| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921167
Identifier: 238921167
GI number: 238921167
Start: 3190468
End: 3191565
Strand: Reverse
Name: 238921167
Synonym: NT01EI_3308
Alternate gene names: NA
Gene position: 3191565-3190468 (Counterclockwise)
Preceding gene: 238921168
Following gene: 238921166
Centisome position: 83.72
GC content: 50.55
Gene sequence:
>1098_bases GTGGCGGCCCATGCGGTGGTAAACGCGGCGCTGGCCGCAGCACAGGGGAATAACGCCCTTGCCGGAGCCGCGGGTGCGGC CACCGGCGAAATCGTCGGCATGCTGGCCACGGAGATATACCAGAAACCGGTCGCTGAGCTCAGCGAAAGCGAGAAACAGA CCGTTTCAACACTGGCCACCGTTGCCGCCGGACTGGCCAGTGGTCTGGTGGGAGACTCGGGTGCCTCTGCACTCGCCGGG GCACAGTCGGGTAAGACGACGGTGGAGAATAATCTGCTGGGTGCAACATCTTCAGACAAGCTTGAGACGGTTATTGAAAA GATCAAAAACGGTGATAAGACATTAGCCACCGCGAATGACCTTATTAAACTGGAGAATGCCGATAAGCGCGGTGATGCGC TGATCTCAAAATATCTTAAAGATCCCTCGCAAATGAGCAGCGCGGAACAAGCTGAACTGGCGGCTTATCTACGCATTTAC GCTGGTGAAATGGAAAAAGAATATGGCCAGGCGGTGTCCCAGGAACTGGTTAAGGGGTTGCTGTCTGGGCAAGATTACAT AAAACGCAATCCAGATTCTGAGGCTATGGCACAGGCTCAGAACATTATGAATACATGGGGTTACCATAAATCGAATGCCA GTATTGGTGATACGCCAGTTATGTTCGGAGGCAGTGTGCTGGGACTTACTGTGAAAGGTATGGTGGCTAATGCTGCAATT GGTTTTGGCGTTAATACGGGTGTGCAACTGGTAGGAAAAGATCCTTTCAGTTATGTAGATGCGATTATGGCGGGAGTAAC AGCGGCAGCAACAACGGGGAAAGGTATTATAGCTTCAACACCTATAAATATGGGTGGCGCAGCAATCGGAAGTAGTATTA AGGGGGAAGACCCGACTAATTCGGTTATTGGGGCTGGACTAGGGTCCGTTGCGGGGAGTAAAACGGAAAAATATATTACT GGTGGGCTATCGACAGCAGTTAAAGAAGGTACTGCTGAGGTGGTTGGCACTGTTGGCGGTTCTACAGCAAATGAAATAGT CAGTGGCGCTGCAAAAAACATTCTTGATAAAATGGAGAATAAAGATGAGAGAGAGTAA
Upstream 100 bases:
>100_bases GGGGCTGGCGGGCGGCAACCTGCAGGCGGCGCTGGCGGGCGGCGCGGCGCCGTATATTAGTGAGATAATCAAGCAGAGCA CCCCGGACGGCGCGGGGCGT
Downstream 100 bases:
>100_bases AACACATGAGCTTATTACCCTAATTTACCGTTGTTTTATTGTGTTTTTTTGTATTTGTTTTATGGCAAATATATTGGGGT TATTGCTGGTTTTTTTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSESEKQTVSTLATVAAGLASGLVGDSGASALAG AQSGKTTVENNLLGATSSDKLETVIEKIKNGDKTLATANDLIKLENADKRGDALISKYLKDPSQMSSAEQAELAAYLRIY AGEMEKEYGQAVSQELVKGLLSGQDYIKRNPDSEAMAQAQNIMNTWGYHKSNASIGDTPVMFGGSVLGLTVKGMVANAAI GFGVNTGVQLVGKDPFSYVDAIMAGVTAAATTGKGIIASTPINMGGAAIGSSIKGEDPTNSVIGAGLGSVAGSKTEKYIT GGLSTAVKEGTAEVVGTVGGSTANEIVSGAAKNILDKMENKDERE
Sequences:
>Translated_365_residues MAAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSESEKQTVSTLATVAAGLASGLVGDSGASALAG AQSGKTTVENNLLGATSSDKLETVIEKIKNGDKTLATANDLIKLENADKRGDALISKYLKDPSQMSSAEQAELAAYLRIY AGEMEKEYGQAVSQELVKGLLSGQDYIKRNPDSEAMAQAQNIMNTWGYHKSNASIGDTPVMFGGSVLGLTVKGMVANAAI GFGVNTGVQLVGKDPFSYVDAIMAGVTAAATTGKGIIASTPINMGGAAIGSSIKGEDPTNSVIGAGLGSVAGSKTEKYIT GGLSTAVKEGTAEVVGTVGGSTANEIVSGAAKNILDKMENKDERE >Mature_364_residues AAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSESEKQTVSTLATVAAGLASGLVGDSGASALAGA QSGKTTVENNLLGATSSDKLETVIEKIKNGDKTLATANDLIKLENADKRGDALISKYLKDPSQMSSAEQAELAAYLRIYA GEMEKEYGQAVSQELVKGLLSGQDYIKRNPDSEAMAQAQNIMNTWGYHKSNASIGDTPVMFGGSVLGLTVKGMVANAAIG FGVNTGVQLVGKDPFSYVDAIMAGVTAAATTGKGIIASTPINMGGAAIGSSIKGEDPTNSVIGAGLGSVAGSKTEKYITG GLSTAVKEGTAEVVGTVGGSTANEIVSGAAKNILDKMENKDERE
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36810; Mature: 36679
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSESEKQTVSTLAT CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAGLASGLVGDSGASALAGAQSGKTTVENNLLGATSSDKLETVIEKIKNGDKTLATAND HHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH LIKLENADKRGDALISKYLKDPSQMSSAEQAELAAYLRIYAGEMEKEYGQAVSQELVKGL HHEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGQDYIKRNPDSEAMAQAQNIMNTWGYHKSNASIGDTPVMFGGSVLGLTVKGMVANAAI HCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH GFGVNTGVQLVGKDPFSYVDAIMAGVTAAATTGKGIIASTPINMGGAAIGSSIKGEDPTN CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCCC SVIGAGLGSVAGSKTEKYITGGLSTAVKEGTAEVVGTVGGSTANEIVSGAAKNILDKMEN HHHHCCHHHHCCCCCHHHHHCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC KDERE CCCCC >Mature Secondary Structure AAHAVVNAALAAAQGNNALAGAAGAATGEIVGMLATEIYQKPVAELSESEKQTVSTLAT CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAGLASGLVGDSGASALAGAQSGKTTVENNLLGATSSDKLETVIEKIKNGDKTLATAND HHHHHHHHCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH LIKLENADKRGDALISKYLKDPSQMSSAEQAELAAYLRIYAGEMEKEYGQAVSQELVKGL HHEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSGQDYIKRNPDSEAMAQAQNIMNTWGYHKSNASIGDTPVMFGGSVLGLTVKGMVANAAI HCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH GFGVNTGVQLVGKDPFSYVDAIMAGVTAAATTGKGIIASTPINMGGAAIGSSIKGEDPTN CCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCCCC SVIGAGLGSVAGSKTEKYITGGLSTAVKEGTAEVVGTVGGSTANEIVSGAAKNILDKMEN HHHHCCHHHHCCCCCHHHHHCCHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC KDERE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA