| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is phoA [H]
Identifier: 238921124
GI number: 238921124
Start: 3140877
End: 3142322
Strand: Reverse
Name: phoA [H]
Synonym: NT01EI_3263
Alternate gene names: 238921124
Gene position: 3142322-3140877 (Counterclockwise)
Preceding gene: 238921125
Following gene: 238921123
Centisome position: 82.43
GC content: 60.44
Gene sequence:
>1446_bases ATGGCGAGCCATACCCCTTTCTCCCTTTCTCTGCTGATGTTTTCTCTTGGTCTTGCCCTGCCGCTGCAGGCCGCGCCCGC TGCGCCGAGCGCAGAGCAGGTGCTTACCGAACGCGCCGCGCACGGCGATATTACCCAGCGGGGAGGCGCCCGCCGCCTGC TCGGCGATCAGACAGCTGCGCTGCAGGCGTCGCTGAGTACCCGCCCGGCCAAGAACGTGATCCTGCTGATCGGCGATGGC ATGGGAGATGCGGAGATCACCGCCGCCCGTAACTATGCGGCCGGCGCGGGCGGAATGCTGCGCGGTATCGATGCCCTACC GCTGACCGGGCAATACACGCACTATGCCCTGGATCGTAAAACCCATAAACCGGACTATGTGACGGACTCTGCGGCATCGG CTACCGCCTGGAGCAGTGGGGTGAAAACCTATAACGGCGCATTGGGTATTGATGTAACAGGTAAACCTTATCCGACGCTG TTGGAGATGGCGCGTGCAGCGGGCAAGGCCACCGGAAACGTCTCGACCGCAGAGCTGCAGGACGCCACGCCGGCGGCGAT GTTCGCCCACGTCAGCGGACGCAAATGTTATGGCCCGCAGCAGACCCTGGAGAAATGTCCGGAGAATGCGTTGGAAAACG GTGGGGCTGGCTCGATCAGCGAACAAATGTTGAAAGCGCGGGCCGATGTGACGCTGGGCGGCGGTGCAAAAACGTTTACC CAGATAGTGGGGGCCGGTGAGTATAAGGGTAAGACGTTGCTCCAGCAGGCACAGGCGCAGGGGTACCACATCGTTAACGA TCTGGTGGGTATGGATGCGGTGACGGTGGCAGATCAGAAGCGTCCTTTGCTGGGGCTGTTCGCCGAGGGCAATATGGCGG TGCGTTGGCTGGGGCCAAAAGCCAGTCTGCACGGTAACCTGGAGCAGGCGCCGGTCACCTGCCAGCCGAATCCGCAGCGC AGTGACAGCCAGCCGACGCTGGCACAGATGACCGGCAAAGCCATTTCGCTTTTGAGCAAGAATCCAAATGGTTTCTTCCT GCAGGTCGAAGGTGCTTCTATCGATAAACAGGATCATGCCGCCAATCCGTGCGGTCAGTTTGGTGAGACGGTCGATTTGG ATGAGGCGGTTCAAAAGGCGCTGGAGTTTGCCCGCCGTGACGGGAATACCCTGGTAGTGGTAACGGCGGATCATGCTCAT AGCAGCCAGATTATCCCCAACGATGCCAAGGCGCCGGGGCTGACTCAGACGCTTATCACCCAGGATGGGGTACCGATGAC CATTAGCTACGGCACCGCTGAGGAGGCGGACAGCCAGGAGCATACCGGCTCCCAGATACGTATCGCTGCGTATGGTCCTC ATGCCGGTAACGTAGTGGGGCTGACGGATCAGACGGATCTGTTCTTTACCCTGCGCGATGCGATGGGACTTAACGCCGCG AAATAA
Upstream 100 bases:
>100_bases GTTCACGGGATCGTCACCGAACCGACATTATCTCTCCTTATACTCTGTTCCAACTTATTCATTAGTTGAATGATTTTCCT CTTGGACACGGAGTCTTATC
Downstream 100 bases:
>100_bases CGGCATAACAGCAGTATCGGCCCGGTGCGGCGTAGTGGCGGCAGCGGGCCGTTTTTTATTGCGTTAAAGTATCAGTGAAC TATTTGTTGTTGTTGTGTTA
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 481; Mature: 480
Protein sequence:
>481_residues MASHTPFSLSLLMFSLGLALPLQAAPAAPSAEQVLTERAAHGDITQRGGARRLLGDQTAALQASLSTRPAKNVILLIGDG MGDAEITAARNYAAGAGGMLRGIDALPLTGQYTHYALDRKTHKPDYVTDSAASATAWSSGVKTYNGALGIDVTGKPYPTL LEMARAAGKATGNVSTAELQDATPAAMFAHVSGRKCYGPQQTLEKCPENALENGGAGSISEQMLKARADVTLGGGAKTFT QIVGAGEYKGKTLLQQAQAQGYHIVNDLVGMDAVTVADQKRPLLGLFAEGNMAVRWLGPKASLHGNLEQAPVTCQPNPQR SDSQPTLAQMTGKAISLLSKNPNGFFLQVEGASIDKQDHAANPCGQFGETVDLDEAVQKALEFARRDGNTLVVVTADHAH SSQIIPNDAKAPGLTQTLITQDGVPMTISYGTAEEADSQEHTGSQIRIAAYGPHAGNVVGLTDQTDLFFTLRDAMGLNAA K
