Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921275

Identifier: 238921275

GI number: 238921275

Start: 3305488

End: 3306177

Strand: Direct

Name: 238921275

Synonym: NT01EI_3419

Alternate gene names: NA

Gene position: 3305488-3306177 (Clockwise)

Preceding gene: 238921274

Following gene: 238921277

Centisome position: 86.71

GC content: 42.46

Gene sequence:

>690_bases
ATGTACAACAATGAAATCATCAGTTACTTACAGGCCAACAAAATTCTCGCATTAAAACTCGATCACGCATTAACAGGGGT
AGGAAACGCTGTATCAAATCAGATCAAAACGATCGGCGCAGGTGCAACGCGCGCGCTGTATTATACATCCTGCTTTACTG
ATGAATATCAGGATGTATGCCAGAAACAAAAGTCTGAAGATATTCGATTTACTAAAGGCGTTGATCATATTATAAAGCAT
GAAAATATTGTATATGAAATTCTCAGAATATACTTTGAAGAGGTATTCCGGCACAAAACGTCCGATCAACTAGAGCACAT
CAAACAACTGTTAATGGCAGTAAATATCCATATTGCCGCAAGCTCACTCACAAACACGGGATTTGCTTTGGCAACAGCAT
CATTTGTCGCTGCAGGCATGAATCTAAGCCTTGAACTCAGTGCGTTGGCAGTGCGAAGAGCTGGACAGGTTGTAGGTGTT
ATCGGCATCTACGGCGTAGTCCAGAAAGCAGGAGATAGTGCGCATCATCTTCACATTACTTATCCAGCTTACTACTCAGC
GTTATACGTTCAAGAGCTGGAAATGATGTACTTCCTGATAGAGCCATTGTTTGAGCGGGCCCAGGTGTTTAAAGCGCAAT
GGGTATCGGATGATGAGATTGCAAACACCATTACCAGGATGGTTCGATAA

Upstream 100 bases:

>100_bases
GGCTGAATTATTCTCCGTCTCCCGCCCCACGGTCTATCGGACGCTTTCACGTGGAAAATAATGGAAAACTGGATTTAATG
AGAATTAACATGGAGCGGTT

Downstream 100 bases:

>100_bases
TCATGATAAATCTTATTAAAAGGTTTTTCAGGCGGATATTCAGGTCATTAATATCGATGTACGGCCCCGCCTTATTGACA
CTTCTATTTGCAGTTGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MYNNEIISYLQANKILALKLDHALTGVGNAVSNQIKTIGAGATRALYYTSCFTDEYQDVCQKQKSEDIRFTKGVDHIIKH
ENIVYEILRIYFEEVFRHKTSDQLEHIKQLLMAVNIHIAASSLTNTGFALATASFVAAGMNLSLELSALAVRRAGQVVGV
IGIYGVVQKAGDSAHHLHITYPAYYSALYVQELEMMYFLIEPLFERAQVFKAQWVSDDEIANTITRMVR

Sequences:

>Translated_229_residues
MYNNEIISYLQANKILALKLDHALTGVGNAVSNQIKTIGAGATRALYYTSCFTDEYQDVCQKQKSEDIRFTKGVDHIIKH
ENIVYEILRIYFEEVFRHKTSDQLEHIKQLLMAVNIHIAASSLTNTGFALATASFVAAGMNLSLELSALAVRRAGQVVGV
IGIYGVVQKAGDSAHHLHITYPAYYSALYVQELEMMYFLIEPLFERAQVFKAQWVSDDEIANTITRMVR
>Mature_229_residues
MYNNEIISYLQANKILALKLDHALTGVGNAVSNQIKTIGAGATRALYYTSCFTDEYQDVCQKQKSEDIRFTKGVDHIIKH
ENIVYEILRIYFEEVFRHKTSDQLEHIKQLLMAVNIHIAASSLTNTGFALATASFVAAGMNLSLELSALAVRRAGQVVGV
IGIYGVVQKAGDSAHHLHITYPAYYSALYVQELEMMYFLIEPLFERAQVFKAQWVSDDEIANTITRMVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25742; Mature: 25742

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNNEIISYLQANKILALKLDHALTGVGNAVSNQIKTIGAGATRALYYTSCFTDEYQDVC
CCCHHHHHHHHHCCEEEEEECHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
QKQKSEDIRFTKGVDHIIKHENIVYEILRIYFEEVFRHKTSDQLEHIKQLLMAVNIHIAA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEE
SSLTNTGFALATASFVAAGMNLSLELSALAVRRAGQVVGVIGIYGVVQKAGDSAHHLHIT
CHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEE
YPAYYSALYVQELEMMYFLIEPLFERAQVFKAQWVSDDEIANTITRMVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYNNEIISYLQANKILALKLDHALTGVGNAVSNQIKTIGAGATRALYYTSCFTDEYQDVC
CCCHHHHHHHHHCCEEEEEECHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
QKQKSEDIRFTKGVDHIIKHENIVYEILRIYFEEVFRHKTSDQLEHIKQLLMAVNIHIAA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEE
SSLTNTGFALATASFVAAGMNLSLELSALAVRRAGQVVGVIGIYGVVQKAGDSAHHLHIT
CHHCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEE
YPAYYSALYVQELEMMYFLIEPLFERAQVFKAQWVSDDEIANTITRMVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA