| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yjgM [H]
Identifier: 238921316
GI number: 238921316
Start: 3353559
End: 3354062
Strand: Direct
Name: yjgM [H]
Synonym: NT01EI_3460
Alternate gene names: 238921316
Gene position: 3353559-3354062 (Clockwise)
Preceding gene: 238921315
Following gene: 238921318
Centisome position: 87.97
GC content: 66.87
Gene sequence:
>504_bases ATGACCGACCAACCCGCCCCCGACATCCGCATTCGCCCACTGACCGCCGCCGACAATGGGGCGATTGCCGACGTGATCCG CCGCGTCTCTGCCGAATGCGGCCTGAGCGCCGACAAGGGGTTCACCGTCTCCGATCCCAATCTGGATCGTCTGGCACAGA CCTATGCGACACCGCGCAGCGCCTACTGGGTCGTCGAACTGGAGGGGCTGGTGGCAGGGGGCGGGGGCGTCGCGCCGCTG GAGGGGGCGGCACCACACCTGTGTGAGCTGCAAAAAATGTACTTTCTGCCCGCGCTGCGCGGACGCGGTCTGGCCAAGCG CCTGGCCCTGCAGGCGCTGGACTTCGCCCGTGCGCAGGGGTTCACCCACTGCTATCTGGAGACCACCGCCACCCTGCACG ACGCCATCACCCTGTACCGTCATCTCGGCTTTGAGCCTATCGACGCCGCGCTGGGTGCCACCCGCCACGTGGACTGTGAA GTTCGCATGCTGCGTACGCTATAG
Upstream 100 bases:
>100_bases ATCCGCATCGCGCCGCTTTCCCCGGCGGCAGCTTGCATAATGGAGGGCGACGGTGCTATTTAAGAGGCCTCTTACCCGCT CACTGAACAGGGATCCCCAG
Downstream 100 bases:
>100_bases GCGATCGGCCTGCGGAACACCCGCCGCCCAGGAAGAGGACAATCTGGCCCAATCGACGCACCCTCGGAGTGCGGCCAGGC AGGCCAGGTCTCAACCACCG
Product: transcriptional regulator, MarR family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTDQPAPDIRIRPLTAADNGAIADVIRRVSAECGLSADKGFTVSDPNLDRLAQTYATPRSAYWVVELEGLVAGGGGVAPL EGAAPHLCELQKMYFLPALRGRGLAKRLALQALDFARAQGFTHCYLETTATLHDAITLYRHLGFEPIDAALGATRHVDCE VRMLRTL
Sequences:
>Translated_167_residues MTDQPAPDIRIRPLTAADNGAIADVIRRVSAECGLSADKGFTVSDPNLDRLAQTYATPRSAYWVVELEGLVAGGGGVAPL EGAAPHLCELQKMYFLPALRGRGLAKRLALQALDFARAQGFTHCYLETTATLHDAITLYRHLGFEPIDAALGATRHVDCE VRMLRTL >Mature_166_residues TDQPAPDIRIRPLTAADNGAIADVIRRVSAECGLSADKGFTVSDPNLDRLAQTYATPRSAYWVVELEGLVAGGGGVAPLE GAAPHLCELQKMYFLPALRGRGLAKRLALQALDFARAQGFTHCYLETTATLHDAITLYRHLGFEPIDAALGATRHVDCEV RMLRTL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI48995002, Length=157, Percent_Identity=68.7898089171974, Blast_Score=196, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 18059; Mature: 17928
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQPAPDIRIRPLTAADNGAIADVIRRVSAECGLSADKGFTVSDPNLDRLAQTYATPRS CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCC AYWVVELEGLVAGGGGVAPLEGAAPHLCELQKMYFLPALRGRGLAKRLALQALDFARAQG EEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC FTHCYLETTATLHDAITLYRHLGFEPIDAALGATRHVDCEVRMLRTL CEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure TDQPAPDIRIRPLTAADNGAIADVIRRVSAECGLSADKGFTVSDPNLDRLAQTYATPRS CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCCC AYWVVELEGLVAGGGGVAPLEGAAPHLCELQKMYFLPALRGRGLAKRLALQALDFARAQG EEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC FTHCYLETTATLHDAITLYRHLGFEPIDAALGATRHVDCEVRMLRTL CEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8253666; 11677609 [H]