEGDIIAHIDTTPVLSPLQGMVRGLLSEGLEVSAGFKIGDVDP
CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCEEECCCCC
RGAQADFTTVSDKARAIGGAVLEAMMKLNPQP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]