Sequences:
>Translated_481_residues MASHTPFSLSLLMFSLGLALPLQAAPAAPSAEQVLTERAAHGDITQRGGARRLLGDQTAALQASLSTRPAKNVILLIGDG MGDAEITAARNYAAGAGGMLRGIDALPLTGQYTHYALDRKTHKPDYVTDSAASATAWSSGVKTYNGALGIDVTGKPYPTL LEMARAAGKATGNVSTAELQDATPAAMFAHVSGRKCYGPQQTLEKCPENALENGGAGSISEQMLKARADVTLGGGAKTFT QIVGAGEYKGKTLLQQAQAQGYHIVNDLVGMDAVTVADQKRPLLGLFAEGNMAVRWLGPKASLHGNLEQAPVTCQPNPQR SDSQPTLAQMTGKAISLLSKNPNGFFLQVEGASIDKQDHAANPCGQFGETVDLDEAVQKALEFARRDGNTLVVVTADHAH SSQIIPNDAKAPGLTQTLITQDGVPMTISYGTAEEADSQEHTGSQIRIAAYGPHAGNVVGLTDQTDLFFTLRDAMGLNAA K >Mature_480_residues ASHTPFSLSLLMFSLGLALPLQAAPAAPSAEQVLTERAAHGDITQRGGARRLLGDQTAALQASLSTRPAKNVILLIGDGM GDAEITAARNYAAGAGGMLRGIDALPLTGQYTHYALDRKTHKPDYVTDSAASATAWSSGVKTYNGALGIDVTGKPYPTLL EMARAAGKATGNVSTAELQDATPAAMFAHVSGRKCYGPQQTLEKCPENALENGGAGSISEQMLKARADVTLGGGAKTFTQ IVGAGEYKGKTLLQQAQAQGYHIVNDLVGMDAVTVADQKRPLLGLFAEGNMAVRWLGPKASLHGNLEQAPVTCQPNPQRS DSQPTLAQMTGKAISLLSKNPNGFFLQVEGASIDKQDHAANPCGQFGETVDLDEAVQKALEFARRDGNTLVVVTADHAHS SQIIPNDAKAPGLTQTLITQDGVPMTISYGTAEEADSQEHTGSQIRIAAYGPHAGNVVGLTDQTDLFFTLRDAMGLNAAK
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI94721246, Length=480, Percent_Identity=27.9166666666667, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI157266296, Length=481, Percent_Identity=28.4823284823285, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI116734717, Length=395, Percent_Identity=31.1392405063291, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI157266292, Length=374, Percent_Identity=29.6791443850267, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI294660770, Length=385, Percent_Identity=30.1298701298701, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI48994877, Length=444, Percent_Identity=75.4504504504504, Blast_Score=697, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320689, Length=365, Percent_Identity=31.7808219178082, Blast_Score=130, Evalue=3e-31, Organism=Drosophila melanogaster, GI19921912, Length=473, Percent_Identity=29.3868921775898, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI21355151, Length=477, Percent_Identity=28.9308176100629, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI21355981, Length=425, Percent_Identity=29.4117647058824, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI18859923, Length=349, Percent_Identity=31.8051575931232, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI21358067, Length=532, Percent_Identity=27.2556390977444, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24585213, Length=388, Percent_Identity=29.639175257732, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI21355149, Length=506, Percent_Identity=25.8893280632411, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24651554, Length=495, Percent_Identity=27.6767676767677, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI85725200, Length=416, Percent_Identity=26.6826923076923, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI85815833, Length=416, Percent_Identity=26.6826923076923, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI24657827, Length=369, Percent_Identity=31.4363143631436, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24657835, Length=354, Percent_Identity=27.9661016949153, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24657842, Length=363, Percent_Identity=25.8953168044077, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 50284; Mature: 50153
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHTPFSLSLLMFSLGLALPLQAAPAAPSAEQVLTERAAHGDITQRGGARRLLGDQTAA CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHCCCHHH LQASLSTRPAKNVILLIGDGMGDAEITAARNYAAGAGGMLRGIDALPLTGQYTHYALDRK HHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCEEEECCC THKPDYVTDSAASATAWSSGVKTYNGALGIDVTGKPYPTLLEMARAAGKATGNVSTAELQ CCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHC DATPAAMFAHVSGRKCYGPQQTLEKCPENALENGGAGSISEQMLKARADVTLGGGAKTFT CCCCHHHEEECCCCCCCCHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCEEECCCHHHHH QIVGAGEYKGKTLLQQAQAQGYHIVNDLVGMDAVTVADQKRPLLGLFAEGNMAVRWLGPK HHHCCCCCCCHHHHHHHHHCCCEEHHHHHCCCEEEECCCCCCEEEEEECCCEEEEEECCC ASLHGNLEQAPVTCQPNPQRSDSQPTLAQMTGKAISLLSKNPNGFFLQVEGASIDKQDHA CCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCHHCC ANPCGQFGETVDLDEAVQKALEFARRDGNTLVVVTADHAHSSQIIPNDAKAPGLTQTLIT CCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHC QDGVPMTISYGTAEEADSQEHTGSQIRIAAYGPHAGNVVGLTDQTDLFFTLRDAMGLNAA CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEEHHHCCCCCC K C >Mature Secondary Structure ASHTPFSLSLLMFSLGLALPLQAAPAAPSAEQVLTERAAHGDITQRGGARRLLGDQTAA CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHCCCHHH LQASLSTRPAKNVILLIGDGMGDAEITAARNYAAGAGGMLRGIDALPLTGQYTHYALDRK HHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCEEEECCC THKPDYVTDSAASATAWSSGVKTYNGALGIDVTGKPYPTLLEMARAAGKATGNVSTAELQ CCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHC DATPAAMFAHVSGRKCYGPQQTLEKCPENALENGGAGSISEQMLKARADVTLGGGAKTFT CCCCHHHEEECCCCCCCCHHHHHHHCHHHHHHCCCCCCHHHHHHHHHCCEEECCCHHHHH QIVGAGEYKGKTLLQQAQAQGYHIVNDLVGMDAVTVADQKRPLLGLFAEGNMAVRWLGPK HHHCCCCCCCHHHHHHHHHCCCEEHHHHHCCCEEEECCCCCCEEEEEECCCEEEEEECCC ASLHGNLEQAPVTCQPNPQRSDSQPTLAQMTGKAISLLSKNPNGFFLQVEGASIDKQDHA CCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCHHCC ANPCGQFGETVDLDEAVQKALEFARRDGNTLVVVTADHAHSSQIIPNDAKAPGLTQTLIT CCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHC QDGVPMTISYGTAEEADSQEHTGSQIRIAAYGPHAGNVVGLTDQTDLFFTLRDAMGLNAA CCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCEEEEEHHHCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]