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The map label for this gene is nudI [H]

Identifier: 238921163

GI number: 238921163

Start: 3187968

End: 3188261

Strand: Reverse

Name: nudI [H]

Synonym: NT01EI_3304

Alternate gene names: 238921163

Gene position: 3188261-3187968 (Counterclockwise)

Preceding gene: 238921164

Following gene: 238921158

Centisome position: 83.63

GC content: 29.59

Gene sequence:

>294_bases
ATGCTCGACGCATTAACCAGAGAAATAAATGAAGAGTTAGGCGACAGTTTAAATATAACAAAAATATCTCCTTGGTCATT
TCGTGATGACATCAGAGAAAAAACATACAAAGATGGAACCAAAGAAAAAATATATATGATATATCTTATATTTGATTGTA
AAAGTTCGAATAGAGATATATCATTTAATGATGAGTTCCAAGAGGTCGCATGGGTATCAAAAGACAAATTAAATGAATTC
AATTTAAATGAGGCAACTAAAATAACCTTCACCGAGAAAGGATTCATAAAATAA

Upstream 100 bases:

>100_bases
AAACAATGATGAGTATCTCATCTGTAAAATGTCTGATGATCGAGGAGTTTTTCCTGGCCAATGGGCTCTACCTGGTGGAG
GGATTGAACCAGGAGAGAAG

Downstream 100 bases:

>100_bases
TTGTAAACACCACTAGTTATAACACCGCCCAGAATACCGGGCGACCCTGTACACGATTCTGTGTAAATGCCTTTTCTCAG
AAGTGACCGTCCAGACGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLDALTREINEELGDSLNITKISPWSFRDDIREKTYKDGTKEKIYMIYLIFDCKSSNRDISFNDEFQEVAWVSKDKLNEF
NLNEATKITFTEKGFIK

Sequences:

>Translated_97_residues
MLDALTREINEELGDSLNITKISPWSFRDDIREKTYKDGTKEKIYMIYLIFDCKSSNRDISFNDEFQEVAWVSKDKLNEF
NLNEATKITFTEKGFIK
>Mature_97_residues
MLDALTREINEELGDSLNITKISPWSFRDDIREKTYKDGTKEKIYMIYLIFDCKSSNRDISFNDEFQEVAWVSKDKLNEF
NLNEATKITFTEKGFIK

Specific function: Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP) [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788585, Length=94, Percent_Identity=57.4468085106383, Blast_Score=119, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 11485; Mature: 11485

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDALTREINEELGDSLNITKISPWSFRDDIREKTYKDGTKEKIYMIYLIFDCKSSNRDI
CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC
SFNDEFQEVAWVSKDKLNEFNLNEATKITFTEKGFIK
CCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MLDALTREINEELGDSLNITKISPWSFRDDIREKTYKDGTKEKIYMIYLIFDCKSSNRDI
CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC
SFNDEFQEVAWVSKDKLNEFNLNEATKITFTEKGFIK
CCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA