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The map label for this gene is nrfB [H]

Identifier: 238921031

GI number: 238921031

Start: 3042535

End: 3043122

Strand: Reverse

Name: nrfB [H]

Synonym: NT01EI_3161

Alternate gene names: 238921031

Gene position: 3043122-3042535 (Counterclockwise)

Preceding gene: 238921032

Following gene: 238921030

Centisome position: 79.82

GC content: 62.07

Gene sequence:

>588_bases
ATGAACCTACTGCGTTCGTTATTTACCGCCGGGGCGCTGGTCAGTGGGCTGCTGCTTTCCACTCCGTCACTCTCCACCCC
GCCGACGGCGGGAGAGGGGGCGACGCCAGCGCAGGCAGAGGTCGTTTTACAGCGCGATCCCAACCAGGGGTGCCTGGACT
GCCATAAAACACCGCAGGATCGCCTGCACGGGCGTCATAGCCAGGAGAAAAATCCCAATACCGGCTCGGCGATCGCCTGC
AGCAACTGTCATGGCAACGTCTCCCTTGAGCGTCACCGCGACGGTGCGCCGGACGTGATGCGCTTTAACCGTGACGGGCA
TAGCGCTGCACAGCAAAACAGCGTGTGTATGTCCTGCCATCTACCAGAGAAGCTGCAAAAGGCGTTCTGGCCGCACGATG
TACATCTTGCCGCGGTAAGTTGTGCCGCCTGTCACAGCCTGCATCCGCAGTCGGATCCGGTCATCCGGCTGAACGAGCGC
GAGCGCGTCGTGCTGTGCGTAGACTGTCACCGCCAGCAGCAGGATAACCCGGCGTTCGATCCGGCAGCGGTGACGCTGAA
AATGCCGGGTAAGGAGCTGCGGCCATGA

Upstream 100 bases:

>100_bases
TACGGTTGTTCCTGAGTGGGAAGCCCAGGCGCGCAGCGCCGGGCGCCTGGACCATTAACCCCTGCGCCCCGCGCTGCGGG
GCACTGCAGATGGAGTCATC

Downstream 100 bases:

>100_bases
GTTGCTCCCGTCGACGTTTCATCGCCGGGCTGGGCGTCATGGCGCTCTCCGGCGGCGCCTTGCCACGGGTGGTGGCCTCC
GCCGTGACGTCGCAGGGCGT

Product: cytochrome c nitrite reductase pentaheme subunit

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNLLRSLFTAGALVSGLLLSTPSLSTPPTAGEGATPAQAEVVLQRDPNQGCLDCHKTPQDRLHGRHSQEKNPNTGSAIAC
SNCHGNVSLERHRDGAPDVMRFNRDGHSAAQQNSVCMSCHLPEKLQKAFWPHDVHLAAVSCAACHSLHPQSDPVIRLNER
ERVVLCVDCHRQQQDNPAFDPAAVTLKMPGKELRP

Sequences:

>Translated_195_residues
MNLLRSLFTAGALVSGLLLSTPSLSTPPTAGEGATPAQAEVVLQRDPNQGCLDCHKTPQDRLHGRHSQEKNPNTGSAIAC
SNCHGNVSLERHRDGAPDVMRFNRDGHSAAQQNSVCMSCHLPEKLQKAFWPHDVHLAAVSCAACHSLHPQSDPVIRLNER
ERVVLCVDCHRQQQDNPAFDPAAVTLKMPGKELRP
>Mature_195_residues
MNLLRSLFTAGALVSGLLLSTPSLSTPPTAGEGATPAQAEVVLQRDPNQGCLDCHKTPQDRLHGRHSQEKNPNTGSAIAC
SNCHGNVSLERHRDGAPDVMRFNRDGHSAAQQNSVCMSCHLPEKLQKAFWPHDVHLAAVSCAACHSLHPQSDPVIRLNER
ERVVLCVDCHRQQQDNPAFDPAAVTLKMPGKELRP

Specific function: Plays a role in nitrite reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082366, Length=186, Percent_Identity=52.6881720430108, Blast_Score=204, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017564
- InterPro:   IPR011031 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21197; Mature: 21197

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLRSLFTAGALVSGLLLSTPSLSTPPTAGEGATPAQAEVVLQRDPNQGCLDCHKTPQD
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHH
RLHGRHSQEKNPNTGSAIACSNCHGNVSLERHRDGAPDVMRFNRDGHSAAQQNSVCMSCH
HHCCCCCCCCCCCCCCEEEECCCCCCCEEHCCCCCCCHHEEECCCCCCHHHCCCEEEEEC
LPEKLQKAFWPHDVHLAAVSCAACHSLHPQSDPVIRLNERERVVLCVDCHRQQQDNPAFD
CCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
PAAVTLKMPGKELRP
CEEEEEECCCCCCCC
>Mature Secondary Structure
MNLLRSLFTAGALVSGLLLSTPSLSTPPTAGEGATPAQAEVVLQRDPNQGCLDCHKTPQD
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHH
RLHGRHSQEKNPNTGSAIACSNCHGNVSLERHRDGAPDVMRFNRDGHSAAQQNSVCMSCH
HHCCCCCCCCCCCCCCEEEECCCCCCCEEHCCCCCCCHHEEECCCCCCHHHCCCEEEEEC
LPEKLQKAFWPHDVHLAAVSCAACHSLHPQSDPVIRLNERERVVLCVDCHRQQQDNPAFD
CCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCC
PAAVTLKMPGKELRP
CEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]