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The map label for this gene is 238921277

Identifier: 238921277

GI number: 238921277

Start: 3306596

End: 3306892

Strand: Direct

Name: 238921277

Synonym: NT01EI_3420

Alternate gene names: NA

Gene position: 3306596-3306892 (Clockwise)

Preceding gene: 238921275

Following gene: 238921278

Centisome position: 86.73

GC content: 48.15

Gene sequence:

>297_bases
GTGAAGGAGTTTGATCAGACAACACCACTGCTGTATCGCGCTGTCTGCGAAGGCCGGACCATGAAGAAAGCGACAATCAA
GATGTACCGTATTCTGGAATCGGGCATGGAGGCTGAGTACTTCAATATCATTCTGGAAAACGTTAAGTTCACGACTGTTG
CGCCATACCTGGCGCCTAACGGCATGAGTAGCACTCACCTTGAAACGCTCGAATTGCGTTATGAGGCGATCACCTGGAAG
TATACGGAAGGAAATATTATCTATCGTGATTTATGGAACGATCGCTGCTGTGCCTGA

Upstream 100 bases:

>100_bases
TTCTATCGAGTTAAAATCATTCTCTCACGGTGTCACTATCCCGGTTGACCCGAGCTGGGGAAAACTGACAGGGACGCGCG
TTCATCGTCCTATCACGATA

Downstream 100 bases:

>100_bases
CAACTAAGGGCGTCAGAGGAAGCAAATACCCCCTCTGACGCTAACGAGGAGAGAAAATAGTCGACTTAACCGCAGAACAG
CGACAGCTGGCGAAAACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Hcp1 Family Type VI Secretion System Effector; Hemolysin-Coregulated Protein; Hcp Family Type VI Secretion System Effector; Hcp Family T6SS; Virulence Factor For Secretion Apparatus

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKEFDQTTPLLYRAVCEGRTMKKATIKMYRILESGMEAEYFNIILENVKFTTVAPYLAPNGMSSTHLETLELRYEAITWK
YTEGNIIYRDLWNDRCCA

Sequences:

>Translated_98_residues
MKEFDQTTPLLYRAVCEGRTMKKATIKMYRILESGMEAEYFNIILENVKFTTVAPYLAPNGMSSTHLETLELRYEAITWK
YTEGNIIYRDLWNDRCCA
>Mature_98_residues
MKEFDQTTPLLYRAVCEGRTMKKATIKMYRILESGMEAEYFNIILENVKFTTVAPYLAPNGMSSTHLETLELRYEAITWK
YTEGNIIYRDLWNDRCCA

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11515; Mature: 11515

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFDQTTPLLYRAVCEGRTMKKATIKMYRILESGMEAEYFNIILENVKFTTVAPYLAPN
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC
GMSSTHLETLELRYEAITWKYTEGNIIYRDLWNDRCCA
CCCCCCHHHHEEEEEEEEEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKEFDQTTPLLYRAVCEGRTMKKATIKMYRILESGMEAEYFNIILENVKFTTVAPYLAPN
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC
GMSSTHLETLELRYEAITWKYTEGNIIYRDLWNDRCCA
CCCCCCHHHHEEEEEEEEEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA