Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238921164

Identifier: 238921164

GI number: 238921164

Start: 3188393

End: 3188791

Strand: Reverse

Name: 238921164

Synonym: NT01EI_3305

Alternate gene names: NA

Gene position: 3188791-3188393 (Counterclockwise)

Preceding gene: 238921165

Following gene: 238921163

Centisome position: 83.64

GC content: 30.08

Gene sequence:

>399_bases
ATGGAGAGATCACACATTGAGGACTATATATTCATTAGCTTTATGTATAAATCAAAATACATAACAAAAGAACAATATGA
CACTTACATGACATTGTGGAATGAAATAAACAAGATAACACCAACGCCAGATATTATTATTTTTTTAGATTTCAGCGTTG
ACCACTCACTTCAAAATATAAAAAATGACGAGTTAAAAGGGATTCGACCTCGGGAGTTTCCAAATCCCGAATTAAAAGAA
AAATGGATAACAGGGTGGTTTGATGAATATCAAGGTTTCACGCAAAACCTACCAAGAGAATTAAAAGAAAATGTGATTAT
TTACAATAAGAAAAAAACAATTGATGAATTGTTAAGTGAAGTGATCAATAAAATAACCGGAATAAGGAATATGAAATGA

Upstream 100 bases:

>100_bases
TGATAAAACAGAGAAATACGGATATTTACTTCAGTTAAACTTCATGATACAACGTTCTCTTTTAATAAAGTCATGGTTGG
ATAAAGGATTCAACCTAATC

Downstream 100 bases:

>100_bases
GACAGCGAACAATTGTTTGTCCAATTATAGAAAACAATGATGAGTATCTCATCTGTAAAATGTCTGATGATCGAGGAGTT
TTTCCTGGCCAATGGGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MERSHIEDYIFISFMYKSKYITKEQYDTYMTLWNEINKITPTPDIIIFLDFSVDHSLQNIKNDELKGIRPREFPNPELKE
KWITGWFDEYQGFTQNLPRELKENVIIYNKKKTIDELLSEVINKITGIRNMK

Sequences:

>Translated_132_residues
MERSHIEDYIFISFMYKSKYITKEQYDTYMTLWNEINKITPTPDIIIFLDFSVDHSLQNIKNDELKGIRPREFPNPELKE
KWITGWFDEYQGFTQNLPRELKENVIIYNKKKTIDELLSEVINKITGIRNMK
>Mature_132_residues
MERSHIEDYIFISFMYKSKYITKEQYDTYMTLWNEINKITPTPDIIIFLDFSVDHSLQNIKNDELKGIRPREFPNPELKE
KWITGWFDEYQGFTQNLPRELKENVIIYNKKKTIDELLSEVINKITGIRNMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15973; Mature: 15973

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSHIEDYIFISFMYKSKYITKEQYDTYMTLWNEINKITPTPDIIIFLDFSVDHSLQNI
CCCCHHHHHHHEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHC
KNDELKGIRPREFPNPELKEKWITGWFDEYQGFTQNLPRELKENVIIYNKKKTIDELLSE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCHHHHCCEEEECCHHHHHHHHHH
VINKITGIRNMK
HHHHHHCCCCCC
>Mature Secondary Structure
MERSHIEDYIFISFMYKSKYITKEQYDTYMTLWNEINKITPTPDIIIFLDFSVDHSLQNI
CCCCHHHHHHHEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHC
KNDELKGIRPREFPNPELKEKWITGWFDEYQGFTQNLPRELKENVIIYNKKKTIDELLSE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCHHHHCCEEEECCHHHHHHHHHH
VINKITGIRNMK
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA