| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is guaB [H]
Identifier: 238921024
GI number: 238921024
Start: 3035208
End: 3036674
Strand: Reverse
Name: guaB [H]
Synonym: NT01EI_3154
Alternate gene names: 238921024
Gene position: 3036674-3035208 (Counterclockwise)
Preceding gene: 238921026
Following gene: 238921023
Centisome position: 79.65
GC content: 63.26
Gene sequence:
>1467_bases ATGCTACGTATTGTTAAAGAAGCCCTAACGTTTGATGATGTTCTCTTGGTTCCCGCCCATTCTACCGTTCTGCCGAACAC CGCCGAACTTGGCACTCAGCTGACTGCCACTATTCACCTGAACATTCCTATGCTGTCCGCCGCCATGGACACCGTCACCG AAGCGCGTCTGGCGATTGCGCTGGCGCAGGAAGGGGGCATTGGCTTTATCCATAAAAACATGCCCATCGAGCGCCAGGCC GAAGAAGTCCGCCGGGTGAAGAAGCACGAGTCCGGCGTGGTGACCGACCCGCAGACCGTGACGCCGGGCACTACCTTGCG CGAAGTGAAGGCCCTGACCGAGCGTAACGGCTTCGCCGGTTACCCGGTGGTGACGGAAGATAACCAGCTGGTGGGGATCA TCACCGGCCGCGACGTACGCTTCGTGACTGACCTGGAGCAGCCGGTAACCGCGGTGATGACGCCGAAGGCGCGCCTGGTG ACGGTGAAAGAGGGCGAAGCCCGCGACGTGGTGCTGCAGCGCATGCACGAAAAGCGCGTTGAGAAGGCCTTGGTGGTGGA CGATAGCTTCCACCTGCGCGGCATGATCACCGTGAAAGATTTCCAGAAGGCCGAGCGCAAGCCGAACGCCTGTAAGGATG AGCATGGCCGCCTGCGTGTCGGCGCCGCCGTCGGCGCCGGTGCCGGTAACGAAGAGCGCATCGCCGCGCTGGTCGAGGCC GGCGTCGATGTGCTGCTGATCGACTCCTCTCACGGCCACTCCGAAGGTGTGCTGCAGCGCATTCGCGAAACCCGCGCTAA ATTCCCGCAGCTGCAGATCATCGGCGGCAACGTTGCGACGGCCGCCGGCGCCAAGGCGCTGGCTGACGCGGGGGTGAACG CCGTCAAAGTGGGTATCGGCCCGGGCTCTATCTGTACCACCCGTATCGTGACCGGCGTCGGTGTACCGCAGATCACTGCC GTCTCTGACGCCGTCGCCGCCCTGGAGGGGACCGGCATTCCGGTGATCGCCGATGGCGGTATCCGTTTCTCCGGCGACAT CGCCAAGGCGCTGGCCGCCGGCGCCGCCTGCGTCATGGTCGGCTCCATGCTGGCCGGGACCGAAGAGTCCCCGGGAGAGA TCGAGCTGTATCAGGGGCGTTCCTTCAAGTCCTACCGTGGCATGGGCTCGCTGGGCGCGATGTCTAAGGGCTCCTCCGAC CGTTACTTCCAGAGCGATAACGCCGCCGATAAACTGGTGCCGGAAGGCATCGAAGGGCGCGTGGCCTATAAGGGCCGTCT GAAAGAGATCGTACACCAGCAGATGGGCGGCCTGCGCTCCTGCATGGGGCTGACCGGCTGTGCCACCATCGATGAGCTGC GCACCAAGGCGCAGTTCGTGCGCATCACCGGCTCCGGTATTCAGGAGAGCCACGTGCACGACGTGACCATTACCAAAGAG TCACCGAATTACCGTCTGGGTTCCTAA
Upstream 100 bases:
>100_bases TATTTCTGAAAAAAATGCTGGAGGCAACCGATTTCGGCCTGTATAATGCCGCGGCAATATTAAATCTGGTTTGACCTTCC TCTCTGGTGAGATATTGCCC
Downstream 100 bases:
>100_bases CCCGACGAGCCGGGCCCGGTGCAGCGCCGGGCCCGCTGAGTTTGTACCGTTTTGCCCGATCAATTTGCCAATACAGAGCC CCTAATGACGCAAAATATTC
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MLRIVKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIHLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMPIERQA EEVRRVKKHESGVVTDPQTVTPGTTLREVKALTERNGFAGYPVVTEDNQLVGIITGRDVRFVTDLEQPVTAVMTPKARLV TVKEGEARDVVLQRMHEKRVEKALVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAKFPQLQIIGGNVATAAGAKALADAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAVAALEGTGIPVIADGGIRFSGDIAKALAAGAACVMVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSD RYFQSDNAADKLVPEGIEGRVAYKGRLKEIVHQQMGGLRSCMGLTGCATIDELRTKAQFVRITGSGIQESHVHDVTITKE SPNYRLGS
Sequences:
>Translated_488_residues MLRIVKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIHLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMPIERQA EEVRRVKKHESGVVTDPQTVTPGTTLREVKALTERNGFAGYPVVTEDNQLVGIITGRDVRFVTDLEQPVTAVMTPKARLV TVKEGEARDVVLQRMHEKRVEKALVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAKFPQLQIIGGNVATAAGAKALADAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAVAALEGTGIPVIADGGIRFSGDIAKALAAGAACVMVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSD RYFQSDNAADKLVPEGIEGRVAYKGRLKEIVHQQMGGLRSCMGLTGCATIDELRTKAQFVRITGSGIQESHVHDVTITKE SPNYRLGS >Mature_488_residues MLRIVKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIHLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMPIERQA EEVRRVKKHESGVVTDPQTVTPGTTLREVKALTERNGFAGYPVVTEDNQLVGIITGRDVRFVTDLEQPVTAVMTPKARLV TVKEGEARDVVLQRMHEKRVEKALVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIAALVEA GVDVLLIDSSHGHSEGVLQRIRETRAKFPQLQIIGGNVATAAGAKALADAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAVAALEGTGIPVIADGGIRFSGDIAKALAAGAACVMVGSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSD RYFQSDNAADKLVPEGIEGRVAYKGRLKEIVHQQMGGLRSCMGLTGCATIDELRTKAQFVRITGSGIQESHVHDVTITKE SPNYRLGS
