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The map label for this gene is ygaC [H]

Identifier: 238921367

GI number: 238921367

Start: 3405041

End: 3405376

Strand: Direct

Name: ygaC [H]

Synonym: NT01EI_3511

Alternate gene names: 238921367

Gene position: 3405041-3405376 (Clockwise)

Preceding gene: 238921366

Following gene: 238921370

Centisome position: 89.32

GC content: 60.12

Gene sequence:

>336_bases
ATGTATTTACGTCCCGATGAGGTCGCACAGGTTCTGCAGCGCGCCGGGTTTACCCGCGATTCAGTCAGCGATCAGGCCTA
TGGTTTTCATAAGGGAGAGCACTATGTGTATGTCAATCGCGAGGTACGGCTCGGGCGAACCGCACTGCTGATCCACCCGG
CGCTGGCCCAACGCAGCCTACGCTTTGCCCAGCCCTCTGCCGTCCAGCGTAGCAGCCCGGCCTACGTCCGCTTTCCGCCT
GATCCCGACGCCGCGTCACCGGCTTTTATCGGTGTTCCCCACGGCTTTACCTCGCGCGAACGTTTGAATCACTATCTGGC
GCAGATGTTTCCCTGA

Upstream 100 bases:

>100_bases
CGGCGATCGCCGTGGATCTCAAGCCTTCCAGAAAAGTCCGCTTGTGACGTGCGGCCTATCCGTTAAGGTCATAGGACAGT
AATAAACAGGGAGAATGACG

Downstream 100 bases:

>100_bases
GCGATCCCTACCACAGCAGGCGGCCGATTAGCGGCGAAAGCAGCACTGTCACCACGCCGGCCAGCATCATCACCAGGCTG
GAGACAACGCCTTCGGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MYLRPDEVAQVLQRAGFTRDSVSDQAYGFHKGEHYVYVNREVRLGRTALLIHPALAQRSLRFAQPSAVQRSSPAYVRFPP
DPDAASPAFIGVPHGFTSRERLNHYLAQMFP

Sequences:

>Translated_111_residues
MYLRPDEVAQVLQRAGFTRDSVSDQAYGFHKGEHYVYVNREVRLGRTALLIHPALAQRSLRFAQPSAVQRSSPAYVRFPP
DPDAASPAFIGVPHGFTSRERLNHYLAQMFP
>Mature_111_residues
MYLRPDEVAQVLQRAGFTRDSVSDQAYGFHKGEHYVYVNREVRLGRTALLIHPALAQRSLRFAQPSAVQRSSPAYVRFPP
DPDAASPAFIGVPHGFTSRERLNHYLAQMFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789026, Length=110, Percent_Identity=50.9090909090909, Blast_Score=117, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018994 [H]

Pfam domain/function: PF09400 DUF2002 [H]

EC number: NA

Molecular weight: Translated: 12569; Mature: 12569

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRPDEVAQVLQRAGFTRDSVSDQAYGFHKGEHYVYVNREVRLGRTALLIHPALAQRSL
CCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEECCEECCCCEEEEECHHHHHHHH
RFAQPSAVQRSSPAYVRFPPDPDAASPAFIGVPHGFTSRERLNHYLAQMFP
CCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYLRPDEVAQVLQRAGFTRDSVSDQAYGFHKGEHYVYVNREVRLGRTALLIHPALAQRSL
CCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEECCEECCCCEEEEECHHHHHHHH
RFAQPSAVQRSSPAYVRFPPDPDAASPAFIGVPHGFTSRERLNHYLAQMFP
CCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]