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=486, Percent_Identity=40.7407407407407, Blast_Score=321, Evalue=8e-88, Organism=Homo sapiens, GI217035146, Length=484, Percent_Identity=40.495867768595, Blast_Score=320, Evalue=2e-87, Organism=Homo sapiens, GI156616279, Length=484, Percent_Identity=40.495867768595, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI34328928, Length=484, Percent_Identity=40.495867768595, Blast_Score=319, Evalue=4e-87, Organism=Homo sapiens, GI34328930, Length=484, Percent_Identity=40.495867768595, Blast_Score=319, Evalue=4e-87, Organism=Homo sapiens, GI217035152, Length=478, Percent_Identity=40.5857740585774, Blast_Score=312, Evalue=4e-85, Organism=Homo sapiens, GI217035148, Length=484, Percent_Identity=39.6694214876033, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI217035150, Length=484, Percent_Identity=37.1900826446281, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI156104880, Length=247, Percent_Identity=37.246963562753, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=37.246963562753, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=37.246963562753, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=37.246963562753, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=37.246963562753, Blast_Score=160, Evalue=3e-39, Organism=Escherichia coli, GI1788855, Length=488, Percent_Identity=91.1885245901639, Blast_Score=844, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=37.10407239819, Blast_Score=142, Evalue=7e-35, Organism=Caenorhabditis elegans, GI71994385, Length=500, Percent_Identity=35, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71994389, Length=423, Percent_Identity=38.0614657210402, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17560440, Length=219, Percent_Identity=37.8995433789954, Blast_Score=150, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322012, Length=491, Percent_Identity=39.5112016293279, Blast_Score=325, Evalue=1e-89, Organism=Saccharomyces cerevisiae, GI6323585, Length=488, Percent_Identity=39.7540983606557, Blast_Score=320, Evalue=4e-88, Organism=Saccharomyces cerevisiae, GI6323464, Length=488, Percent_Identity=40.5737704918033, Blast_Score=314, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6319352, Length=346, Percent_Identity=39.0173410404624, Blast_Score=239, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=119, Percent_Identity=42.0168067226891, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=40.0826446280992, Blast_Score=319, Evalue=3e-87, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=40.0826446280992, Blast_Score=319, Evalue=3e-87, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=41.1764705882353, Blast_Score=292, Evalue=5e-79,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51765; Mature: 51765
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIVKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIHLNIPMLSAAMDTVTEARLAIA CHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHHHEEEE LAQEGGIGFIHKNMPIERQAEEVRRVKKHESGVVTDPQTVTPGTTLREVKALTERNGFAG EECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC YPVVTEDNQLVGIITGRDVRFVTDLEQPVTAVMTPKARLVTVKEGEARDVVLQRMHEKRV CCEEECCCCEEEEEECCCEEEEECCCCCHHEEECCCEEEEEECCCCHHHHHHHHHHHHHH EKALVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIAALVEA HHEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKFPQLQIIGGNVATAAGAKALADAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCEEHHHCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAVAALEGTGIPVIADGGIRFSGDIAKALAAGAACVMV CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCHHHHHHHHCHHHHHH GSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE VAYKGRLKEIVHQQMGGLRSCMGLTGCATIDELRTKAQFVRITGSGIQESHVHDVTITKE EEEHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCCCCCEEEEEEEEC SPNYRLGS CCCCCCCC >Mature Secondary Structure MLRIVKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIHLNIPMLSAAMDTVTEARLAIA CHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHHHEEEE LAQEGGIGFIHKNMPIERQAEEVRRVKKHESGVVTDPQTVTPGTTLREVKALTERNGFAG EECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC YPVVTEDNQLVGIITGRDVRFVTDLEQPVTAVMTPKARLVTVKEGEARDVVLQRMHEKRV CCEEECCCCEEEEEECCCEEEEECCCCCHHEEECCCEEEEEECCCCHHHHHHHHHHHHHH EKALVVDDSFHLRGMITVKDFQKAERKPNACKDEHGRLRVGAAVGAGAGNEERIAALVEA HHEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRETRAKFPQLQIIGGNVATAAGAKALADAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCEEHHHCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAVAALEGTGIPVIADGGIRFSGDIAKALAAGAACVMV CCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCHHHHHHHHCHHHHHH GSMLAGTEESPGEIELYQGRSFKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE VAYKGRLKEIVHQQMGGLRSCMGLTGCATIDELRTKAQFVRITGSGIQESHVHDVTITKE EEEHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHCCEEEEEEECCCCCCCCEEEEEEEEC SPNYRLGS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]